Geotrypetes seraphini (Gaboon caecilian): 117367195
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Entry
117367195 CDS
T09159
Symbol
TNPO3
Name
(RefSeq) transportin-3 isoform X1
KO
K15436
transportin-3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
gsh03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117367195 (TNPO3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
117367195 (TNPO3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117367195 (TNPO3)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
117367195 (TNPO3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
117367195
NCBI-ProteinID:
XP_033815476
UniProt:
A0A6P8SJI9
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All DBs
Position
9:19585141..19808641
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AA seq
928 aa
AA seq
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MEGKPNLQLVNQAVQALYHDPDPSGKERASFWLGELQRSVHAWEVSDQLLQLRQDVESCY
FAAQTMKMKIQTSFYELPADSHISLRDSLLSHIQNLKDLSPVIVTQLALAIADLALQMAS
WKGCVQTLIEKYSNETSSLPFLLEILTVLPEEVHSRSLRIGANRRSEIIEELSAASSTVV
SLLLNCMEKENEEKMLIKSFRCLGSWFNLGVLNTDVMANNRLLLLLFQVLQRDQTSSNLH
EAASDCVCSALYTIENVESNALANQLFEGVLMLESAYHMAVAREDLDKVLNYCRIFTELC
ETFLEKIVSTPGQGLGNLQTLELLLICAGHPQYEVAEISFNFWYRLGEHLYKTNDAVLHS
IFRAYIQRLLHALARHCQLDPDHEGVPEETDDFGEFRMRVSDLVKDLIFLVGSMECFSQL
YATLKEGNPPWEVTEAVLFIMASIAKSVGPENTPTLVEVLKAVVHMPESVHIAVRYTSIE
LVGEMSELVDRNPQFLDPVLGFLMKGLCEKALASVAAKALHNICTVCRDHMALHFNGLLE
IARSLDSFMLSPDAAVGLLKGTALVLARLPLEKISECLSELCAVQVIALKKLLTQEPSNG
ISSDPTLFLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNKHRADNRVVERCC
RCLRFAVRCVGKGSAALLQPLVTQMVNVYQMHQHSCFLYLGSILVDEYGMEEGCQQGLLD
MLQALCIPTFQLLEQQNGLRNHPDTVDDLFRLSTRFIQRSPIVLLRSQVVIHILQWAIAS
TSLDHRDANCSVMKFLRDLIHTGVANDIMYDVLMQHEENYEMRKDLIRQVLNQMGQQLIS
QLLHTCCFCLPPYTLPDVAEVLWEIMTFDRPTFCRWLENSLKGLPKETSSGAVTVTHKQL
TDFHKQVTSAEECKQVCWALRDFTRFFR
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaaacccaacctgcagctcgtcaaccaggcggtgcaggccctgtaccacgac
cccgacccgagcggcaaggaaagggcctctttctggctgggggagctgcagagatcggtg
catgcttgggaggtgtcagaccaattgctgcagttacggcaggatgtggaatcttgttac
tttgctgcacagactatgaagatgaagattcagacctcattctatgagctccctgcagac
tctcatatttccttgcgagactctttgctttcacatattcagaacttaaaagacttgtca
cctgtcattgtaactcagcttgctttagcaatagcagatcttgctctacagatggcttct
tggaaaggctgtgtgcagacactgattgaaaagtatagtaatgagacaagttcacttccc
ttccttttggagatccttacagtcctgcctgaggaggttcacagtcgatccttacgcatt
ggagccaaccgacggagtgaaattattgaagaactgtctgctgcctccagcactgtggta
tctctccttttgaactgtatggagaaagaaaatgaggagaaaatgctgataaaatcattt
cgctgcctgggcagctggttcaatttgggagtcttgaacactgatgtcatggccaataac
cgtttactattacttctcttccaggttttgcaacgtgaccagacgtcatctaacttgcac
gaagcggcttcagattgtgtgtgctcagcactatatactattgagaatgtggagagtaat
gcccttgccaatcaactatttgagggtgtgttgatgctggagtctgcctaccacatggct
gtggctcgtgaagatttggacaaggtcctaaattattgccgcatttttactgaactctgt
gaaactttcctggaaaaaatagtttcaactcctggccaaggactaggaaatctgcagact
ctggagctgttgctgatctgcgcaggacacccacagtatgaagttgcagaaatttctttt
aacttctggtataggcttggagagcatctgtataaaacaaatgatgcggtgctacatagc
atcttcagagcctatattcagaggcttcttcatgccctggctcggcattgccagcttgat
cctgatcatgagggtgtcccagaggaaacggatgactttggagagtttcgcatgagagtg
tcagacctggtgaaagatttgatcttcctggttgggtctatggaatgcttttctcagtta
tacgccactttgaaagaagggaatcctccttgggaggtgacagaagctgttctcttcatc
atggcctctatagcaaagagtgttggcccggagaacacccccacactggtggaagtcctg
aaggcagtggtgcatatgccagagtcggtgcacattgcggtgagatacaccagcatagag
ctcgtgggagagatgagtgaattggtggacagaaacccccagttcttggatcccgtgttg
ggctttttgatgaagggcctgtgtgagaaggctcttgcctcagttgctgccaaagccctt
cacaacatctgcacggtgtgccgggaccacatggctctgcatttcaatggactgctggaa
attgctcgatctctggattcctttatgctttccccagatgctgcagtgggacttcttaaa
gggacagctttggttcttgcaaggttacccttggaaaagatctctgaatgcctcagtgaa
ctctgcgctgttcaggtcattgcattgaaaaagcttctgactcaggaacccagtaatggc
atctcctcagaccccactctatttttggatcgattagcagttatattcaggcataccaac
cctatagttgaaaatgggcaaacacatccatgccaaaaagtcatacaggagatctggcct
gttctttcggaaacattaaataagcaccgggctgataaccgtgtggtagagcgttgctgc
cgctgtctacgttttgctgtccgctgtgtcggaaaagggtctgcagcactgctgcagcca
ttggtcacacagatggtgaatgtgtatcaaatgcaccagcactcctgtttcctgtacctg
ggcagtatcctagtggatgagtatggtatggaagagggctgtcagcagggcctgctcgat
atgttgcaggctctttgcattcctaccttccagctcttggagcagcagaatggccttcgc
aaccaccctgacactgtggatgacctatttcgtttgtcaaccaggtttatccagcgcagc
cccattgtgctgttgcgcagtcaggtggttatccatattctacagtgggctatcgcttcc
accagcctggaccaccgggatgctaactgcagtgtcatgaaattcctacgtgatcttata
cacactggagtggccaatgatatcatgtacgatgttcttatgcagcacgaagagaactat
gaaatgcggaaagatctaatccggcaggtgctgaatcagatgggtcagcagctgataagc
caactgttgcacacttgctgtttttgtctgcctccatataccctaccagatgtggctgag
gtcctctgggagataatgacctttgaccgaccgacattttgtcgatggctagagaattca
ctgaaaggtttaccaaaagagacatccagtggagcagtaacagtgacacacaaacaactt
acagactttcataagcaggttaccagtgctgaggaatgtaaacaggtgtgctgggccttg
agagattttaccaggttctttcgatag
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