Geotrypetes seraphini (Gaboon caecilian): 117367292
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Entry
117367292 CDS
T09159
Symbol
PUS7
Name
(RefSeq) pseudouridylate synthase 7 homolog isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117367292 (PUS7)
Enzymes [BR:
gsh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
117367292 (PUS7)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
117367292 (PUS7)
Prokaryotic type
117367292 (PUS7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
117367292
NCBI-ProteinID:
XP_033815641
UniProt:
A0A6P8SK60
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Position
9:28166178..28239136
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AA seq
647 aa
AA seq
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METVEITSISLKRPLPEEDQTNDEETKRQKILEPHLAGDPTEKEKQRADDKTEQYMKLEE
EKTASKNEEIDEEVEELDDEDVDTESFADMMKHGLIEFDVGITKFVSSHEGFSGILKERY
SDFVVHEIGKDGNVSYLDDLSVPVDNEDPSDEIFSVLTADEKKHLEELQLFKNKETSFSI
EVVEDTKEKRTVIHQAIKTLFPGLETKTEGRDGKKYIVAYHSAGKKALATPRKHSWPKAR
GSYCHFVLYKENKDTMDAINVLSKFLRVKPNIFSYMGTKDKRAITVQEIAVLKITAQRLA
HLNNCLMNFKLGNFSYKKWPLKLGELQGNLFTVVLRNITGTSEQVQEAMTSLRDIGFINY
YGMQRFGTTAVPTYQVGRVILQSRWNEVVDLILKPRPGAEKGYMVKCREEWAKTKDPDSA
LKKLPVKRCVEGQLLRGLSKYGLKNIISAFGIIPRNNRLMYIHSYQSYVWNNMVSKRIEE
YGLKAVPGDLVLKGATAVAIEEASMNNYTIHDVVMPLPGFDVIYPKHKIGDEYREMLAAD
GLDIDNMRHKIRDYSLAGAYRKIIIRPQNVSWELVVYEDPKVPLVQTDVDKLERKPLPVF
AKEGKYQALKLEFSLPPSTYATMAIREVLKMDTSIKNQTRLNTLWLN
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atggagactgttgaaataacaagcatatccctaaaacggccccttcctgaggaagaccaa
actaatgatgaagaaactaagcgtcaaaagatcttagaaccgcatttggcaggagatcca
acagagaaagaaaagcagagagcagatgataagactgagcagtacatgaaactagaggaa
gagaaaactgctagcaaaaatgaggaaattgatgaagaagttgaggagctggatgatgaa
gatgtcgacactgagagcttcgcagacatgatgaagcacgggttgatagaatttgatgtt
ggcattacaaaatttgttagttctcatgaagggttttctggaattctaaaggaaagatat
tcagactttgttgtccatgaaataggaaaagatggcaatgtaagctatttagatgactta
tctgttccagtagataatgaggatccctcagatgaaattttttcagtcctgacagctgat
gaaaaaaagcatttggaagaacttcaacttttcaagaacaaggaaactagtttttctata
gaggttgtagaagacaccaaagaaaagagaacagttatccatcaagctataaagaccttg
ttccctgggttagagacaaaaactgaaggccgagatggaaaaaagtacattgtagcatac
cattcagctgggaaaaaggcattggcaacaccaagaaaacactcctggccaaaagcacgg
ggaagctattgccattttgtactctacaaggagaacaaagataccatggatgctattaat
gtgctatccaaatttttacgagttaaaccaaacatattttcttatatggggaccaaagat
aaaagggctattacagtacaggagattgctgttctgaaaatcactgcacaaagacttgct
catttaaacaactgtttaatgaacttcaaacttggaaacttcagctacaagaagtggcca
ctgaaactgggagaattgcaaggaaatctcttcacggtagtcctcaggaatataacagga
accagtgaacaagttcaggaggcaatgacatctctcagggatatcggatttattaactac
tatggaatgcagaggtttggtactacagctgtacctacatatcaggttggaagagtgatt
cttcaaagcagatggaatgaagtggtggatttaatattaaaaccacggcctggagctgaa
aaaggatatatggttaaatgcagagaagaatgggccaaaaccaaagatccagattcggct
ctcaagaaactgcctgtgaaaagatgtgtggaggggcaactactgcgaggactttccaag
tatggattgaaaaatattatctcagcatttggcataattcccaggaataatcgtttgatg
tacattcatagctatcagagttatgtgtggaataatatggtgagcaagagaattgaagaa
tacggtctaaaagctgttccaggggatcttgtgcttaaaggagcaaccgctgttgcaatt
gaagaagccagcatgaacaactataccatccatgatgttgtgatgccattgcctgggttt
gatgttatctatccaaagcataaaattggtgatgaatacagagaaatgcttgcagctgat
ggtcttgacattgataacatgagacacaagatccgagattactcattagctggagcatac
agaaagatcatcattcgacctcagaatgtcagctgggaactggttgtatatgaagatcca
aaagttccattagttcagactgacgtggacaagctggaaagaaagccactacctgttttt
gccaaagaggggaaatatcaagccctgaagttggaattctcccttcctccttccacttat
gcaacaatggccattcgagaagtgttgaaaatggacacaagtatcaagaaccaaactcgg
ctaaacacattgtggctgaactga
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