Geotrypetes seraphini (Gaboon caecilian): 117367301
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Entry
117367301 CDS
T09159
Symbol
MKRN1
Name
(RefSeq) E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117367301 (MKRN1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117367301 (MKRN1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117367301 (MKRN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-RING_UBOX
zf-C3HC4
zf-CCCH_3
zf-RING_2
zf-RING_5
zf-rbx1
zf-C3HC4_4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
117367301
NCBI-ProteinID:
XP_033815655
UniProt:
A0A6P8SAR9
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All DBs
Position
9:complement(85617656..86170569)
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AA seq
472 aa
AA seq
DB search
MAEEEVVLSVSTVAVSACVTAVQHSATSVTAATTVTSTTRAVTAPINPSNGGWTRHVTCR
YFIHGVCKEGNNCHYSHDLSTSQSTMICWYYQRGCCAYGSNCRYKHTEALNQELPAMKTL
SFSSPDSISHPDTSCGLTKEANSNLGVATPCIKDWVNAVEFVPGQPYCGRAAACFLETPV
HDPVIEEGQCEKQLSCLESKKELCPYAAVGECRYGENCVYLHGDICDMCGLQVLHPVDAA
QRSQHIKSCIDAHEKDMELSFAVQRSKDMACGICMEVVYEKANPSERRFGILSNCSHTYC
LKCIRKWRSAKQFESKIIKSCPECRITSNFVIPSEYWVEEKEEKQKLIRKYKEAMSKKSC
RYFDEGRGSCPFGGNCFYKHAYPDGRLEEPQPRQKGTSSRYRTQRRNHIWDLIEDREGNN
FFGNDEDDMVTFELGEMLLMLLAAGTDDDLTDSEDEWDLFHEELDDYYDSDL
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggaagaggtagttcttagtgtttcaacagtagcggtctcagcctgtgttact
gctgtccaacactctgccacttcagtaacagcagcaacaaccgtaacatcaacaaccaga
gcagtgactgcaccgattaatccttctaatggaggctggacccggcatgtaacttgcagg
tatttcatccatggggtatgcaaggaaggaaacaactgtcattattctcatgacctctct
accagccagtccaccatgatctgctggtactatcaacgagggtgctgtgcttatggaagt
aactgcaggtacaagcatacagaagctttgaatcaagaactgcctgctatgaagaccttg
tccttctcttcacccgactctatatcacaccctgacacaagctgtggtttaacaaaagag
gcaaattctaatctaggagttgccactccatgtattaaagactgggtgaatgctgtagaa
tttgttccgggacaaccttactgcggacgtgctgctgcatgctttcttgaaactcctgta
catgacccagtgattgaagagggacaatgtgagaagcagctgtcatgcttggaatcgaag
aaagaactctgtccctatgctgctgtgggagaatgtcgttacggcgagaactgtgtatat
ctccatggtgatatatgtgacatgtgtgggctgcaggtgcttcatcctgtggatgctgct
cagagatctcaacacataaagtcttgtattgatgcacatgagaaggacatggaactatca
tttgcagtacagcgaagtaaagacatggcatgtgggatctgcatggaagtggtgtatgag
aaggccaaccctagtgaacgccgtttcgggatcctttccaattgtagccacacatactgc
ctcaagtgtatccgcaaatggaggagtgctaagcagtttgagagcaagatcataaagtcc
tgcccagaatgccgaatcacctccaattttgttattccaagtgagtactgggtggaggag
aaggaagagaagcagaaactcattcggaaatacaaagaggcaatgagcaagaagtcctgc
aggtattttgatgaagggcgtggaagttgcccttttggagggaattgtttttataaacat
gcttatcctgatggccgtcttgaggagccacagccacgacagaaaggaacatcaagcaga
tatcggactcagaggaggaaccacatttgggacttgatcgaggatcgagagggcaataat
ttctttggaaacgatgaggatgatatggtgaccttcgagctaggcgaaatgctgctcatg
ctgttggcagcaggcactgatgatgatctcacagactcagaagatgaatgggacttgttt
catgaggaactggatgattattatgactcggatctatag
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