Geotrypetes seraphini (Gaboon caecilian): 117367377
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Entry
117367377 CDS
T09159
Symbol
LRRC4B
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecule (CAM) interaction
gsh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117367377 (LRRC4B)
04517 IgSF CAM signaling
117367377 (LRRC4B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117367377 (LRRC4B)
Cell adhesion molecules [BR:
gsh04515
]
Immunoglobulin superfamily
NGL family
117367377 (LRRC4B)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
LRR_1
LRR_9
ig
V-set
Ig_2
VEGFR1-3_N_Ig-like
LRRNT
LRR_RPS2
DUF7617
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117367377
NCBI-ProteinID:
XP_033815722
UniProt:
A0A6P8SBV8
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All DBs
Position
10:120538282..120673157
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AA seq
638 aa
AA seq
DB search
MATHRCSHRILEQELFRMVWKLTVLILWLSSLALGGTSPTSCPASCSCSNQASRVVCTRR
ELVEVPESISVNTRYLNLQENNIQVIKTDTFKHLRHLEILQLSKNLIRMIEVGAFNGLPN
LNTLELFDNRLTTVPTQAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLRRLDLGELKKL
EYISEAAFEGLVNLRYLNLGMCNLKDIPNLTALVRLEELELSGNRLEMIRPGSFQGLTSL
RRLWLMHAQVAIIERNAFDDLKSLEELNLSHNNLMSLPHDLFTPLHRLERVHLNHNPWHC
NCDVLWLSWWLKETVPNNTTCCARCHSPPNLKGRYIGELDQSHFTCYAPVIVEPPTDLNV
TEGMAAELKCRTGTSMTSVNWLTPNGTLMTHGSYRVRISVLHDGTLNFTNVTVQDTGQYT
CMVTNSAGNTTASATLNVSAADPSATGYTYFTTVTVETMETIQDELKPSEKEPGPTPGWE
ITYSTTSLTPHSTRSTERTFTIPITDITEDIMKDLDDVMKTTKIIIGCFVAITFMAAVML
IVFYKLRKQHQLHKHHGPTRTIEIINVEDEIPTSNPGDNHLALPAIEHDHLNHYTAFKAH
YNNNTGTLNCAKNPILNSIHEPLLFKSTSKENVQETQI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggccacccaccgctgcagccacaggatactggagcaggagctctttagaatggtttgg
aagttgaccgtgttaatcttgtggttatcatcactggcactgggagggacctcacctact
tcttgtccagcctcttgttcctgtagtaaccaggccagtcgtgtggtttgcactcgtcgg
gaactggtggaggtgccagagagcatctctgtgaacacaagatacctgaatctccaggag
aataatattcaggtcatcaagactgacacattcaagcacttacgccacctggaaatcttg
cagctcagcaagaatttaatccgtatgattgaggtaggagctttcaatggactgcccaat
ctgaacactctggagctttttgataatcgcttaaccactgtccccacccaagcttttgaa
tacctttccaagctacgggagctgtggctgaggaataaccccattgaaagtatcccatca
tatgccttcaatcgtgttccgtctcttcggagacttgacttgggggaactgaagaagctg
gagtatatttcagaagctgcctttgaaggacttgtaaatctaaggtatcttaatttgggt
atgtgcaacttgaaagatatacccaacctgactgcactggtgaggttggaagagctagaa
ttatcagggaaccgactagaaatgattcggcctggctcattccagggcctgaccagtctt
cggaggctatggctaatgcacgctcaggtggccatcattgaacgtaatgcttttgatgac
ctgaaatctttagaggaactcaatctgtcacacaataatcttatgtcccttcctcatgac
ttattcacacccttgcacagactggagcgggtacacctaaaccacaacccttggcactgt
aactgtgatgtgctatggttgagttggtggttgaaagagacggtaccaaacaacactacc
tgctgtgcacgctgccactccccacccaacttaaagggtcgttacatcggagagctggat
cagagtcatttcacttgctatgcccccgtcattgtggaaccccccacagacctcaatgta
acagaaggcatggctgctgagttgaaatgccggacagggacctcgatgacctctgttaat
tggctaacgccaaatggaaccctaatgacccatggatcctaccgggtccgtatttcggtc
ttgcatgacggtacactaaacttcacaaatgttaccgtgcaggacactggccagtataca
tgcatggtaaccaactcagcgggaaacaccaccgcatcggcaacgcttaatgtgtctgca
gcagacccctctgccactggatacacctattttacgacagttactgtggaaaccatggaa
actatccaggatgaattgaagccctcagagaaagagccaggtccaacccctggatgggaa
ataacctattcgaccacatcactaacacctcacagcacccggtcaactgaaagaaccttc
accattcccatcacagacatcactgaagacatcatgaaagatctggatgatgtgatgaag
accacaaaaatcataattggctgctttgtggccattactttcatggcagcagtcatgctg
attgttttttacaaactgcgcaagcaacatcagctgcacaagcaccatggcccgactagg
accatagaaatcatcaacgtggaagatgagatccccaccagcaacccaggagataatcac
ttagcactgccggccattgaacacgaccacctcaaccattacaccgccttcaaggcccac
tataacaacaacacaggcaccctgaactgtgccaaaaaccctatcctcaactccatccat
gaacctctgctcttcaagagcacttccaaggagaacgtgcaagagacacagatctag
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