Geotrypetes seraphini (Gaboon caecilian): 117367378
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Entry
117367378 CDS
T09159
Name
(RefSeq) RNA binding protein fox-1 homolog 3-like isoform X1
KO
K14946
RNA binding protein fox-1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117367378
Spliceosome [BR:
gsh03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117367378
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Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
117367378
NCBI-ProteinID:
XP_033815725
UniProt:
A0A6P8SAX8
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All DBs
Position
10:complement(120443911..120490359)
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AA seq
395 aa
AA seq
DB search
MDKFKPEPSVLQSCPELPIIYTVNRYCVSFRRGGKSPWNESHQGSQEAAPSADALSQTYP
AQYPPPPPQPRLPPPYHPVHHHSSSQEYPVPAITEHGIQIYPPSQPHPDLNQNVDPGVAG
LPLPSTRPDDSSQPNVPLQPQGPESDDNNPAPKRLHVSNIPFRFRDPDLRQMFGQFGKIS
DVEIIFNERGSKGFGFVTFENSADADRAREKLNGTIVEGRKIEVNNATARVVTKKPQPSV
VNGWKINPVVGAVYAPDLYTVASIPYPVVAPALAYRGAHLRGRGRAVYSTIRAGTAASSP
VPAYGSVLCQDGVYTTDMYGYTTYRVAQPQAAATAYSDGQVSIEGVTAASHLIEDQPPPG
WGFVDMATAVLKKTRGEVLRTHLAVYHWTSLSTSL
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atggacaaattcaaacctgagccttctgttctgcagagttgtccagaattacccataatt
tatacagtaaatagatattgtgtgtcattcagaagaggtggtaaatccccatggaatgag
agtcatcagggcagccaggaggctgcgccctcagcagatgcgctatcacagacgtatccg
gctcagtatcctcctcccccacctcagccacggcttccaccaccttaccacccagttcat
caccatagcagcagccaggagtatccagtgccagccataacagagcacggtatacagatc
tatccaccgagtcagccacatccggacctgaaccaaaacgtagaccctggcgtggcagga
ctacccctgccttcaacacgaccagatgactcatcacagcccaatgtccccctccagcct
cagggtcctgagagtgatgacaataatccagcacccaagcgtctgcacgtttccaacatc
cccttccgcttccgagatccagacctgcgccagatgtttgggcaatttggaaaaatatcg
gatgtggaaataatcttcaatgagcgtggatcaaagggctttgggtttgtgacctttgag
aacagtgccgatgcagaccgagcccgagagaagctgaacggcaccatcgtggagggccgg
aagatagaggtgaataatgcaacagctcgggttgtcaccaagaagccacagccctcagta
gtaaacggatggaaaataaacccagtcgtcggtgctgtgtatgctccggacctttacaca
gtggccagtatcccatacccagtcgttgcccctgccttggcgtacagaggagcacatctg
aggggccgcggaagagccgtgtacagcacgattcgagcagggacagcagcgtcatctccg
gtcccagcctacggaagtgtgctctgccaggatggtgtgtacactactgatatgtatggt
tacacaacctatcgtgttgcgcagccacaagcagcagcgacggcgtacagtgacgggcaa
gtctctatcgagggggttacagccgcttcacaccttattgaggaccaaccacctcctggt
tggggtttcgttgacatggccacagctgtcctcaaaaaaacaagaggggaagttttaaga
acgcatttagcggtttaccattggacctctctttcaacttccctgtaa
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