Geotrypetes seraphini (Gaboon caecilian): 117367473
Help
Entry
117367473 CDS
T09159
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
117367473 (TRIM25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117367473 (TRIM25)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117367473 (TRIM25)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
117367473 (TRIM25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-B_box
Baculo_IE-1
DASH_Duo1
DUF7217
Motif
Other DBs
NCBI-GeneID:
117367473
NCBI-ProteinID:
XP_033815920
UniProt:
A0A6P8SBB6
LinkDB
All DBs
Position
10:21188594..21259579
Genome browser
AA seq
689 aa
AA seq
DB search
MAEARRSLNELAEELTCPICLGTFATPVTIPCGHNFCHLCLSLTWKAGAATYHCPQCRQS
FFPKPELKKNTVLAGVVERFQQAYEEEQVEEEEEVQEEAEAGDKEQQLLPGGPVTCDHCL
QAPAVRTCLTCMVSFCQEHLRPHLESLAFCDHQLRQPLCDLQQKKCPEHAKLLEYYCFGH
GQCICCICLVQHKTCPTSSVQDARTKQQISLKKQLGTLNEKIEKVTSSLADVETKQNNVE
NVAERKKALLREEFSEIKDLIEKEEEEIMKRVASEEQRVKQKFKITHNALLKKNLEYERL
QGHLEHLLSEDEEITFLKNAAKLKNTMTKDPFVPYIDFNQKLLQALYKRSFSLKEAIKSA
VQPPSAGPDDSSLLGENPPPPNHPFRNAPPSAGERPVRFCSPPPPLMQFPPPAAGKQKIG
AVERPVLFGFPAPPLMEFPPPAAGKQKLGAGERPEQQFPPAPNPPPAGKQKPGPDAGLHK
KPPPKANPGAKNPSTPGPASDVHSKSRQELLQYAEKLCLDVNTAHKRVVLSDNYTQISVT
DIPQNYSDNPQRFTHCSQVLCQQGFYKGIHYWEVGIQNSTFCAIGIAYKNIDKKGTDSRL
GRNKVSWCVEWFNAKLSAWHNDLEEILPNPNPSKIGVLLNCDEGYVAFYSVTKKKNTLLY
KFQAQFTQQVYPAFWVFSSNTTLSLCQLK
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggcccgcaggtccctgaacgagctggccgaggagctcacctgccccatctgc
ctgggcaccttcgccacccccgtcaccatcccgtgcggccacaacttctgccacctctgc
ctgagcctgacttggaaggcgggggcggcgacttaccactgcccccagtgccgccagagc
ttcttccccaagcccgagctgaagaagaacacggtgctggccggggtggtggagcggttc
cagcaggcgtatgaggaagagcaggtggaggaggaggaagaggtgcaggaagaggcggag
gcgggggacaaagagcagcagctgctgccggggggtccggtgacctgcgaccattgcctg
caggcgcccgctgtccgcacctgcctgacctgcatggtgtccttctgccaggagcacctg
cggccccacctggagagcctggccttctgcgaccaccagctgcgccagccgctgtgcgac
ctgcagcagaagaaatgccccgagcacgccaagctgctggagtactactgcttcgggcac
ggccagtgcatctgctgcatctgcctggtccagcacaagacctgcccgaccagcagcgtc
caggatgccagaaccaagcagcagatcagtctgaaaaagcaattgggaaccttgaatgag
aagattgaaaaggttaccagttcgttagctgacgtggaaaccaagcagaataatgtggaa
aatgtggccgagaggaagaaagctcttctgagagaagaattctccgagatcaaagacctg
attgagaaagaggaggaagagattatgaaaagagtggcaagcgaggagcagcgagtgaag
cagaagtttaaaatcactcacaatgctttacttaagaaaaatcttgaatatgaaaggtta
caagggcatctggagcatttgctaagcgaagacgaggaaatcacttttctgaagaatgca
gcaaagctgaaaaacacgatgacgaaagatccttttgtgccgtatattgattttaaccaa
aaattattgcaagcactgtacaaacgttctttttcacttaaagaagccataaaaagtgca
gtacagccaccgtcagcgggaccagatgattcttctttgctaggtgaaaaccctccacct
ccgaaccatccttttcgaaacgcacctccatctgctggtgaacgacctgtgcgattttgt
tcaccacctccacctctcatgcaatttcctcctccagctgctggtaaacagaagataggg
gcagttgaacgacctgtgctgtttggtttcccagctccacctctcatggaatttcctcct
ccagctgctggtaaacagaagttaggggcaggtgagcgaccagagcagcaatttccccct
gctccaaaccctccacctgctggtaaacagaagcctgggccagatgcaggactgcataaa
aaacctcccccaaaagctaatcctggagccaagaacccttcaacacctggaccagcctca
gatgttcattcaaaatccagacaagaacttcttcaatatgctgagaaactctgcctagat
gtcaacacggcacacaagagggtggttttgtctgataactacactcaaatttcagtcacc
gacatacctcaaaattacagcgataacccgcagcggtttacccactgctcccaggtgctg
tgccagcagggtttctacaagggcatccactactgggaagtaggtatacagaacagcact
ttctgtgcaattgggatcgcctacaagaatatcgacaagaaaggaacggacagccgattg
ggaagaaacaaagtgtcttggtgcgttgaatggttcaatgccaaactctcagcttggcat
aatgacttggaagagatcttgcccaaccccaaccccagcaagattggggtcttgctgaac
tgtgatgaagggtatgtggctttctattcggtcaccaagaagaagaacaccctgttgtac
aaatttcaagcgcagttcactcagcaagtctaccctgccttctgggtgttctccagcaac
acaaccttatcgctctgccagctaaaatga
DBGET
integrated database retrieval system