KEGG   Geotrypetes seraphini (Gaboon caecilian): 117367473
Entry
117367473         CDS       T09159                                 
Symbol
TRIM25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
  KO
K10652  tripartite motif-containing protein 25 [EC:2.3.2.27]
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04622  RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    117367473 (TRIM25)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:gsh04121]
    117367473 (TRIM25)
Enzymes [BR:gsh01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     117367473 (TRIM25)
Ubiquitin system [BR:gsh04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    117367473 (TRIM25)
SSDB
Motif
Pfam: PRY SPRY zf-C3HC4_4 zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 ANCHR-like_BBOX RING_XB3-XBAT31 zf-B_box Baculo_IE-1 DASH_Duo1 DUF7217
Other DBs
NCBI-GeneID: 117367473
NCBI-ProteinID: XP_033815920
UniProt: A0A6P8SBB6
LinkDB
Position
10:21188594..21259579
AA seq 689 aa
MAEARRSLNELAEELTCPICLGTFATPVTIPCGHNFCHLCLSLTWKAGAATYHCPQCRQS
FFPKPELKKNTVLAGVVERFQQAYEEEQVEEEEEVQEEAEAGDKEQQLLPGGPVTCDHCL
QAPAVRTCLTCMVSFCQEHLRPHLESLAFCDHQLRQPLCDLQQKKCPEHAKLLEYYCFGH
GQCICCICLVQHKTCPTSSVQDARTKQQISLKKQLGTLNEKIEKVTSSLADVETKQNNVE
NVAERKKALLREEFSEIKDLIEKEEEEIMKRVASEEQRVKQKFKITHNALLKKNLEYERL
QGHLEHLLSEDEEITFLKNAAKLKNTMTKDPFVPYIDFNQKLLQALYKRSFSLKEAIKSA
VQPPSAGPDDSSLLGENPPPPNHPFRNAPPSAGERPVRFCSPPPPLMQFPPPAAGKQKIG
AVERPVLFGFPAPPLMEFPPPAAGKQKLGAGERPEQQFPPAPNPPPAGKQKPGPDAGLHK
KPPPKANPGAKNPSTPGPASDVHSKSRQELLQYAEKLCLDVNTAHKRVVLSDNYTQISVT
DIPQNYSDNPQRFTHCSQVLCQQGFYKGIHYWEVGIQNSTFCAIGIAYKNIDKKGTDSRL
GRNKVSWCVEWFNAKLSAWHNDLEEILPNPNPSKIGVLLNCDEGYVAFYSVTKKKNTLLY
KFQAQFTQQVYPAFWVFSSNTTLSLCQLK
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggccgaggcccgcaggtccctgaacgagctggccgaggagctcacctgccccatctgc
ctgggcaccttcgccacccccgtcaccatcccgtgcggccacaacttctgccacctctgc
ctgagcctgacttggaaggcgggggcggcgacttaccactgcccccagtgccgccagagc
ttcttccccaagcccgagctgaagaagaacacggtgctggccggggtggtggagcggttc
cagcaggcgtatgaggaagagcaggtggaggaggaggaagaggtgcaggaagaggcggag
gcgggggacaaagagcagcagctgctgccggggggtccggtgacctgcgaccattgcctg
caggcgcccgctgtccgcacctgcctgacctgcatggtgtccttctgccaggagcacctg
cggccccacctggagagcctggccttctgcgaccaccagctgcgccagccgctgtgcgac
ctgcagcagaagaaatgccccgagcacgccaagctgctggagtactactgcttcgggcac
ggccagtgcatctgctgcatctgcctggtccagcacaagacctgcccgaccagcagcgtc
caggatgccagaaccaagcagcagatcagtctgaaaaagcaattgggaaccttgaatgag
aagattgaaaaggttaccagttcgttagctgacgtggaaaccaagcagaataatgtggaa
aatgtggccgagaggaagaaagctcttctgagagaagaattctccgagatcaaagacctg
attgagaaagaggaggaagagattatgaaaagagtggcaagcgaggagcagcgagtgaag
cagaagtttaaaatcactcacaatgctttacttaagaaaaatcttgaatatgaaaggtta
caagggcatctggagcatttgctaagcgaagacgaggaaatcacttttctgaagaatgca
gcaaagctgaaaaacacgatgacgaaagatccttttgtgccgtatattgattttaaccaa
aaattattgcaagcactgtacaaacgttctttttcacttaaagaagccataaaaagtgca
gtacagccaccgtcagcgggaccagatgattcttctttgctaggtgaaaaccctccacct
ccgaaccatccttttcgaaacgcacctccatctgctggtgaacgacctgtgcgattttgt
tcaccacctccacctctcatgcaatttcctcctccagctgctggtaaacagaagataggg
gcagttgaacgacctgtgctgtttggtttcccagctccacctctcatggaatttcctcct
ccagctgctggtaaacagaagttaggggcaggtgagcgaccagagcagcaatttccccct
gctccaaaccctccacctgctggtaaacagaagcctgggccagatgcaggactgcataaa
aaacctcccccaaaagctaatcctggagccaagaacccttcaacacctggaccagcctca
gatgttcattcaaaatccagacaagaacttcttcaatatgctgagaaactctgcctagat
gtcaacacggcacacaagagggtggttttgtctgataactacactcaaatttcagtcacc
gacatacctcaaaattacagcgataacccgcagcggtttacccactgctcccaggtgctg
tgccagcagggtttctacaagggcatccactactgggaagtaggtatacagaacagcact
ttctgtgcaattgggatcgcctacaagaatatcgacaagaaaggaacggacagccgattg
ggaagaaacaaagtgtcttggtgcgttgaatggttcaatgccaaactctcagcttggcat
aatgacttggaagagatcttgcccaaccccaaccccagcaagattggggtcttgctgaac
tgtgatgaagggtatgtggctttctattcggtcaccaagaagaagaacaccctgttgtac
aaatttcaagcgcagttcactcagcaagtctaccctgccttctgggtgttctccagcaac
acaaccttatcgctctgccagctaaaatga

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