Geotrypetes seraphini (Gaboon caecilian): 117367678
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Entry
117367678 CDS
T09159
Symbol
CACNA1B
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04010
MAPK signaling pathway
gsh04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
117367678 (CACNA1B)
04020 Calcium signaling pathway
117367678 (CACNA1B)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gsh04040
]
117367678 (CACNA1B)
Ion channels [BR:
gsh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
117367678 (CACNA1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
EGF_Hmr-1
Motif
Other DBs
NCBI-GeneID:
117367678
NCBI-ProteinID:
XP_033816360
UniProt:
A0A6P8SCJ4
LinkDB
All DBs
Position
10:complement(91996187..93467829)
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AA seq
2329 aa
AA seq
DB search
MARFGDDLPTRYGGGGPAGGGRGSSRQGGPPAGQRMYKQTMAQRARTMAMYNPIPVKQDC
FTVNRSLFIFSEDNIIRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPEEDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILATTGTDFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAIVMFAIIGLEFYIGK
FHKACFSKTTDERVGDFPCGEDISARKCENGTECREYWKGPNFGITNFDNIFFAILTVFQ
CITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENR
RAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAATKKSKNDLI
HAEEGEDHFTDICSVGSPFARASLKSGKNESSSYFRRKEKMFRFFIRRMVKAQSFYWFVL
CVVALNTLCVAIVHYGQPQLLTDALYFAEFVFLGLFLTEMSLKMYGLGPRNYFHSSFNCF
DFGVIVGSIFEVIWAAVKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSLLNSMKSI
VSLLFLLFLFIVVFALLGMQLFGGQFNFKDETPTNNFDTFPDAILTVFQILTGEDWNAVM
YHGIESQGGVSRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEEELEEAT
NQKLALQKAKEVAEVSPISAANISIAAFVKQTRSAVSRSSSISSVNSPKQQNSVKSKSVW
EQRTTQIRMHNFRASCEALYNELDPEERVRYATTLHIRPDMKTHLDRPLVVEPRADDKGQ
ESEQGKGSSAESATEPPRKHHRHREKPGEGALDNGGEPGSGNREERHRQHRSRSKEAEGS
GGSKEGKNDRNRSQERTKRHHRQSSMEEGTTAPEREHRRHRMHRHSAERQPKEGNGTISG
GVKSERRARHRGGSRSGHRETDNGEEPPRRHKTRHKALSTYEGDESGAKEHRNHQSNREN
PSEPEAGTMSVPGGPMTTGLQQVPEQPEDADNQKNVNRMTQPPPDKTDTVNVPVTITAPP
GDISVIPMNNIDYETKTEEKKGIEIDDLTKNGPKQILPYSSMFIFSSTNPMRRLCHYIVN
LRYFEMVILMVIALSSIALAAEDPVQSDAPRNDVLKYMDYIFTGVFTFEMVIKMIDLGLL
LHPGAYFRDLWNILDFIVVSGALVAFAFSGNKGKDINTIKSLRVLRVLRPLKTIKRLPKL
KAVFDCVVNSLKNVLNILIVYMLFMFIFAVIAVQLFKGKFFYCTDKSKELERDCRGQYLD
YEKDEVEAQPRLWKKYEFHYDNVLWALLTLFTVSTGEGWPNVLKHSVDATYEDQGPSPGF
RMEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAKP
LTRYMPQNKQSFQYKMWKFVVSPPFEYFIMVMIALNTIVLMMKFYGSRDSYDLMLKGLNI
LFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIANNFINLSFLRLF
RAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALDDET
AINRHNNFQTFLQALMLLFRSATGEGWHEIMLACLSNQPCDERSGLTKDECGNDFAYFYF
VSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYIRVWGEYDPAACGRIGYTD
MYEMLRHMSPPLGLGKKCPARVAYKRLVRMNMPISDQDLTVHFTSTLMALIRTALDIKLA
SGGVNQHQRDAELRKEISSVWPNLSQKTLDLLVPPHKPDEITVGKVYAALMIFDFYKQNK
NSRDQSHQQPGNLSQTGALSLFHPLKATLEQALPGPFGNAKMFLRQKSSASLNNGGALPN
QESGIRESSSWGAHRAPDALYETKTPTFERGHSEEIHLEQTCKQSVEMKEMGPNISGGDH
QPDLESQGRAASMPRLAAETQPIPDSSPMKRSISTLTPQQQRPRSMHLYEYSLERVPPDR
THHHHHHRCHRRKEKKQKSLERSPPQQDDADTATTNDFALAQPGEVSSKEKRQERGRSQE
RKQYSSSSSEKQRFYSCDRYGSRDHSQPKSSDRSRPTSPNGGQEQGHNRQGSGSVNGSPL
LLTSGASTPCRGRRQLPQTPLTPRPSITYRTANSSPVHFSASQTILPAFSPGRLSRGLSE
HNTLLRGDSQNHAHVLVARIGSDPSLGHRDDCDNSFRVLLEDPLTYEEALATNSGRSSRT
SYVSSMTSQSHQIRRVPNGYHYTLGLSTGAGTSMRGRGHYHEAQEDDWC
NT seq
6990 nt
NT seq
+upstream
nt +downstream
nt
atggctcgattcggagacgacctgccgactcgctacggcggtggaggaccggctggcgga
gggagagggagcagcaggcagggtggccccccagccggccaaaggatgtacaagcaaacg
atggctcagagagcccgcaccatggcgatgtacaacccgattccggtcaagcaggactgc
ttcacagtcaacagatctctcttcatcttcagcgaagataacattatacggaaatacgcc
aagagaataacagaatggcctccatttgaatatatgattttagctaccattattgccaac
tgtattgttttggctttggaacagcatttgcctgaagaagacaagacgccaatgtcagaa
cgactggatgacacagaaccatactttattggaatattttgctttgaagctggtataaag
atcatcgctttaggatttgtttttcataaaggctcctaccttcgaaatgggtggaacgtg
atggattttgttgttgtactaacagggattttagccactactgggacagattttgactta
cggaccttgagggcagtcagagtgctgagaccactaaagcttgtatcaggaattccaagt
ttacaggttgtcctcaagtccataatgaaggccatggtgcctttgctacagatagggctg
cttttgtttttcgccattgtaatgtttgccataattgggcttgaattctacattgggaag
ttccataaagcctgcttcagtaaaaccacagacgaacgagtaggagacttcccttgtgga
gaagacatttcagcaagaaagtgtgagaatggaactgaatgccgggaatactggaaaggc
cccaactttggaatcaccaactttgataatattttttttgctattctcactgtcttccaa
tgcatcaccatggagggctggacagacatcctctacaatacaaatgatgcagcaggaaac
acctggaactggctttatttcattcccctcattatcattggatctttcttcatgctcaac
ctggtgcttggtgtcctatcaggtgagtttgccaaagaacgagagcgagttgaaaatcgc
cgcgccttcctcaaacttcgcaggcagcaacagattgagcgagaactgaatggatacctg
gagtggatctttaaagctgaagaagttatgttggctgaagaagacaagaatgcagaagag
aagtcacctttagatgtgctgaagagagctgcgaccaagaaaagtaagaatgatctgatc
cacgctgaggagggtgaagatcacttcacagatatctgttctgttggatctccatttgct
cgagccagcttgaaaagcgggaagaatgaaagctcctcctacttccgcagaaaggaaaag
atgtttcgcttcttcatacggcggatggtaaaagcgcagagcttctactggtttgtcctc
tgcgtggttgcactgaatacactgtgcgtcgccatagtgcactatggccagccacagctg
ctgactgatgccttatattttgcagaatttgttttcctggggcttttcctgactgaaatg
tccttgaagatgtatggcctggggccaaggaattacttccactcatccttcaattgcttt
gactttggggttattgtgggaagtatttttgaagtgatctgggccgcagttaagccaggc
acctcttttgggatcagcgtgctgagagccctccgacttctgaggattttcaaagtcaca
aagtactggaactcccttcggaatctggtggtgtcccttctgaactccatgaaatctatt
gtcagtttgctgttcctgctttttctcttcattgtagtgttcgccttgttggggatgcag
ctgttcggtggacagtttaattttaaagatgaaacaccaacaaacaactttgacaccttt
cctgatgccattctcactgtatttcagatcctaactggtgaagattggaacgcagtgatg
taccatggcattgagtcacagggaggtgtcagcagagggatgttctcttccatttacttc
atcgtcttaacattgtttggaaattacacacttctgaacgtcttcctggccatcgctgtt
gacaatctcgcaaatgctcaagagctgacaaaggatgaagaggagctggaagaagcgaca
aatcagaaacttgctctccaaaaggccaaggaagtggcagaagttagccccatatcagca
gcgaacatttctatagcagcttttgtaaagcaaactcgaagtgccgtgtctcgcagctcg
tccatctccagcgtaaattcacccaagcagcaaaactctgtgaaatccaaatcagtctgg
gagcagaggacaactcagattcgaatgcacaacttcagggcgagctgtgaggcattgtat
aatgagctagacccagaggagcgggtcagatatgccaccaccttgcacattcggcccgat
atgaaaacccacctggaccggcccctagtagtggaacctcgggctgatgacaaaggacag
gaaagcgagcagggcaagggttcatcagctgagagtgccacagagccaccgcgtaaacac
caccgacaccgagagaagccaggtgaaggagccctggacaatggtggggagccaggtagt
gggaatcgtgaagagcgacacaggcagcaccggagtcgcagcaaagaggcagagggcagt
ggtggcagtaaggaagggaagaatgatcgcaaccgaagtcaagagcgaaccaagaggcac
caccggcagagctccatggaggagggaacaacagcaccagagagagagcaccgacggcat
cgcatgcaccggcattcagctgaaaggcagcccaaggaggggaatggcaccatcagtggt
ggggtcaaaagtgagaggcgggcgcggcaccgaggaggctcacgttcaggccacagagag
acagataatggagaggagcccccccggcggcacaaaacccggcacaaagcactctctacc
tatgaaggtgatgaatctggagccaaggagcacaggaaccaccagtccaacagagagaat
ccatctgagccagaagctggaacaatgagtgtacctggaggtcctatgaccactggcctg
caacaagtacctgaacagccagaagatgctgacaaccagaaaaatgtgaacagaatgaca
cagccgcctccagacaagaccgacactgtgaacgttcctgtcaccatcacagcaccccca
ggggacatctctgtcataccaatgaataatattgattatgaaactaaaacagaggagaag
aagggcatagagattgatgacttaacgaaaaatggtccaaaacaaatcctgccttacagt
tccatgttcatctttagctccaccaaccccatgcgtcgcctgtgccattacattgtgaat
ctccgttattttgagatggtcatcttgatggttatagccctgagtagtattgctctagct
gcagaggatccagttcagtctgatgcaccacgaaatgatgttctaaaatatatggattac
atattcacgggcgtctttacctttgagatggtgataaagatgattgatctgggactcttg
cttcatcctggtgcctacttccgagacctgtggaatatcttggatttcattgtggttagc
ggtgcgctggttgcttttgcattttcaggaaacaaaggcaaagacatcaacacaatcaag
tctctccgggtcctcagagtcttacggccgctgaagacgatcaaacgtttaccaaaactc
aaggcagtctttgattgtgtggtgaattctttaaagaatgtcctcaatatcctgattgtt
tacatgctcttcatgttcatttttgctgttattgctgtgcaactctttaagggcaagttc
ttctactgtactgataagtcaaaagagttggagcgggattgcaggggccaatacctggac
tatgaaaaggacgaggtggaggcacagcccagactgtggaaaaaatatgaattccactat
gacaatgtcctctgggctttgctcacgctgttcaccgtttccacaggagagggatggccc
aatgtattaaagcactctgtggatgccacctacgaagatcagggtcccagtcctggtttc
cggatggaaatgtccattttttatgtggtatatttcgtggtctttcccttcttctttgtc
aatatctttgtggcgttgataattatcactttccaagaacaaggtgataaagttatgtct
gagtgcagcctggagaagaatgagagagcgtgcatagactttgccataagtgccaaaccg
ttgacacgttacatgcctcagaacaagcaatcttttcagtacaagatgtggaagttcgtg
gtgtcgcctccttttgagtattttatcatggtcatgatcgcactcaatactatcgttctg
atgatgaagttctatggatccagagattcatatgacttgatgctgaaaggtctgaacatt
ttgttcacatctatgttttccatggaatgtgtgttgaagatcattgcctttggtgtactg
aattatttcagagatgcctggaatgtgtttgattttgtcacagtattgggaagtattact
gatattttagtaacagaaatagcgaataacttcatcaacctcagcttcctgcgtctgttc
cgagcagcaagactcatcaagcttcttcgtcaaggttataccatccgtatccttctctgg
accttcgttcagtcattcaaggcattgccctacgtttgtcttctgattgctatgttgttc
ttcatctacgccatcattggcatgcaggtatttggaaacattgcactagatgatgaaact
gccatcaaccgtcacaacaactttcagactttcttgcaagcccttatgcttctattcagg
agtgccactggagaaggctggcacgagatcatgctggcgtgtctcagtaaccagccttgt
gacgaacgctccggcctgaccaaagatgaatgtggaaatgactttgcctacttttatttt
gtctcattcatcttcctctgttcctttttgatgttaaatctctttgttgctgtcatcatg
gataactttgaatacctaacacgagattcctccatcctgggcccccaccacctggatgaa
tatattcgggtttggggagaatatgacccagcagcttgtgggcgaatcggctacactgac
atgtatgagatgctgagacacatgtcccctccactaggcctggggaaaaaatgccctgca
cgagtggcgtataagcgtcttgtcaggatgaacatgcccatctcagaccaggacttaact
gtccatttcacttccaccctcatggccttgattagaactgccctggatatcaaactggcc
tcaggaggtgtaaaccagcatcagcgtgatgctgagctgaggaaagaaatttcttctgtc
tggccgaacctttcccagaagacactggatttgttggtgccacctcacaagcctgatgaa
ataacggtggggaaggtgtatgctgcacttatgatatttgatttctacaagcagaacaaa
aatagcagagatcagtcccatcaacaaccaggaaatctttctcagacaggggctctgtcg
ctgtttcatcctttgaaagcaactttagaacaggccctgccaggcccttttggcaatgcg
aaaatgtttcttcgtcagaagagctcagcctcactcaacaacggaggtgctttgccaaac
caggagagtggaatcagagagtctagctcttggggtgctcatcgggcaccggatgctctg
tatgagaccaaaacaccaacattcgagcggggtcattctgaggagattcacttggaacag
acatgcaaacagtctgtagaaatgaaagaaatgggtcctaatatttccggtggagatcac
cagcctgacctcgagagccagggtagggcggcatcgatgccacgtttggctgctgaaacc
cagcctatcccagactcaagccccatgaagcgttccatctccaccttgacaccacagcag
cagcgtcctcgcagcatgcatctgtatgaatactccctggagcgggtaccacctgaccga
actcaccaccatcatcaccatcgctgccatcgacggaaagagaagaaacaaaagtctttg
gagaggtcaccaccccaacaggatgatgcagacacagccacaaccaatgattttgccttg
gcacagccaggagaggtctcatccaaggaaaagaggcaggaacgaggcaggtcccaggag
aggaagcagtattcctcctcttcctcagaaaaacagcgtttctattcctgcgaccgctat
ggcagccgggaccattctcagccaaagtcatctgatcgcagtagacctacttcccccaat
ggaggccaggaacaaggacacaatagacagggtagtggttcagttaatgggagccccctg
ctgttgacatctggtgctagcaccccgtgtcggggtcggagacagctccctcagacgcct
ctaaccccccgccccagcataacctacaggactgcaaactcctctcctgtccacttctcc
gcttcacaaaccattctgcctgctttttcccctggacgtctgagtcgtggcctgtcggag
cataacacactgttgcgtggcgactctcagaaccatgcgcatgtcctggtggcccgcatt
ggttctgacccctctttggggcaccgcgatgattgtgacaattccttccgtgttctgcta
gaagacccactgacctacgaggaagcactggccacaaattcagggaggtcgtcccggact
tcttacgtctcatctatgacatcacagtctcaccaaatccgcagagttcccaatggctac
cactacaccttgggtctcagcacaggcgccgggacaagcatgagaggacggggccattac
cacgaagcccaggaggatgactggtgctag
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integrated database retrieval system
