Geotrypetes seraphini (Gaboon caecilian): 117367681
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Entry
117367681 CDS
T09159
Symbol
TTF1
Name
(RefSeq) transcription termination factor 1 isoform X1
KO
K15225
transcription termination factor 1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117367681 (TTF1)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
117367681 (TTF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
117367681
NCBI-ProteinID:
XP_033816370
UniProt:
A0A6P8SCK4
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Position
10:complement(55236776..55295797)
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AA seq
747 aa
AA seq
DB search
MEDDLNFKCTATHNSLKRKRKHKSQTNQKYDENEGLSFAKISEALPSEINEGHKVKRKKN
KRTKKNSKEFETKERGKKRKQSSDLLEEDSEPAARLYKEEGGTAHSFIVKKQKTITAEQD
EVEEWNTENVMEQYRKKKRKHSSDLQEEDSEPAARLYKEKGLGDHFITCDTAHSFIIKKQ
KTITAEQDEVEEWNTENVMEEHHKKKKKKRKHSSDLQEEDSEPAARLYKEEGLVNHFITC
DTAHFFIEKKQKTITAEQDEVEEWNTEHVIEEHRKKKKKKKKMKNRIRSSEDKVKEEIVE
PSCPNVEILNSENEGESLSCSLAKKLKKKRKLQLSLMSKSSGKIASVETAQEETQPVTSL
NLLDCHEAALKKMEEFIPHVRSLCHTTVLSLLKNDLPRFQVFKKLGIPIKHGRFTMEENQ
QIQKNVEIFLELTGIDCADKLFNPNRYPEESAAIKQAKLQNQFLLQIAEGIPRTCKLVLM
RAEKIFNIYNYKGRYTKEEERKLREYHATCGNNWKAIGELMCRSNHSIALKYSQLKTAAC
RGPWTKEETTRLLMAIEEVILNSDDPLLISEIEAESSQEFLSVLREKLYKGISWVEVEAK
VGTRNWMQCKSKWTDLLTTKMTQGQKVYSGYKGLQAKINMIKRLYEMQLEDSNEVNWEEL
ADCIGDVPPSYVQAKFYKLKACRVPNWNKKTFPEIIDFLYENTLPEFEERLSKTEKKFAK
ALCNQQKQTVFRICDIFQYEYCDSENE
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgatttaaactttaaatgtacagccactcataatagtttgaagagaaagaga
aaacacaagagtcaaacaaaccaaaaatatgatgagaatgaaggtctttcttttgccaag
atatcagaagctctgccttcagagattaatgagggtcataaagtgaagaggaagaaaaac
aaacgcacaaaaaaaaactctaaagagtttgaaaccaaagaaagaggaaagaaaagaaag
cagagctctgatctgctggaggaagacagtgagcctgctgcaagactgtataaggaagag
ggtggtactgctcattcttttatagtaaagaaacagaaaaccataacagcagagcaagat
gaggtggaagaatggaatacagaaaatgtcatggagcagtatcgtaagaagaaaagaaag
cacagctctgatctgcaggaggaagacagtgagcctgctgcaagactgtataaggaaaag
ggcttgggggaccattttattacctgtgatactgctcattcttttataataaagaaacag
aaaaccataacagcagagcaagatgaggtggaagaatggaatacagaaaatgtcatggag
gagcatcataagaagaagaagaagaaaagaaagcacagctctgatctgcaggaggaagac
agtgagcctgctgcaagactgtataaggaagagggcttggtgaaccattttattacctgt
gatactgctcatttttttatagaaaagaaacagaaaaccataacagcagagcaagatgag
gtggaagaatggaatacagaacatgtcattgaggagcatcgtaagaagaagaagaagaaa
aagaaaatgaagaatagaataagatcctctgaagacaaagtgaaagaggagattgtggaa
ccttcttgcccaaatgttgagatcctgaacagtgaaaatgagggggaatcattgtcttgc
agcttggcaaaaaagctcaaaaagaagaggaagttgcagttgtctttgatgtctaaaagc
agtggaaaaatagcttctgtagagacggcacaagaagaaacacagccagtgacttctctt
aaccttttagactgtcatgaagcagccctaaagaagatggaagagttcattcctcatgtg
aggagcttgtgtcatactacagtgttatctttgttgaagaatgacttgccaagatttcag
gtgttcaaaaagcttggaattcctataaaacacggtagattcaccatggaagaaaatcaa
cagatacagaaaaatgtggaaattttcttagagctaactggaatagattgtgcagacaaa
ctgtttaatcccaaccgataccctgaagaaagtgctgcaatcaaacaagcaaagttacag
aatcagtttttactccagattgcggaggggatacctcgaacctgtaagctggtgttgatg
cgggcagagaagatatttaatatctacaattacaaaggaaggtacaccaaggaggaagaa
agaaaattaagagagtatcatgctacatgtggcaacaactggaaggcgattggtgaactg
atgtgccgcagtaatcactccattgccttgaagtactcccagttgaagacagctgcatgt
cgtgggccctggactaaggaggaaacaacaaggctactcatggccatagaggaggttatc
ctaaatagcgatgaccctctattgatttctgaaatagaggccgagagttctcaggaattc
ctttctgttctgcgtgagaaactttacaagggcatatcctgggtagaggtggaagcgaaa
gtgggaacgaggaattggatgcagtgtaaatcaaagtggactgatcttctcactacaaag
atgacacaggggcagaaagtatattctggatacaaaggtctgcaagcaaaaatcaatatg
ataaaaagactgtatgaaatgcagttggaagacagtaatgaggtaaactgggaagagctg
gcagattgtataggagatgtccctccatcttatgttcaagccaagttttataagctgaag
gcatgtcgtgtccctaattggaataaaaaaacatttccagaaattatagattttctgtat
gagaacacccttccagaatttgaggagcgtctaagtaagactgagaagaagtttgccaag
gcactctgcaaccagcagaagcagacagtttttcgaatctgtgacatcttccaatatgaa
tactgtgattctgaaaatgagtga
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