Geotrypetes seraphini (Gaboon caecilian): 117367751
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Entry
117367751 CDS
T09159
Symbol
CNOT3
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117367751 (CNOT3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117367751 (CNOT3)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117367751 (CNOT3)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
117367751 (CNOT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Cluap1
Motif
Other DBs
NCBI-GeneID:
117367751
NCBI-ProteinID:
XP_033816537
UniProt:
A0A6P8SE81
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Position
10:complement(145543137..145653255)
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AA seq
784 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIENRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEDVGQWLTNTIDTLNMGVDQFESEVESLSVQTRKKKGDKDQKQDRIEGLKRHIEKHRYH
IRMLETILRMLDNDSINVDAIRKIKDDVEYYVDSSQDPDFEENEFLYDDLDLEDIPQALV
ATSPPSHSHMEDDIFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKIRGRSTDSEVSQ
SPAKNGSKNAHNSHHSQSPAVNSGFQMASSSSTSLSSLGSGPGTNSNGTAANNSTAITSS
KSNPAPGTPTPYAQAVAPPPSSSSTSQPRPPSTQQNASKQNGATSRVWSNEHFTGLCKQC
TGWCGAGAPSAAAAGIQSSPPLVSRESAGSSGEAQSSLTTHGGFSSAADSEGYSSVVADS
TSDSALNNSALSQMNQPVPHSLPSSNVKESSSISQSTISITSSGTSLLLPLTVNPPSSPT
PSFSDLKPSQPLLNGPPQYTSTPEIKTPEPLSTLKSMAERVAVGSGLEGSVPTLHITERE
IVITSTTSQPVSSQPPTQLSEVNIPLSLGVCPLGPVPLTKEQLYQQAMEEAAWHHMPHPS
DSERIRQYLPRNPCPTPPYHHQMPPPHSDTVEFYQRLSTETLFFIFYYLEGTKAQYLAAK
ALKKQSWRFHTKYMMWFQRHEEPKTITDEFEQGTYIYFDYEKWGQRKKEGFTFEYRYLED
RDLQ
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaaagaaaactgcaaggtgagattgatcgctgtttgaaaaaggtatcggag
ggggtggagcagttcgaggatatttggcagaagcttcacaacgcagcgaatgccaaccag
aaggaaaagtatgaagctgacttgaagaaagaaataaagaagctgcagcgactgagggac
caaattaagacgtgggtggcctccaacgagatcaaagacaaaaggcaactgattgagaac
cgaaagctgattgagacgcaaatggagaggttcaaggtggtggagcgagaaaccaagact
aaggcatactccaaggaaggactgggtctggcccagaaagtggacccagctcagaaagaa
aaggaagatgtcggtcagtggctgacgaacacaatcgatacgttgaacatgggggtggat
cagtttgaaagcgaggtggagtcactgtctgtgcagacacggaagaagaaaggcgacaag
gatcagaagcaggaccgcatcgaaggcctgaagcggcacattgagaagcaccggtaccac
atccgcatgctggagaccatcctgcgtatgctggacaatgattccatcaatgtggacgcc
atccgcaagatcaaggacgacgtggagtattatgtggactcctcgcaggacccagacttt
gaggagaacgagttcctctatgacgacctcgacttagaagacattccacaggcgctggta
gccacctctccacctagccacagccacatggaggatgatatcttcaatcagtccagcagc
actcccacctccaccacttccagttcccccatcccacctagccctgccaactgtaccacg
gagaactcagaagatgacaagaaaatccgaggacgctcaacagatagtgaagttagtcag
tcaccagcaaagaatggttctaaaaacgcccacaacagccaccactcgcagtcgccggca
gtgaactctggcttccagatggccagcagctccagcacctcattgtcatcattgggcagt
gggcctggtaccaacagcaacggcacagcagccaacaacagcactgccatcaccagcagc
aaaagcaatccagcaccgggtacccccaccccctatgcacaggcagtggcccccccacct
tccagctcgagcacctctcagccccgaccccccagcacccagcagaatgccagcaagcag
aacggtgccacaagtcgcgtatggagcaatgagcacttcaccggcctgtgcaagcagtgt
acaggctggtgcggtgcaggggctccatcggcagcggctgcaggcatccagagctcccca
ccgctggtgtctcgcgagtcagcagggagcagtggggaagcccagtcttccctcaccact
cacggaggattttcctcagcagctgacagtgagggttacagctctgtagttgcagacagc
acatcggactcagctctcaataacagtgctttatcccagatgaaccagcctgtccctcac
agccttccttccagcaatgtgaaagaaagcagtagcatctcccagtccaccatcagcatt
actagcagtgggactagtttactcctgccattgacagtcaaccctcccagctccccaacg
cctagctttagcgacttgaaacccagccagccattgcttaacgggcctcctcagtacact
tccacgcctgagatcaagacacctgagccattgagcacactaaaatcgatggccgagagg
gtggctgtgggctctggcctggaaggttcggtaccaaccctgcatatcactgaacgtgaa
attgtaatcactagtacaacttcacaaccagtttctagtcagcctccaacgcagctttcg
gaggtgaacatccccctctcgctgggtgtatgtcccttgggacctgtccccctcacgaag
gagcagctgtatcagcaagctatggaggaggcagcgtggcatcatatgccacacccttcc
gactcagagagaatacgacagtacctccctcggaacccctgtccgacaccgccttaccat
catcagatgcctccacctcactcagatacagtggagttctaccagcgactctccacagag
acactctttttcatcttctactatctggagggcacaaaagcacagtatttggcagctaag
gcactgaagaagcagtcctggaggtttcacaccaaatacatgatgtggttccagcgacat
gaagagcccaagaccataacagatgagtttgagcagggcacctacatttattttgactat
gagaaatggggccagaggaaaaaggagggattcacctttgagtatcgctacctggaggac
cgtgatttgcagtga
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