Geotrypetes seraphini (Gaboon caecilian): 117367843
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Entry
117367843 CDS
T09159
Symbol
NUP214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117367843 (NUP214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117367843 (NUP214)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117367843 (NUP214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Nup214_FG
Beta-prop_EML_2
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
WD40_CDC20-Fz
Beta-prop_WDR19_1st
WD40
Beta-prop_HPS5
N36
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
117367843
NCBI-ProteinID:
XP_033816749
UniProt:
A0A6P8SEI6
LinkDB
All DBs
Position
10:53341391..53506099
Genome browser
AA seq
2046 aa
AA seq
DB search
MEEDSDLPPEREMKDFQFRQLKKIRIFDSPEELPKERSNLLAVSNKYALVFAGGTQGLKI
FHTKDILIPNQAGEDPNKIADSVSSMVVPMKFPVHHLALSSDNLTLSVCMTSSEYGSFVS
FFDVRTFLNEAKQLKRPFAYHKLAKEASCMVMDLKWNPAISNLVAICLSDGNISVLQVTD
TVKVHATLSSPVAVTSVCWSPKGKQLAVGKQNGTVVQYLPTLQEKKVIPCPPFYGSDNLV
KVLDVLWVGTYVFAVVYAAADGSLEQSPQLVVIVLPKKEDKQGEKFLNFTEPCFSSSSER
QHHYFLSYIEDWDLILGASAASIEVSIIARQEDQTNWELWLLEDSSRAELPVTENSDDTM
PVGMAIDCTSQLEIYISDEKKLPPAPVLLLLSTDGVLCPFYMINLIPNAKSLLITPEQLA
IEGERQAKAIVSAGSTSASATSLPAHTVSSPFTVMASSTPKPVEPTTFSFTADISKPVPV
SSVTAAAPLTFAPTSSKPASIPVPATPATSSSFSFGSPGFKSSLDNLTVPVALPVSSAAL
KTNFVASPSMVKANLHEKFTALETPGPIVTGSPISASFSFTPAPKPTSIGTPLSQSTPFP
ASSWTSGKTPAPTIASTASRPVQIASLASTQQKYKVTPAAARTSPAQNLPVLSTVLDKQE
QWKDSDPVLVGIGEEIAHFQKEMEELKSRSAKACFQVGTVEEMKQLRTESKDLHNFLLEI
KKTTESLHGDISILKTTLLEGFAGVEEAREQNERTQDSGYLALLYKKPLDPKSEAKMQEI
RRLHQYVKFAVQDVNDVLDLEWDRHLERKKKEKRLLVPERETLFNALANNREIINQQRQR
LNQLVENLQQLRLYNQTSQWSSTSDTTSQGSSLSFDSELESLRNALTKNTLESLTKPQPK
QPAKLSPVKQAQLRSFLSKRKTPAVRSLAPASLSRSVFLSPKYCEDLDDDSSTSSVSQAL
DNEDVQSEEEEVKVEVAPARIPRHAPVVRTPSIQPGLVTQSPPFGKPQLGPAGNLMCASV
SRAVPPGADSTMLVTKTVKHGAPPATVPIPATQAAAAAALRRQIASQTSAMASPLSESTL
KSVPQVVNIQELKSAGTSPAVPAVIGSSVPLPAAQAVQQVLATVASNQSKQKHLVEDLLV
SAGNSMKTHSGSMPAGISVAPTSKTTGQGTAKTDSTVANSVVTPVTSASLQLGKAFTFSS
AGSGFNFGSVTLSAGAQSGLSTTTDASSTPAKESNQPGSFSFGGTSKTLFGSVSEGSFIF
GSVKPVVTVGTTAVSGSYGDTPSNGKPITSTAPPSVAVSKPESQVAKPGESFFSNSLTGE
TLGSFSGLRVGQAEENIKDNTPKAPTSTISDSQLAKTSVTAPGFSFGVTVQSGKPTEDIA
VSAIQSVGTSIPNTSGSSSGSPQFTITGPSSNLFNQGDPTLGSSKPPSFGIPQPSNGTIY
ASATDTVVAPSAPLSFGSLLGSAPATVTSAANDLKCTAESDKRTENGSAASAPVPVSIPL
TSQPADSPEAPIASPQATTADPKTDVSGSAVAQLPESKLEAVPSAPVLVTSEQGTTSVTT
PPSVIAPLPTVTTCTPATSMHSSASGTAPFQTSTAATPSLYSQPPSSAFGQPASGASTTP
SSAPIFGQVTASTASSPFGQQQIGVTSTTSSGFGAPAFGTAGAGFSQPVFGQAPAFGQPA
SSSSASFSFAQPGFGAIPAFGQPASSTPVSSSSNLFGGTTSSSSTSSFSFGQSPASGSGG
AGGGLFGQNSTPAFGQSSSFTPGGSLFGNTAASTTTTSSSGFTFGLPSGFGSSSSGSLFG
QSSNPGTGGFGQQPSSAGGLFGASSVGRGCGFFSGLGGKPSQEAANKNPFGSTGAGFGSS
TASNPTSLFGNSGAKSFGFGSSTFGDQKPTGTFSAGGGSVASQGFGFSSPTKTGGFGAAP
VFGSPPTFGGSPGFGGVPAFGSAPAFSNPLGSTGGKVFGEGTDAASTGGFGFSGSGNTNS
FGNLANQTTPSFGSLSQQSPGGFGTQNASFSSFGSSGGGSGSSGGGGGFGFGSPNQPASG
FSGWRS
NT seq
6141 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagactcagacctgcctccggagagggagatgaaggattttcagttcagacag
ttaaaaaagatacgaatctttgactctcctgaagaactgcccaaggaacgttcaaatctc
ctggctgtgtctaataaatatgcccttgtctttgctggaggaactcagggcttgaagatt
tttcacactaaagatatcctgattccaaatcaagctggcgaagatcccaataaaattgct
gactctgtttccagcatggtggttcccatgaagtttccagtacatcatctggctctcagt
tcggataacctgaccctatctgtctgcatgacatcctcagaatatgggtctttcgtctcc
ttttttgatgttcggacatttttgaatgaggccaagcaactgaaacgtccctttgcatat
cataaactggccaaggaggcaagttgcatggtgatggacctgaagtggaatccagccatt
tccaacctggtggctatctgtctgtctgatggcaacatctctgtcttacaagttactgat
actgtcaaagtacatgccacactttcttcccctgtggctgtgacatcagtttgctggagt
cccaaaggaaagcaactggctgttgggaaacagaatggcactgttgtccagtacctgcct
acccttcaggagaagaaagtgattccatgtcctcctttctatgggtcagacaatcttgtt
aaagtcttggatgtgctgtgggttggaacctatgtgtttgctgtggtttatgcagctgct
gatgggtccttggaacaatctcctcagcttgtggtcattgtactgcctaaaaaggaagat
aagcaaggagagaagttcctgaacttcactgagccctgcttcagcagcagcagtgagagg
cagcatcactatttcctgagctacattgaggactgggatttaatcctaggtgcttctgca
gcgtccatagaagtcagtatcattgctcgccaggaggatcagacaaactgggaactgtgg
ctgctggaggactcgagtcgtgcagagctgccagtcacagaaaacagtgatgatacaatg
ccagtgggaatggccattgactgtaccagccaactggaaatctacatcagtgatgagaag
aagcttcccccagctcctgttcttttattgctctctacggatggtgttttgtgtccattt
tatatgattaatctcatcccgaatgctaaatcgctgctcatcacaccagaacaactggcc
attgaaggggagagacaagcaaaagcaattgtgagtgctggctcgacatcggcatctgcc
acatctcttcctgcacatacagtatcttctccattcaccgtcatggcatcttctacccca
aagccagtagagcccacaactttctcctttacagcggatattagcaagccagtgccagtt
tctagtgttactgcagctgctcctcttacatttgctcccacctcttccaaacccgcttcc
attccagtgcctgccaccccagctacttcctcttctttctcctttggatctcctggtttc
aagtcctcactggacaacttgacagttcctgtagcactgcctgtgtcatcagctgcatta
aagaccaacttcgttgcttctccttccatggtcaaagccaacctccatgaaaagttcact
gcgcttgagactccaggccctattgtcactggaagccctatttctgcttcattttctttc
accccagctcctaaacctacatctattggcacaccattgagccagtccacaccttttcca
gcttcatcttggacttcaggcaagacccctgccccaacaatagcttcaacagcatcacga
cctgtacagatcgcctcattggcttcaacccagcagaaatataaggtcactccagcagca
gctagaacaagtcctgcacagaacctgccagtgttgagcacagtgttagataagcaagag
cagtggaaggattcagaccctgtgctggttgggataggagaagagattgcacatttccag
aaggagatggaggagctgaagagtcgaagcgccaaagcctgtttccaggtgggcactgtt
gaagagatgaagcagcttcgtacagaatccaaggacctccacaactttttgctagagatc
aaaaagacaacagagtcccttcatggagacattagtattctgaaaacgactttgctggag
ggctttgcaggtgttgaagaagcgagggagcagaatgagcgaacgcaagactctggatat
ctggccttgctttacaaaaaacctctggaccccaaaagtgaggccaaaatgcaggagatc
cggcgtctgcaccagtatgtgaagtttgctgtgcaggatgtgaatgatgtcttagatctg
gagtgggacaggcatctagaaaggaagaagaaagagaagcggttgctggttcctgaacgt
gaaacactgtttaatgcacttgcaaacaatagggaaataatcaaccagcagcgacaaagg
ctgaaccagttggtggaaaacctccagcagttgcgtctctacaaccagacatctcaatgg
agcagcaccagcgacaccacctctcagggcagcagcctgagctttgacagtgaacttgaa
agtcttcgcaatgctttgaccaaaaacaccttggagtctctaactaaaccccaaccaaaa
cagccagccaaactgtccccagtgaaacaggctcagctgagaagttttctaagcaagaga
aagactcctgcggtgcgctccctggcaccagccagtctatcccgctcagtgttcctatct
cctaagtattgtgaggatttggatgatgatagctccacatcatccgtctcccaggctcta
gataatgaagatgttcagagcgaggaagaggaggtgaaggtagaggttgcaccagcccga
atccctcgacatgccccagtggttcgcacgccctccattcagcctggtctggtcactcag
tctccaccctttgggaaaccccagctgggccctgctggtaacctgatgtgtgcatctgtg
agcagagctgttccaccaggagcagatagcacaatgctggtgaccaaaaccgtgaagcat
ggagcacctcctgctacagttcctatccctgcaacacaggcagctgcggctgctgcactc
cggcgccaaatagccagtcagacttcagccatggcttccccgctgagtgagtcaactctg
aagtctgtgcctcaggtagtcaatattcaggagctgaagagtgctggaaccagcccagct
gtgcctgcagtgatagggtcatctgtccctctgccggctgcccaagctgtccagcaggtc
ttggcaacagtggcttcaaaccagtccaaacagaaacatttggtggaagacttattggtt
tctgctggcaactccatgaagacacattctggttccatgcctgcaggtatcagtgttgct
cccaccagcaaaactacagggcaagggacagcaaagacagactcaacagtagccaactct
gtggtgacaccagtgacctctgcttcattacagttgggcaaggccttcaccttctcttca
gcaggatctgggtttaattttggttcagtcacattgtctgcaggagcacagtctggactt
agtactactacagatgcctcttcaacccctgctaaagagtccaaccagcctggttctttt
tcatttggtggaacctccaagaccttgtttggatcagtctctgaaggatccttcatcttt
gggtcagttaaaccagtagtcaccgttggaaccactgcagtgagtggatcatatggagat
accccatcaaatggcaaacctattacttccacagcaccaccttctgttgctgttagcaaa
ccagaaagccaagtggcaaaaccaggagaaagtttcttctctaattccctgactggggaa
acacttggcagtttttcaggtctaagagtaggtcaagcagaggagaatattaaagacaat
actcccaaagctccaacctccaccatttctgacagccaactggcaaaaacctcagtcaca
gcacctgggttcagctttggagtaactgtacagtcaggaaagcccacagaagatattgca
gtttcagccattcagtcagtgggcaccagtattcccaatacctctggttcctcaagtggc
agtccacagttcacaatcacaggaccttcctccaatttgtttaaccagggagaccccact
ctaggtagttcaaagcccccatcttttgggataccacagccaagcaatggcactatttat
gcttctgccacagatactgtagttgcgccatcagcaccactttcctttggaagtctcctg
ggttcagcccctgccactgtcacatctgcagcaaatgatctgaaatgcactgcagagtct
gacaaacggactgagaatggaagtgctgcatctgcaccagtgcctgtatctatacctttg
acttctcagccagcagactctccagaagcaccaatagcctcccctcaagccaccactgca
gatccaaagactgatgtatctggttctgccgttgctcagttgcctgagtccaagttggag
gcagtcccttcagcgcctgttctggttacatctgagcagggcaccacctcagtgactacc
cctccatctgtgattgcacctcttcccacagtcacaacctgtacccctgcaacatcaatg
cacagctcagcatctggaacagctcctttccagacttctactgcagctactccttccctt
tactcccagcctcccagctcagcctttggccagcctgccagtggcgcatccaccacgcct
tcctcagcacctatttttggacaagtaactgccagtaccgcttcatctccctttggtcag
cagcagattggggtcacaagcacaactagctctgggtttggggctccagcctttggcacg
gcaggagctggatttagtcagcctgtctttggccaagcaccagcattcggccagccagcg
agcagctcctctgctagcttcagctttgcacagcctggatttggggctatacctgcattt
ggtcagcctgcctcttccaccccagtatccagcagctcaaatctctttggtggtacaacc
tcctccagcagcaccagctccttttcctttggacagtctcctgccagtggcagtggcggc
gcaggaggagggttatttgggcagaacagcacaccagcatttgggcagagctccagcttc
acaccaggtggctccttgtttggaaatacagctgcttcaacaaccaccacatcctcttct
ggattcacttttggtctgccttcaggtttcggttccagttcctctggttctctctttggt
cagtcatctaatcctgggacaggggggtttgggcaacagccgtcctcagctgggggtttg
tttggagctagcagtgttggaagaggctgtggattcttcagtggacttggtggtaaacca
agccaagaggccgccaacaaaaatccttttggctcaactggtgctggatttggatcctca
actgcttcaaatcccaccagcctctttggaaacagcggagctaagagttttggatttggc
agctcaacctttggagatcagaagcccacagggacttttagtgctggtggagggagtgtg
gcaagccagggctttgggttctctagcccaaccaaaacaggtggcttcggtgctgctccg
gtgtttggcagccctcctacatttgggggatccccaggatttggaggggtgccagcattc
ggttcagccccagccttttcaaaccctctgggctcgacgggaggcaaagtgttcggcgag
ggtacagatgcagcaagcaccggaggatttggtttcagtggcagcggtaacaccaacagt
tttggcaatctagcaaaccagaccacaccaagctttggttcactatctcagcagtctcca
ggcggctttggaacccagaatgccagcttttccagttttggttcgagtggaggtggtagt
ggcagcagcggtggaggaggagggtttggttttggatcacctaaccaacctgcctcgggc
ttcagcggatggaggagctga
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