Geotrypetes seraphini (Gaboon caecilian): 117368006
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Entry
117368006 CDS
T09159
Symbol
TSEN34
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsh03016
]
117368006 (TSEN34)
Enzymes [BR:
gsh01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
117368006 (TSEN34)
Transfer RNA biogenesis [BR:
gsh03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
117368006 (TSEN34)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
Motif
Other DBs
NCBI-GeneID:
117368006
NCBI-ProteinID:
XP_033817096
UniProt:
A0A6P8SQC8
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All DBs
Position
10:complement(141391362..141397044)
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AA seq
304 aa
AA seq
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MENALIPIHLLQGTALVWNMEDVRKIRQCHRLVGSLVGSLPRKPRQNARLGLPLQLLPEE
ARLLAEIRAAVLLRTVEHEKAAGGQDEGCDSEGSSSQGVEEVLLSEVAVYKQALNESYEE
QWQLALQEKRSLLESLSEQIAQGRARRRHERGEQTGDPNQPANREDVKENFHFPQEAMMV
QLPTARPAHSLTEVVDWQHPSPDWPHAGQLVHEIRYQVFRDLWEKGFFLTSGGKFGGDFL
VYPGDPMRFHAHYIALCTVPDETLQLCDIVAAGRLGSNVKKTVLLCSAKQDGTVTYMSLQ
WAGL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggagaacgccttaattcccattcatttgctgcaaggcactgccctggtgtggaacatg
gaggatgtccgcaagatccggcagtgccataggctggtggggagtctggtagggtcctta
ccccgcaagccaaggcaaaatgcaaggctgggcctccctctacagctactacctgaggag
gcccggctgctggcagagatcagagctgctgtgctgctgaggacagtggaacatgaaaag
gctgcaggaggacaggatgaaggttgtgattcagagggcagcagcagccagggagtagag
gaggtcctgctgtcagaagtggcggtatacaagcaggcactgaatgaaagctatgaggag
caatggcagcttgcattacaggagaagcgcagtttgctggagagcctttcggagcagatt
gcgcagggccgagccagacggaggcatgaacgtggcgagcaaacaggggacccaaaccag
cctgcaaacagagaggacgtgaaggagaattttcatttcccacaggaggccatgatggtg
cagctgcccacagcccggccagcccacagcctcaccgaagtagtggattggcagcaccca
tccccagactggccgcatgcagggcagctggtccatgagatccgttaccaggtgttcaga
gacctttgggaaaagggattcttcctgaccagtggtggcaaatttggaggggacttcctg
gtgtatcctggtgaccccatgcgcttccatgcccattacatcgctctctgcactgttccg
gatgaaaccctccagctctgtgacattgtggcagcagggcgactaggtagcaacgtgaag
aaaacagttctgctgtgctcggcgaagcaggatggaacggtcacctacatgtctctccag
tgggctggcctatag
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