Geotrypetes seraphini (Gaboon caecilian): 117368036
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Entry
117368036 CDS
T09159
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
SAM_1
Ank_5
SAM_2
SH3_2
Ank_3
SH3_9
SH3_1
PDZ_6
PDZ
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
117368036
NCBI-ProteinID:
XP_033817170
UniProt:
A0A6P8SEH9
LinkDB
All DBs
Position
10:complement(120995866..121090803)
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AA seq
1875 aa
AA seq
DB search
MPQSPVSSDEEQTSIPEYPGAESDSDSSGEEMARGGKSNPTSANSKASGNHPSSMAAARR
IKERSLSVPDDVHFSMMVFRIGIPDLHQTKCLRFNPDATIWVAKQQILCTLNESLKDVLN
YGLFQPATNGRDAKFLDEEQYLRQYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHT
KASLKKFLEYVQHSATDKVSRLLDKGLDPNYQDSESGDTPLTLAAQLESSIDVIRTLCLG
GAHIDFRARDGMTALHKAVCSRHYSALMALLDLGGSPNYKDRRGLTPLYHTAIVGGDPRC
CELLLYNRAHLGTTDENGWQEIHQACQHGHTQHLEHLLFYGADPAAQNASGNTALHICAL
YNKESNARILLYRGANREVKNHSGQTAFQVAVISGNFELGELIKSHRETDVVPFQESPCY
AAQSRNGGKPLGLPNVLLRANSDNSLALPDWMVYSSPTTNTVTLQGHKISTGSARSSSSP
RGARSRSPSRGRHAEDVKKQPRGRPSSGGYTKDTVGGGTLSNRGRRKLYSAVPGRAFMVV
KPYQAQTDGELSLSKGEKLTVISVGEGGFWEGNVKGRVGWFPSDHVEEIPVKTQDGKQEN
RSDKAKRLFRHYTVGSYDSFDAPSDYIIKEKTALLQKKDSEGFGFVLRGAKAQTPIEEFT
PTPAFPALQYLESVDEGGVAWRAGLRMGDFLIEVNSHNVVKVGHRQVVNMIRQGGNNLMV
KVVMVTRNPEMEDTMRKKVPQQTKRVTPPAISVRSKSMTSELEEMDYEPAQTSEKKRTVY
QLALNKLDEILAAAQQTIGVNEGSGAGSVASVAKSRSATKNFYPPEPSFDKHRLGAASQS
PKSVYERPSYLSSSPSQTLMLRQRSIGSVDDEKPFLATPSVKFSRSLSVPGSEDIPPPPT
TSPPEPPLNSSLNSARVNPSVRSAFNASSEAKVYNTASRQESDLYEHQARRQPRQREKAP
FYRRDSEPGADGRAHMNAVSQPNARGWRGQPQELRYVNLPGRSASTAMYVPAKAMRRKGQ
LIKQIKVEDKQQAKSQEKNSIPIPTIIIKAPSTSSSGRSSQGSSMEAENQSDPIPSLELH
EGIDFTSQFGAALVGAARRDREWYSEARRKSALFLSTDMADETDAVSVPLPRLQHSKSID
EGMFASEPYMHLNVPSNFGLPSNIELSGGYSNQPKTGKVSGSSTTSAFSTVGSTFLPHLQ
ARPAGIVTGNLIHPLTGKILAPSSPLGLALAARERALKESQQQSRNDVEERKSRPSSPCF
SESCRSPSEFSGSSARKLWGAGLDQGKEMDTKSCIEKKSEETHRHEPSNLMLLRGVDQGR
TWEKKGEESEKAELHVRFIEETEERGDERNSTGKHDRKEGRLSSAVAHPSFSNTNSDPNQ
PGKEANGLPLLVLPPPAPSIDADDDFLFTEPLPPPLEFSNSFDKPESPPSAATGGNTLPA
PVPPSFDTGITPTLDSTTSSLTSYDSEVATLTQVAPEPKEPHVNFSSVVSAIQIPACDPV
ETVTDSGIEEIDSRSSSDHHLETISSVSTLSSMSGLSTEGTELLDTYITYLDGQAFGTDK
APFQTKIRSRTFPSRAPGLLRDPTTATNCTISIAPCTDNVYTLTPSQGSSLCTPPEPSKE
AQRKSPTLSWEECPQGKMSPVSNMKSSIMNELSSKLQQMSGMSWSRPAESAVSFSVDRPS
SLQRHRMADDSSVSLISSKPVSSLYHNWPKSPQQIPKHPKSVDFDIRPALRRAPSPSTLS
TEQKISPTPRPSSLPILPSAPVYTGVFDLRGSPTAAGDPFPMFPSGSRSLSPTHFLPPPT
EKAFTSKPLPFWTKFDVADWLEYLNLGEHRQHFLENEIDGSHLPSLTKEDYIDLGVTRVG
HRMNIERALKFFLER
NT seq
5628 nt
NT seq
+upstream
nt +downstream
nt
atgccccagagtcctgtgtcaagcgacgaggagcagacaagcatccccgaataccccggg
gccgagtcagactcggacagctccggggaggagatggcccgcggtgggaagagcaacccc
acatctgccaacagtaaagcaagtggaaatcatccgtcttccatggcagcagcacgaagg
atcaaggagaggtccctgtctgtaccggatgatgtccatttcagcatgatggtcttccgt
attgggattcctgacttgcatcagacaaaatgcctgcgatttaaccctgatgccaccatc
tgggtagcgaagcagcagatcctttgtaccctgaacgaaagcctgaaagatgtcctgaat
tatggtctattccagccggccaccaatgggcgtgatgccaagttcttggatgaggaacaa
tatctccgccagtaccctcagtccttcgagaaaggtgtcccgtatctggagtttcgttac
aagacccgggtttacaagcagacgaatctggatgagaagcaactggcgaaactgcacaca
aaggctagtctgaaaaagttccttgaatatgttcaacatagtgccacggacaaagtgtcc
agactgctggacaagggactggaccccaattatcaggactcagagagtggagacactcca
ctgacgctggcagcccagctggaatcttccattgacgtcatccggacactgtgcctggga
ggcgcccacatcgacttcagagcacgggatggcatgacagccctgcacaaggcggtgtgc
agccgacactacagtgctctcatggcacttctggacctcggtggatccccaaattacaaa
gaccgtcggggtctgacccctctttatcacactgccatagtggggggcgacccccgttgc
tgtgaactactactttataacagagcccacctgggcaccacggatgagaatggatggcag
gaaatccaccaggcctgtcagcacggacacacgcagcaccttgaacacctgctcttctat
ggcgcggatccagcagcgcagaatgcctctgggaacacagctctccacatctgtgcactt
tacaacaaggaaagcaacgcccgaatccttctgtatcgtggggctaatcgagaagtgaag
aatcacagcgggcagactgcgttccaggttgctgttatctctgggaactttgagctggga
gaactgataaagagtcacagagaaaccgatgttgttccttttcaggagtctccgtgctat
gcagcccagtcccgaaatggtgggaaacccctaggtctccccaatgtccttctgcgtgcc
aacagtgataacagcttggctctgcctgactggatggtctactcttcacctaccactaac
acagtcaccctccagggacacaagattagtacggggagcgctcgtagctccagcagcccc
cggggggcccgaagtcgctctccgtccagaggacgccatgccgaggatgtcaagaaacag
ccgcggggacgtcccagctctggtggatatacgaaggacacagtgggcggggggacgctc
agtaaccgtgggagacgcaagctctactcagcagttcctgggcgcgcatttatggttgtg
aagccgtaccaggcgcagaccgacggagaactctctctcagcaaaggggagaagttgaca
gttatcagcgttggggaaggaggattctgggaaggcaatgtgaaaggtcgtgtaggctgg
ttcccttctgatcacgtggaggaaattcctgtaaaaacacaggatgggaaacaagagaat
cgaagtgacaaagccaagcgtttgttcaggcactatactgtgggctcttatgatagcttc
gatgctccaagcgactacattattaaagagaagactgcactgttacagaagaaggacagc
gagggattcgggtttgtgctgagaggagcgaaggctcagacccccattgaggagtttacc
ccaaccccagctttcccagctctgcaatacttagagtcggtggacgaggggggtgtcgcc
tggagagcggggctcaggatgggtgactttttgattgaggtgaatagtcacaacgtagtg
aaagttggacatcgacaggtggtaaatatgattcgtcaaggtgggaataatctaatggtc
aaagttgtcatggttacgagaaaccctgaaatggaagacaccatgcggaagaaagtgcca
cagcagacgaaacgtgtgacaccccccgctatttcagtacggtcaaaatctatgacatct
gaacttgaagagatggattatgagccggctcaaaccagtgagaagaagaggacggtctac
caactggcactcaataaactggatgaaattcttgcagccgctcagcaaaccatcggagtg
aacgagggaagtggtgccgggagtgtggcgtctgtggctaaatctcgaagcgctacaaag
aacttctacccccctgagccaagttttgacaagcatcggctaggggcagcatctcagagt
ccaaagtcagtctatgagaggccctcatacctgtcctccagtccttctcaaacgctgatg
ctgcgtcagagatcaattggctcagtagacgatgagaagcccttcctagcgactccttct
gtgaagtttagtcgcagtctctctgtgccgggctctgaagacatcccacctcctccaaca
acatctcccccagagccacccttgaattcaagccttaactctgcccgtgtgaacccaagt
gtgcggtctgcttttaacgccagctctgaagctaaggtatataacactgcctctcgccaa
gagagtgacttgtatgaacatcaagcaagaaggcagcccaggcagcgggaaaaggcacca
ttttaccgccgggattcggagcctggagcagatggtcgtgcacacatgaatgcagtttct
cagcccaatgcaagaggctggaggggacagccccaggagctccgttacgtcaaccttcct
ggaaggtcagccagcacggccatgtatgtgcccgccaaagcaatgcgtcggaaagggcaa
ctgattaagcagatcaaggtggaggacaagcagcaggcaaagtcacaggagaagaactct
atccccatccccaccatcattatcaaagccccatccacaagcagcagcggccggagtagc
caagggagcagcatggaggccgagaaccagtcagaccccatcccctccttggaattgcac
gagggcatagatttcaccagccagtttggtgcggcccttgttggcgctgctcgtcgagac
cgagagtggtacagtgaagcccgtaggaaatcagccctctttttgtccactgacatggcc
gatgagacggatgctgtatctgtaccactgccaaggctccaacactcaaaatccattgat
gagggcatgtttgctagtgaaccgtatatgcaccttaatgtcccatccaactttgggtta
cctagcaatattgagcttagcggtgggtattctaaccagcccaaaactggcaaggtgtct
ggctccagtaccactagtgcctttagcacggtaggttccacatttttaccacatctccag
gcacgtcctgcagggattgtgaccggtaacttgatacatcctttgactggaaagatcttg
gcccctagttcacccctgggtcttgcactagcagccagagagagggcactgaaggagtcc
cagcagcaaagccggaatgacgtggaagagaggaagtctcggccctcatcaccatgtttc
agtgaatcatgcagatctccctcagagttctctggaagctctgctcggaagctctgggga
gcagggctagaccagggcaaagagatggacaccaagtcttgtatagagaaaaagtcagaa
gagacccataggcatgagccatcaaatttaatgctgctgcgtggtgtggatcaaggacga
acctgggagaaaaagggggaggagagcgagaaggcagaattgcatgtgcgcttcatagag
gagacggaggagaggggagatgagaggaactcaactgggaagcatgacaggaaggaaggt
agactttcttctgcagtcgcccatccttccttctctaacacaaattctgaccccaaccag
cctggcaaagaggccaatggccttcctctcctagttcttcctcccccagcaccttctatt
gatgccgatgatgattttctcttcacggagcctcttccccctcccttagagttctcaaat
agctttgataaaccagaatctccaccgagtgcagcaacaggaggaaacacactgcctgct
cctgtacctccatcattcgacaccggcattactcccaccttagattctacaacttcaagc
ctgacatcctatgacagtgaagtggccactctgacccaggttgcccctgaaccaaaagaa
cctcatgtcaacttttcatctgtggtgtcggccatccagattcccgcctgtgatcctgtg
gagacagtgacagactctgggattgaggagattgacagccgaagcagtagtgaccaccac
cttgagacgattagcagcgtctctactctgtctagcatgtctggcctttcaactgaaggg
acagaattgctggacacctatatcacctatctggatgggcaagcttttgggacagataag
gcaccatttcagaccaagattcgatccagaacattcccaagcagggccccaggactactc
agggatcctactactgccaccaactgcaccatttctatagcaccctgcacagacaatgtc
tacactcttaccccatctcaggggtcttcactgtgtactcctccagagccttcaaaagag
gcccaacggaagtccccaacactgtcctgggaggaatgtccccaaggaaagatgtctcca
gtatctaacatgaagtctagcatcatgaatgagctcagctccaagcttcagcagatgagt
ggcatgtcatggtccagaccagcagagtcagcagtctccttcagtgtggacagacctagc
tccttgcagagacacaggatggcagacgattcttcagtctccttgatttcatcaaaacct
gtaagcagtttgtaccacaactggcccaaatctccacagcagatcccaaaacatcctaag
agcgtggactttgacatccgtcctgcactgaggcgagcgcccagtccttcaaccctctcc
acagagcagaagataagccctacgcctcgcccttcctccctccccattttaccttctgcc
ccagtgtatactggggtgtttgatctacgtgggtctcccacagctgctggcgatcccttc
cccatgtttccctctgggtcacgctctctgtcacccacacactttttgccaccacccaca
gagaaggcattcacttctaagccccttcccttctggacaaagtttgatgtggctgattgg
ttggaatatttgaacttgggggagcatcgtcagcactttttggagaatgagatagatggc
agtcaccttccatccctgaccaaggaagattatatagatttgggagtgacccgtgtaggt
caccgcatgaacattgaacgtgcactgaagttcttcctggagaggtga
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