Geotrypetes seraphini (Gaboon caecilian): 117368253
Help
Entry
117368253 CDS
T09159
Symbol
TOB1
Name
(RefSeq) protein Tob1
KO
K14443
protein Tob/BTG
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
117368253 (TOB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117368253 (TOB1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
117368253 (TOB1)
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
117368253 (TOB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BTG
PAM2
Motif
Other DBs
NCBI-GeneID:
117368253
NCBI-ProteinID:
XP_033817602
UniProt:
A0A6P8SGR1
LinkDB
All DBs
Position
10:25350046..25353948
Genome browser
AA seq
324 aa
AA seq
DB search
MQLEIQVALNFIISYLYNKLPRRRVNIFGEELERLLKKKYEGHWYPDKPYKGSGFRCIHI
GEKVDPVIEEAAKESGLDIDDVRGNLPQDLNVWIDPFEVSYQIGEKGQVKVLYVDDNNNE
SGYELDKEIKNSFNPEAQVFMPISDPASSVSSSPSPSFGNSASVSPTFMPRSSQPLTFTT
ATFAATKFGSTKMKNSGRNNKIARASPTNLGLNVNNLLKQKTISSSVHSLYGLGLGNQQQ
QQKTSALSPNAKEFIFPNLQGQSSGNGIFPGDSPVNLNPLQYSNAFDMFAAYGGLNEKSF
MDGLNFSLNNMQYSNQQFQPVMAN
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttgaaatccaagtagcactcaattttattatttcatatttgtacaataaactt
cctcgaagacgagttaatatttttggagaagagttggaaagacttctgaagaaaaaatat
gaagggcactggtatccagacaagccatataaaggatcagggtttagatgcattcatata
ggggagaaagtggaccctgtaatagaagaagcagccaaagagagcggtttggatattgat
gatgttcgtggaaatctgcctcaggacctcaatgtttggattgacccatttgaagtttca
tatcaaattggtgaaaagggacaggtgaaagtgctttacgtggatgataacaataatgaa
agtggatatgagttggataaggagatcaagaacagctttaacccagaggctcaggtgttt
atgccaatcagtgacccagcctcttcagtgtccagttctccatcaccttcctttggcaat
tctgcttctgtaagccctacattcatgccccgatcctctcagcctttaaccttcaccact
gccacttttgctgccactaagtttggttcaaccaaaatgaagaatagtggccgtaacaat
aagattgcacgcgcctctccaaccaaccttggcttgaatgtgaataaccttttgaagcag
aaaaccatttcctcctctgtgcactctctgtatgggcttggcctgggtaaccagcagcaa
cagcagaagacttctgctctttctccaaatgccaaggagttcattttccctaacctccaa
ggtcaaagcagtggaaatggaatatttccaggtgacagccctgttaacctcaatcctctc
cagtacagcaatgcctttgatatgtttgcagcctacggtggtctcaatgagaaatcattc
atggatggcttgaattttagcttaaacaacatgcagtattctaaccagcaattccagcca
gtcatggccaactaa
DBGET
integrated database retrieval system
