Geotrypetes seraphini (Gaboon caecilian): 117368275
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Entry
117368275 CDS
T09159
Symbol
GLE1
Name
(RefSeq) nucleoporin GLE1
KO
K18723
nucleoporin GLE1
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03013
Nucleocytoplasmic transport
gsh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117368275 (GLE1)
03015 mRNA surveillance pathway
117368275 (GLE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsh03019
]
117368275 (GLE1)
Messenger RNA biogenesis [BR:
gsh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117368275 (GLE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
117368275
NCBI-ProteinID:
XP_033817658
UniProt:
A0A6P8SMW1
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All DBs
Position
10:49841799..49935901
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AA seq
694 aa
AA seq
DB search
MQPKRRWETLEALRKSRKGCLPYYRDPLLQGENMLEGCRSSPKLSTYSGWVLDQLNTKPL
LNTICSDSSTAQESNLPVISLKDTLFPSLHLTSALSTSEAATLTESLDLHLPQMEHEPSL
MLLSPRAVEIEGCIRQYQKIHRTKGKEELQERQEQQEQLGKNVSDFASEQLKRFEELLEL
KHRQECQNLRELMEKGCKEALGQQEKLKEEHRHRAKVLKLKLREAEQARQRQEEGRERLH
NLYAIQEEVLQLNQQIDPNYKQKELLRMDISGYSSRGNQICGLVSGLIRTCSEQGFPTQE
DMSNGDRALQDMRDLIRNLQQDLAAAVEEKRRKDKEEAMMREKEEALNQVQEMKTQTPAP
VPTQEPRHKKKTDLQVKADATVMIWYQQLKDSCAQCVASFSVLTSSKDPQIKRLKMELQK
AATIPVSQISTIAGSQLKEIFDKINNLLSGKQILCAGRMVSVTQHPHSLDFVYYKLAEKF
VKQGEEEVASHHEAAFPIAVVASGIWELHPRVGELILAHLHKKCPYSVPFYPAYKEGTPT
HEYQRALGYQVEDSKVEQQDNFLKRMSGMIRLYAAIIQLQWPYGTKQGPHPHGLNHGWQW
LAQMLNMEPLVDVTATLLFDFLEVCGNALMKQYQTQFWKLILLIKEDYFPRIEMITSSGQ
MGSVTRLKQFLQQCLQQKEVPLPKGALTSTFWRT
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgaaacggcggtgggagacgctggaggcccttcggaagtctcggaaggggtgc
ctgccctattaccgggacccgttgctgcagggagagaatatgttagaaggctgcaggtcc
tctccaaaactttcgacctattctggttgggtcctagatcagttgaacaccaagcctttg
ttgaacaccatatgctctgacagctccacagcccaagaatccaatctccctgtgatttct
ctgaaggatacactctttccttcgcttcatttgacatctgcactctctacatcagaagca
gcaactttgacagagagtcttgatcttcatcttcctcaaatggagcatgaaccctctctc
atgttgctgtcacccagggctgtagagatagaaggctgcatccggcaataccagaagatt
cacaggaccaagggcaaggaggagctacaggaacggcaggagcagcaagaacagctgggc
aaaaatgtgtcagattttgcatctgagcagctgaagcgctttgaggaactgctagagctg
aagcatcggcaagaatgtcagaacttacgagagttgatggaaaagggctgcaaggaggct
ttgggtcaacaagagaaactaaaggaggaacatagacacagagcaaaggttctgaagctg
aagttaagggaggcagagcaggctaggcagcggcaggaggagggtcgggaaaggctgcac
aatctctatgctatccaggaggaggtacttcagcttaaccaacagattgaccccaactac
aaacaaaaagaactattgcgtatggacatctcggggtacagcagtcgtggcaatcagatc
tgtgggctggtgtcagggcttatccggacttgcagtgagcaaggattcccaactcaggag
gatatgagcaatggtgatcgagcactacaggacatgcgggatttgattcgcaatttgcag
caggatcttgctgctgctgtggaagagaaaaggaggaaggataaggaagaagcaatgatg
agggaaaaggaggaagcactaaatcaagtacaagaaatgaaaactcaaacacctgctcct
gtacctacacaagaaccaaggcacaaaaagaagacggacttgcaagtgaaagcagatgcc
actgtgatgatatggtaccagcagctcaaggatagttgtgcacagtgtgttgcatccttc
agtgtgctcacaagcagcaaagaccctcagataaaaaggctgaagatggagcttcagaag
gcagccacgatccctgttagtcagatttctaccattgcaggctctcagctgaaggagata
tttgacaagatcaataacctgctctcagggaagcagatactatgtgctggtcgaatggtc
tctgtaacacaacatccacacagcttggactttgtgtattataaactggctgaaaaattt
gtgaaacaaggagaggaagaagtagcctctcaccatgaagctgcatttccaattgctgtg
gtagcttctggaatttgggagctgcacccaagggtaggagaactcatcttggctcaccta
cacaagaaatgcccctactcggtacccttctatcctgcatataaagaaggaacaccaacg
cacgagtatcaaagagcacttggttatcaggtggaggacagcaaggtggagcaacaggat
aacttcctgaagcgaatgtccggaatgatccgtctttatgctgccatcattcagctacaa
tggccttatggaacaaaacaagggccacatcctcatggactgaaccatggctggcagtgg
ctggctcagatgttaaacatggaaccactggttgatgtgacagctactctgctatttgat
ttcctggaggtatgtgggaatgcattgatgaaacagtatcagacgcagttctggaagctg
atcttactaatcaaagaggactatttccccaggattgaaatgattaccagctctggacag
atgggctctgtgactcggctcaagcagtttttgcagcaatgtttacagcaaaaagaggtt
cctctgcctaaaggagcgctgacatctacattctggagaacgtga
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