Geotrypetes seraphini (Gaboon caecilian): 117368286
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Entry
117368286 CDS
T09159
Symbol
POLR2I
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03020
RNA polymerase
gsh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
117368286 (POLR2I)
09124 Replication and repair
03420 Nucleotide excision repair
117368286 (POLR2I)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsh03021
]
117368286 (POLR2I)
03400 DNA repair and recombination proteins [BR:
gsh03400
]
117368286 (POLR2I)
Transcription machinery [BR:
gsh03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
117368286 (POLR2I)
DNA repair and recombination proteins [BR:
gsh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
117368286 (POLR2I)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_TFIIS
Zn_ribbon_recom
Ogr_Delta
Zn_ribbon_GRF_2
HVO_0758
TtuA_LIM_N
Zn_ribbon_NrdR
Motif
Other DBs
NCBI-GeneID:
117368286
NCBI-ProteinID:
XP_033817683
UniProt:
A0A6P8SMY5
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All DBs
Position
10:complement(128985567..129002080)
Genome browser
AA seq
125 aa
AA seq
DB search
MEVDGTYEPGFVGIRFCQECNNMLYPKEDKENRILLYACRNCDYQQEADNSCIYVNKITH
EVDELTQIIADVSQDPTLPRTEDHPCQKCGHKEAVFFQSHSARAEDAMRLYYVCTAPHCG
HRWTE
NT seq
378 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatggcacttatgagcctggctttgtggggatccgtttctgccaggaatgc
aataacatgttgtaccccaaagaagataaagaaaacagaatcctgctgtatgcttgtcgt
aactgtgactatcagcaggaagctgataacagttgtatctacgtcaataagatcacgcat
gaagttgatgagttgacccagatcattgctgatgtctcccaggacccaacgctacctcga
acagaagaccatccctgtcagaagtgcggacacaaagaggccgtcttcttccagtctcac
agtgctagagctgaggatgccatgagactgtattatgtgtgcacagcgcctcactgtgga
catcgatggactgagtga
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