Geotrypetes seraphini (Gaboon caecilian): 117368310
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Entry
117368310 CDS
T09159
Symbol
USP43
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsh01002
]
117368310 (USP43)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117368310 (USP43)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117368310 (USP43)
Peptidases and inhibitors [BR:
gsh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117368310 (USP43)
Ubiquitin system [BR:
gsh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117368310 (USP43)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
117368310
NCBI-ProteinID:
XP_033817736
UniProt:
A0A6P8SSI6
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Position
10:39081445..39562655
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AA seq
1194 aa
AA seq
DB search
MGDRGSPSPEGKERAAKKSPGSRRLLFRKKSLRSVGNFVHRVLKTLSTLSHFGEPERAAH
PEDDDGGFRQGPPGTCQGAEPEQPRTISASRAAEGQGASRDRLPGGSGDKTPGVQGLKNH
GNTCFMNAVLQCLSNTDLLAEFLGLERYKAELARSRLHGLLARSGGEGEVTEQLAALVRA
LWTLDYTPQLSVEFKNVVSKHGSQFRGNSQHDALEFLLWLLDKVHEDLNSSPGQKPKTLP
KPLPGPEENSANTQVTLQPMGGHSFVQEHFQAQYRSSLTCPHCLKQSNTFDPFLCVSLPI
PLRQTRALNVTLVFHSKHQRFLRIGLAVPLFGAVAVLREMVASEGKIHPEQVILVELYSN
GFQRSFSDDEDLNSIAEGDVVYAFQTLAPVTKAGGTSRGSGYPQSLPSSPYSSEPEGKKL
PPSGAFSSEFLPHGGLGKILILLCNTEGSGQQASRFGPPLLMREDRAISWDQLQQCVLSN
MRYLMRSEAQVQNVGVLFRIRAAGGTVAGSYLSPQDGRPLYHPAVDRALQFSGLGGLAHV
KLIVEWDPKTKERLFGNIQEEVVQDAESVGLQQQAHQQQHICTLDECFQLYTKEEQLAPD
DAWKCPHCKVLQQGMVKLNLWTLPDILIIHLKRFRQVGERRNKLSTLVKFPLTGLDMAPH
VVKRTQGSKNTQNQWASWKQPPYHPEHCQPDVLYDLYAVCNHHGSMQGGHYTAYCHNSLD
ARWYSYDDSNVELVQEEDIITRGAYILFYQKRNTIPTWSASSSMRGSTSSSLSDHWLVRL
SGNNRESFVSRCSANGPVLPKTPNSPVFSDCEPSAEKGGFESRPFVRGIQGRSVSLKATT
GSKTKQGITKTIPLRWSFGSKERTQGASGELVEYLESGRRPRYTNESIIPLMTGAANAES
GPPVSKPMLNSATATKDQDVRATERISGSLQGDTSVDLIESQNNNHAATEKTKNTKRNSK
PKEDASLQRRTSKSLINMVSRPKSEEPARSKGGGNKVNSNGSVHSGNSLPSNNFGKDKGI
SGKNGDCDQRTSSKSRGNGSPRASELERQREGKLKIFRNSFLKKDSKKPAESERHRASET
LNGSSRTSLSNGTLSAISDGRVNGMLPHQNKEELTKGRISRSEQDIKQSQSASSIQSKAD
WSLRRSASLHKNGDASHQQTRSVPVEKSSYGTLQRMKYHTASLGRKKSVPESSF
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatcgcggcagcccctcgcccgaggggaaggagagggcggcgaagaagagcccg
ggctcgcggcggctcctcttccgcaagaagtccctgcgctccgtgggcaatttcgtgcac
cgggtgctgaaaactttgagcactttgtctcacttcggggagcctgagcgggctgcccac
ccggaggacgacgacgggggctttaggcaggggccgccgggcacctgccagggcgccgag
cccgagcagccccgcacgatcagcgccagccgggcggccgaagggcagggcgcgagccgg
gaccggctgcccggcggctcgggcgacaagacccccggcgtgcaggggctgaagaaccac
ggcaacacctgcttcatgaacgccgtgctccagtgcctgagcaacaccgacctgctggcc
gagttcctggggctggagcgctacaaagccgagctggcccgctcccggctgcacgggctg
ctggcgaggagcggcggcgagggcgaggtcaccgagcagctggccgccctggtgcgggcg
ctctggaccctggactacaccccgcagctgtccgtggagttcaagaatgttgtctccaag
catggctcccagttccgtgggaattcccagcacgatgccctggagttcctcctctggctg
ctggacaaagtacatgaagacctcaattcgtcacctggccagaagcccaagacattaccc
aagcctcttcctggccccgaggagaattctgcaaacacacaagtaaccctacagcccatg
gggggtcacagctttgtacaggaacacttccaggcccagtacaggtcatccttaacatgt
cctcactgcttaaagcagagcaacacctttgatcccttcctgtgtgtttcattgcccatc
cccctacgtcagaccagggccttgaatgtcactttggtcttccattccaagcaccagagg
tttcttcggataggtctggcagtacctctctttggcgctgtggcagttctcagggagatg
gtagccagtgaggggaaaattcacccagagcaggtgatcctggtggagctgtattcaaat
gggttccagcgatctttctcagatgacgaggatctgaattccatcgctgagggtgacgtc
gtgtatgccttccagactctggcaccagtcacgaaagccgggggcacctctcgcggctca
ggttaccctcagagtcttccatcttccccttactcgtctgaacctgaaggaaagaagctg
cccccatcgggggctttttcatctgagttcctgccccatggaggccttgggaagattctg
attctcctctgcaacacggagggaagtggacaacaagccagcaggttcggtcctcccttg
ctgatgagagaagacagagccatctcctgggatcagctccaacagtgtgtcctcagcaat
atgcgttacctgatgaggagcgaagcacaggtgcagaatgtgggagttttatttcgtatt
cgggctgctggaggcacagtggctggcagttacctctctcctcaggatggaagaccgctt
tatcatccagctgttgatagagcattacagttcagtggacttggggggcttgcccacgtg
aaactcatagtagagtgggatccaaagaccaaagaacgcttgttcggaaatatccaggag
gaggtggtgcaggatgccgagagcgtggggctgcaacagcaggcacaccagcagcagcac
atctgtaccttggatgagtgtttccagctgtataccaaggaagagcagcttgccccagat
gatgcctggaaatgcccccactgcaaagtgcttcagcaaggcatggtgaagctgaacttg
tggactttgccagacatccttatcatccatctgaagaggtttcggcaggtgggcgagcgg
agaaataaactttccacgctggttaaattcccccttactggactggacatggctccccat
gtggtcaaaaggactcagggtagcaaaaacacgcaaaaccaatgggcttcgtggaaacag
ccgccataccaccctgagcactgccaaccagatgttctgtatgatctctatgctgtttgc
aatcatcatggaagcatgcaaggaggacattacacagcatactgccacaactccctggac
gcccgctggtacagctatgatgacagcaatgtggaactggtccaagaggaggatattatc
acgcggggggcctacatccttttttaccagaaaagaaacaccattcctacctggtctgcc
agcagctccatgagaggatccaccagctcatccttatctgatcactggcttgtgagactc
agtgggaacaatagagaaagctttgtgtccaggtgctctgcaaatggccccgtcctgcct
aaaacgcccaattcgccagttttcagtgactgcgagcccagtgcggaaaaaggaggcttt
gagtcaaggccatttgtgcgtggtatccaagggagaagtgttagccttaaagccacaact
gggtcaaaaactaagcaaggaatcaccaagacaataccccttcgctggtcctttggttca
aaggagaggacacagggagcctcaggtgaactggtggagtatctggaatccgggcgtaga
cctagatatacaaatgaatccatcattccattgatgactggtgctgccaacgcagaaagt
ggacctccagtatctaaacctatgctgaactctgcaactgctacgaaggatcaagatgtt
cgagcaactgaaaggatcagtgggagtttgcaaggtgatacttcagtggaccttattgaa
agtcaaaacaataatcacgcagccacagaaaagactaagaacacaaagagaaatagtaaa
ccaaaggaggatgcatcccttcaaagaagaacttcaaaatctctaataaatatggtgtca
cgaccaaaatcagaagaaccagctcggtcaaaaggtggtggaaataaagtgaactcaaat
ggaagtgtccattcagggaatagtttgccttctaacaattttggtaaagacaaggggata
tcaggaaagaatggtgattgtgaccaaagaacctctagcaagagcagaggcaatggcagc
ccaagagcgtcagaactggaaaggcaacgtgaagggaaacttaaaatttttagaaacagc
tttctcaagaaggactccaagaagcctgctgaatctgagagacacagagcatcagaaact
ctaaatgggtcatccagaacttcgctctctaatgggaccttgagtgctataagtgacgga
agggtcaatggcatgctaccacatcagaacaaggaagagctgactaagggaagaattagc
aggtcagagcaggatatcaaacaatctcagtctgcttccagcattcaaagcaaggcagat
tggtctctaaggagatccgcctccctacacaagaatggagatgcttctcaccagcaaacc
aggagtgtgcctgtagaaaagtcctcgtatggtacattgcaaagaatgaaataccatacg
gcatccctgggcaggaaaaaatcggtgcctgaatccagtttctaa
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