Geotrypetes seraphini (Gaboon caecilian): 117368951
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Entry
117368951 CDS
T09159
Symbol
SOX18
Name
(RefSeq) transcription factor SOX-18
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsh03000
]
117368951 (SOX18)
Transcription factors [BR:
gsh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117368951 (SOX18)
SSDB
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Motif
Pfam:
Sox17_18_mid
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117368951
NCBI-ProteinID:
XP_033818653
UniProt:
A0A6P8SQZ0
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All DBs
Position
11:complement(83656306..83663375)
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AA seq
394 aa
AA seq
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MNVSEPSYCTEEISQARGGDCSWVPTPLSGCEPRPSSPQSSTRFGFGTSVEGKPRSTSAS
PEPSYGFSPEQKCSAIAGDSRIRRPMNAFMVWAKDERKRLALQNPDLHNAVLSKMLGQSW
KALSTSDKRPFVEEAERLRIQHLQDHPNYKYRPRRKKQAKKIKRIEPNILLRNLSQPCSE
AFIPMNHPSAPQHHPSLNHFRELHSLGSEMESYGLPTPEMSPLDVLEESEPAFFPPHMQE
DCSVMSLRGYHQQLEFEPEKSIIRELAMVYSQAPGNMTDVLRTPHLSSIYYNQMRPGPQN
VLSPHLGQLSPPPETNPIETVEHLNQAEFWTDVDHNEFDQYLNMSRTRYEVPRQAYHVSL
PKAAPRTISCEESSLISALSDASSAVYYSPGITG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtatctgagcctagctactgcacagaggagatatctcaagccaggggaggtgac
tgttcatgggtcccaaccccactctccggctgtgagcccagacccagcagtccacagtcc
agcacaaggtttggatttggtacatctgtggaaggaaagcccagatcaacctctgcaagc
ccagagccaagctatggattcagtcctgaacaaaagtgctcagctatagcgggggattcc
cgaattcgtcgccctatgaatgcattcatggtctgggctaaggatgagaggaagagattg
gctctacagaaccctgacttgcacaatgctgtgttaagcaagatgctaggccagtcatgg
aaagccttaagcaccagtgacaaacgtccgtttgtggaggaagcagagaggctgaggatc
cagcatctgcaggaccatcccaactataagtatcgcccaaggagaaaaaaacaagccaag
aaaatcaaaaggattgaacccaatatcctactgcgcaacctctcgcaaccgtgcagcgag
gcctttatcccgatgaatcaccccagtgccccccagcatcatccttcactgaaccacttc
agagaacttcactctctggggtcagagatggaaagctatggtttaccaactcctgaaatg
tctcccttggatgtcctggaagagagtgagcctgcattcttcccacctcatatgcaagag
gactgcagtgtcatgtccttaagaggttaccaccagcagttggagtttgagccagagaag
tctattatacgggaactagcaatggtctactcacaggctccaggaaatatgaccgatgtc
ctcaggactccacatctctcctccatatactacaaccagatgcgccctggtcctcagaat
gtcctttctcctcacttgggccagctctcaccacctcctgaaaccaaccccattgaaacc
gtggagcacttgaaccaagctgagttttggacagatgtggatcataatgaatttgatcag
tatttgaatatgagcagaactcgttatgaggtcccaagacaggcttatcatgtctcattg
cccaaggcagctcccagaacgatctcttgtgaagaaagcagtttaatatctgccttatca
gatgccagcagtgctgtgtattatagcccaggcatcacaggataa
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