Geotrypetes seraphini (Gaboon caecilian): 117368969
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Entry
117368969 CDS
T09159
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gsh04121
]
117368969 (RBBP6)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117368969 (RBBP6)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
U-box type E3
117368969 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-CCHC
zf-C3HC4_3
zf-RING_5
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117368969
NCBI-ProteinID:
XP_033818683
UniProt:
A0A6P8SR16
LinkDB
All DBs
Position
11:complement(2350406..2569645)
Genome browser
AA seq
1706 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVIGTSKAIDDSSTSISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPTYTCYRCGKPGHYIKNCPTNGDK
NFESVPRIKKSTGIPRSFMMEVEDPNMKGAMLTNTGKYAIPTIDAVAYAMGKKEKPPFLP
EEPSSSSEDDDPIPDELLCLICKDIMNDAVVIPCCGNSYCDECVRTSLLESEDHMCPTCH
QTDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQPVPPPRQPQRPQAQHSVPPVSRPIP
SRQQDPLITPVTSASSHASSPVTSSIPSQSLATTVPASQPPVVTVDTSVTLPASVCPEKQ
DTPFHETDKNITQTTVIPSTPLSSVSSSSMMEEKGYQVPVLGQPPSQGHSIPTTGQPMRT
SAPRPPSNRPAWEGSNRGRQHSERTPRTQAPVLPASAPVYVPPPPLFPPPPHGLPLPPGV
PPPQFPPQFPPGQPPPAGYNVPPPGYPPAPANISTPWVSPAVPQAGISNTIPAPAQAPPL
SREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRSFSRSKSPYSGSTYS
KSSYSYSKSRSGSSRSRSYSRSFSRSRSRSYSRSPPYPRKGRGKNRNYRSRSRSHGYHRS
RSRSPPYRRYHSRSRSPLYRAPSPNKRSVPPGENEREYFNQFREAPPYEMKAYFGRPNEF
RDPYDKERLRDWEKYREWYEYYKNYGSGNQPRPRSPVSRENFSPDRFGPPPTRRDNSPYV
RGRREEYSSGQALRNRNLGGGNFQEKPPNRESHPVKDALKSKDKDAENPVGDGKGNKHKK
HRKRRKGEESESFPCSDSLENARKQRDLTGEENKNDSVLMPQNKDDATPVRDEPMEAEAV
SLKPMSEKEKKEKLKAKTDKTKRKTEGGVLKKENVAKSTRVAQEKLSEADPEKSPRTEPP
LKKAKEESQKGENIKQEDKVAPVPRKVHLKTTKEQDSKPAKEEKVKKEMKAEKPLKEEKS
KKTTEKSKTTDPKSEKRKRKEEKVLEDPEHSAVKLLKAETGEPGKALPKGNSESDSIKSE
KSLENEKNSSATAPAKKIKLNREMGKKIVSGESVAMTEVATGKPEASATKVKQDKGKGKM
RRKVHAADGSSSTLVDYTSTSSTGGSPVRKSEDKPDMKRTVIKTMEEYNNDITAPAEDVI
IMIQVPQSKWDKDDFESEEEDVTSPQAPSSLGKPVSVVKSVGLIKTLNPIRQGEKEVDSS
EKLKLSKDSHSEGCQLDLKTSKAPTMHEKSRAKERDQAVSNKESSEKKKSSTHQEKNNNS
ERTNDQGSQRSHTQSSKEKQEMGRMSSVKENSSSRDYPSSKRRDDRNETAKRKESSPRNR
ESTSGQKTKSRDAHTELARKGAGDSRRSNYSPLRDRRQLSDYKASSDSRRLNDQKMEKSS
GKEKEKHMSKPRSNERELTGNRESQPRHTSPDKNEKEDISKSKTLLSRSSRLSTDLTRET
DEASFVPDYNESDSDSNLSVKDEEPGTNSGEAKEKLERSKGETAERAVGNGSQSSASVSP
SESQPRSRSSSASSAGSQDSKKKKKKKDKKKHKKHKKHKKHKKHITGNESESEKSQKHKH
KKKKSKKSKEKDKEKEDLKLKSSVSL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcactataagttctcctccaaactgaactatgacaccgtcaccttcgac
gggctccacatctcgctctgtgacctgaagaagcagatcatgggtcgagagaagctgaag
gcggccgactgcgacctgcagatcaccaacgcccagactaaggaagaatacacagatgat
aatgccctaattccaaagaactcatcggtaattgttaggaggattcctattggaggagtc
aaatctacaagcaaaacatatgtcataagtcgaactgagccagtgattggaacatcaaaa
gcaattgatgactcttctacatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagctatgatgtctcaatctggccat
gaatatgatcctatcaattacatgaagaaacctcttggcccaccaccacctacttatacg
tgttatcgttgtggaaaacctggccattatatcaaaaactgtccaacaaatggagacaaa
aattttgagtctgtgcccagaattaaaaagagtacaggtattcccaggagttttatgatg
gaggtggaagatccgaatatgaaaggtgccatgcttacaaacactggaaaatatgcaata
ccaactattgatgcagtggcatatgcaatgggaaaaaaggaaaagcctccctttctacca
gaagaaccctcgtcctcatccgaagatgacgaccctattccagatgagctgctgtgtctt
atctgcaaagatattatgaatgatgccgtcgttatcccctgctgtggaaatagctactgt
gatgaatgtgttagaacctcgctgctggaatcagaggaccacatgtgtccaacctgccat
caaacagatgtgtcccctgatgctttgattgccaataaattcttacgccaggcagtgaac
aatttcaaaaatgaaactgggtacacaaaaagacttcgcaagcaaccagtgccaccacca
agacagccacagagaccacaggctcagcatagtgtgccgccagtttcgcggcccatccct
tctcgacagcaagatccactgataactcctgtaacctctgcatcatctcatgcttctagt
ccagtaacttcatccatcccaagccagtcattagcaacaactgtgcctgccagccaacca
cctgtggtcactgtggatactagtgtgacattacctgcctctgtatgtccagaaaagcag
gacaccccttttcatgagactgataagaacatcactcaaactacggtgattccttcgacg
cctctcagctctgtgagcagcagcagcatgatggaagaaaagggttatcaggttcctgtc
cttggacagccaccttctcaggggcattctattcctactactggtcagccaatgaggacc
agtgctcctcgtccacccagcaacagaccggcctgggaaggttccaacagagggcgtcag
catagtgagcgtacaccaagaactcaagccccagtgttgccagcatctgcacctgtatat
gtacctcctcctccattattccctccacctccccatggtctcccactccctccaggtgta
cctccacctcagtttcctcctcagtttcccccaggtcagccaccacctgctggatacaat
gtacctcctccaggctaccctccagctcctgctaacatatctacaccatgggtctcccca
gctgtaccccaggcgggtatttcaaacaccatcccagcaccagcacaagcaccacctctc
tccagagaagaattttacagagagcagcgcagactcaaagaagaggaaaaaaagaaatca
aagcttgatgagtttaccaatgactttgccaaggaactgatggaatataaaaagattcag
aaggaacgccggcgatccttttctagatccaaatcaccatatagtggctctacttactct
aaaagttcctattcctactccaaatcacgatctggctcctcacgctcacgctcttactct
cgatccttcagccgctcccgctcccgttcctattcaagatcaccaccttatccaagaaaa
ggcagagggaaaaatcgaaactatcgttcaagatcacggtcccatggctatcaccggtca
agatcaaggtcacctccttacagaagatatcattcacgctccagatctccactatatcga
gctccatctccaaacaaacgcagtgtacccccaggggagaatgagagagagtactttaat
cagttcagagaggctccaccctatgaaatgaaagcttactttgggagaccaaatgagttt
cgagatccttatgacaaggagcgcctcagagactgggaaaaatacagagagtggtatgag
tattacaagaattatggttcaggaaaccagcccagaccacggtcaccagtgagcagagag
aacttttctccagaccgttttggcccacctccaaccaggcgagacaattccccttatgta
cggggtcggcgagaggaatatagcagtgggcaagccctccgaaatcgcaatcttggtggt
ggaaacttccaagaaaaacctccaaacagagagagccaccctgtgaaagatgctctcaaa
tcaaaagacaaagatgctgagaatccagtgggggatgggaaagggaacaagcataaaaaa
catagaaagagaagaaagggtgaggaaagtgaaagcttcccctgttcagactcgttagaa
aatgcaaggaaacagagagatttgactggggaggagaataagaatgactctgtcctcatg
cctcagaataaggatgatgccactcctgtaagagatgagcccatggaagcggaagcagtt
tctttaaaaccaatgtctgaaaaggagaaaaaagagaaactgaaagcaaaaacagacaag
actaaacgcaagacagaaggaggtgtcctcaagaaggagaatgttgcaaaatctacacgt
gtggctcaagagaaactgtctgaagctgatcctgaaaagtccccacgtactgagccacct
ctgaaaaaggcaaaagaggagtcacagaagggtgaaaacatcaaacaagaagataaagta
gcacctgtccctcgcaaagttcatctcaaaaccacaaaagagcaagattccaaaccagca
aaagaagaaaaagtgaagaaagaaatgaaagctgaaaaacccctcaaggaagaaaagtca
aagaagactactgagaaaagcaagactactgaccccaaatcagagaaaaggaaaagaaaa
gaggagaaagtcctggaggatcctgaacattcagcagtgaagcttctcaaagcagaaact
ggtgaaccagggaaggccttaccaaagggaaattcagagtctgatagcataaaatcagag
aagtcccttgaaaatgaaaagaacagctctgccactgcccctgcaaaaaaaatcaaactg
aatagagagatggggaaaaaaatagtgagcggagaaagtgtagccatgacagaagtagca
actggtaaaccagaagcaagtgccacaaaagtgaaacaagacaaagggaaaggaaaaatg
aggcggaaagtgcatgcagccgatggatccagctctacactggtagattacaccagtacc
agctccactggaggaagccctgttagaaagtctgaggataagccagacatgaagcgaact
gtgataaagactatggaggaatataacaatgacatcacagccccagctgaagatgtcatc
atcatgattcaagttccccagtccaaatgggataaagatgattttgagtcagaagaggaa
gatgtgacatcaccgcaagcaccttcaagtttagggaagccggtcagtgtagtcaaaagt
gttggcctaataaagacactgaatcccataagacaaggtgagaaagaagttgattcttcg
gaaaagctaaaattgtcaaaagattcacattctgagggctgccagcttgacctgaaaact
tccaaagcacccacaatgcatgagaagagtcgggccaaagaacgggatcaagctgtttct
aacaaggagagctctgaaaagaagaaaagtagcacccaccaagagaagaataacaacagt
gagcgaacaaatgaccaaggtagccagagaagccacactcagtctagcaaagaaaagcaa
gaaatgggccgcatgtcctcggtcaaagaaaacagcagcagcagagactatcccagttct
aaacgtcgagatgataggaatgaaactgctaaaagaaaagaatcttctcctcgaaataga
gagtccacatctggacagaaaacgaaatccagagatgcacacactgaactggccagaaag
ggagcaggtgattctagaagaagtaactatagtcccttaagggaccgacggcagcttagt
gattacaaagcttcatcggattccagacggttaaatgatcagaaaatggagaagagttca
gggaaagagaaggagaaacacatgtcaaaacctagaagcaatgagagagaattaactggc
aatagagagtctcaaccaaggcatacatcacctgataagaatgaaaaggaagacattagt
aaatccaagacacttctcagtcgctcatctcgcctgtccaccgacctgaccagagaaaca
gatgaagcctcctttgttccagactataatgaaagtgatagtgacagcaatttgtccgtg
aaagacgaggagccaggcacaaattctggagaagccaaagaaaagttggagagaagtaaa
ggtgagacagcggaaagagcagttggaaatggaagtcagagcagtgcgagtgtaagccct
tcagaaagccagccacgaagtcgtagcagcagtgccagctcagcagggagtcaggacagc
aagaagaaaaagaagaaaaaggacaaaaagaagcacaaaaagcataaaaaacacaaaaag
cataagaagcatatcaccggcaatgagtcggaatccgagaaaagccaaaaacacaaacac
aagaagaaaaaatccaaaaagagcaaagagaaagacaaggagaaagaggacctcaaactg
aaatcttctgtctcactatga
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integrated database retrieval system
