Geotrypetes seraphini (Gaboon caecilian): 117369017
Help
Entry
117369017 CDS
T09159
Symbol
TMC5
Name
(RefSeq) transmembrane channel-like protein 5 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
gsh02000
]
117369017 (TMC5)
03037 Cilium and associated proteins [BR:
gsh03037
]
117369017 (TMC5)
Transporters [BR:
gsh02000
]
Other transporters
Pores ion channels [TC:
1
]
117369017 (TMC5)
Cilium and associated proteins [BR:
gsh03037
]
Other cilia and associated proteins
Stereociliary proteins
117369017 (TMC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
117369017
NCBI-ProteinID:
XP_033818783
UniProt:
A0A6P8SWS8
LinkDB
All DBs
Position
11:complement(28566518..28669107)
Genome browser
AA seq
850 aa
AA seq
DB search
MSYHYNEGFENDAYHYSDTLEIDRSRPSEKFSVPSKNPYGSDENYSDVRQRRMDYPEAIL
MASVQPASTNIQHASEHTAPYREPYNGGFSNLGFENENDPPSFISHSQDRYSDSFSTEAD
DNSKGTTRRNLSQTQMYKSTLFSTARESVNREEKLVLIKKLAGMPSRERIKAIKKLPKML
REKQEIRNRVQLMVKKESKTSGTQISCCADCLNSITVSFRRFKETLSDIKQALQLWQKTL
KVIGGTFGTSILSYFIFMRWLLAFNIFSFIINFSFITIPQLVDLRPNNLSFSGLELLTGS
GYFQETVLYYGFYTNSTIRKDENFAPYNMQLAYIFIIGLYLMICFLILVYSMAKSFRDNF
INPVMYTGNATKLLCSWDFKITHEKAVKLAHQNISTHIKEDLSENQEKLVLTSCQQAIRF
LIHLAIWTVTIGMAVGCCAAVYYLCNSRKKLMVSATSDIERQRESLLQPAVISLINLIMP
FVFSLFGLIEKFQSPKHQIYTIIFRNVILKLSIIGVLCYYWLQTIALGIKCWESFIGEDI
YRLVVFDFIFCLLGSFVGEFLRSIIGTRCCKTLGKPEFDIARNVLDLIYAQTLAWIGIYF
SPLLPLIQIIKLFILFYVKKESLRMNCLPPRKAWKASQMTTLFIFLLFFPSFTGVLVVIG
VTVWRRTPSEECGPFRGLNVPFDAISNWISTITGQVNLEWVVWIYDNLIKSELFFFILTL
LALIITYLYWQIIQGRKIMIKLLQEQIVNGGKDKMFLLQKLHKLQEMDGFNTGHSSVKQY
HKALNKSEENVQYSREQPQGLQSGALALAMRARQQADAEEHEQHLETNAHSALALALKAR
QEAEVDSDDY
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatcattacaatgaaggttttgaaaatgacgcgtaccactactcggacacgttg
gaaattgacagaagtagaccatctgagaaattctcagtcccctctaagaatccgtatggc
tctgatgaaaactatagtgatgtaagacaaaggaggatggattatccggaggccatatta
atggcatcagtgcaacctgcctctacaaacatccaacacgcttcagaacacactgcgcct
tacagagaaccatataacggtggattcagcaatcttggctttgaaaatgagaatgaccca
ccttccttcattagtcattcccaagatagatatagtgattctttctcaactgaagctgat
gacaattcaaaaggaacaaccagaagaaacctgtcgcagacacagatgtataaaagtacc
cttttcagtactgcaagagaaagtgtgaatagagaagaaaaacttgtcttaataaaaaaa
cttgcaggtatgcccagtcgtgaaagaattaaagcaatcaaaaagcttcctaaaatgtta
agagaaaaacaagagataagaaatagggtgcaactgatggtaaagaaggaatctaaaaca
tcgggcactcaaataagttgctgtgcagactgtctgaatagtatcactgtgtccttccgg
cgatttaaggaaaccctttccgatataaagcaagcattgcaactttggcagaaaactctg
aaagtcattggtggcacgtttggaacaagcattctttcatatttcattttcatgaggtgg
ctgctggcttttaatatcttttccttcatcattaacttcagtttcataacaatccctcag
cttgtggacttgagaccaaacaatctttcatttagtggactggaacttctcactggttct
ggttattttcaagagactgtgctgtactatggattttacaccaattctactatcaggaag
gatgaaaactttgctccttacaacatgcagctggcatatatttttattattggattatac
ctaatgatctgctttcttatcttagtgtacagtatggcaaaatcatttcgcgacaacttt
attaatcctgtcatgtacactggaaatgctacaaaactactttgctcctgggacttcaag
atcacccatgaaaaagcagtgaagctggcgcaccaaaatataagcactcacataaaggaa
gacctgtcagaaaaccaagagaagctggtccttacctcatgtcagcaggctattcgcttt
ctcattcatctggctatatggactgtcactatagggatggcggtgggttgttgtgctgcc
gtctactacctttgtaatagccgtaagaagctcatggtcagtgctacaagtgacattgaa
agacagagagaatcattactgcagccggctgtgatatccctgattaatctcatcatgccc
ttcgtcttctccttatttggattaatagagaagtttcaaagtcccaagcatcagatatat
accatcattttcaggaatgttattctcaaattatcaataattggtgttctttgctattac
tggcttcagactattgctttaggcattaagtgctgggaatcatttattggtgaagacatt
tatcgcttggtcgtgtttgatttcatattttgcttgcttggctcttttgttggtgaattc
ctgcgaagtattattggaaccagatgctgcaaaactcttgggaaaccagaatttgacatt
gcaagaaatgttttagatttaatctatgcacaaacattagcatggattggcatttatttc
tcacctcttctgccactcattcagatcataaagctcttcatactattttatgtaaaaaag
gagagtctgaggatgaactgcctgccccctcgcaaagcctggaaagcatctcagatgaca
acgctttttatatttctgctgtttttcccatctttcactggggtccttgttgtcattggg
gttactgtctggagacgaacaccctctgaagaatgtggtccttttcgaggcttaaatgta
ccatttgatgctatttctaactggatatctacaataactggccaagtcaatttggagtgg
gtggtgtggatttatgataatctaattaaaagtgaactctttttcttcatcctcacactt
cttgccctgattattacttatctatactggcagataatacaaggaagaaaaataatgatt
aaactccttcaggagcagattgtgaatggtggaaaagataaaatgtttctgctccaaaag
cttcacaaactacaagaaatggatggatttaatacaggccattcatcagtcaaacaatat
cataaggccttgaataagagtgaagagaatgtgcagtactctagagagcagccccaaggg
ctgcagtctggggccctggcacttgcaatgcgggctaggcaacaggcagatgcagaagaa
catgagcaacatctggaaacaaatgcacacagtgcattggctctggctctcaaggcaagg
caagaagcagaagtggattcagatgactattga
DBGET
integrated database retrieval system
