Geotrypetes seraphini (Gaboon caecilian): 117369029
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Entry
117369029 CDS
T09159
Symbol
REXO5
Name
(RefSeq) RNA exonuclease 5 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117369029 (REXO5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117369029 (REXO5)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
Pre-60S particles
RNases
117369029 (REXO5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RNase_T
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
117369029
NCBI-ProteinID:
XP_033818808
UniProt:
A0A6P8SIL6
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Position
11:complement(27222449..27308156)
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AA seq
789 aa
AA seq
DB search
MDEECERDGEHEDFAVDFKKKKIEKDGKNTNACKKPIKVKIAFVSPALFHVNGEISHEQI
HELLRYATLGKRHHAAQPSWCHLYHQRCLAGIVVLILQDASRLHFSSFFLQLTHLRKIFR
HRFGLPCPPSNFVSAVLGLQLNPTVQIREEACAEPSYLSRQDSSVPSNLKALDLSMDVQN
SPVGESGSKNRGLTRFLLSEEQMREEGYPILGLPNLRDFVHTGCSGKVTDLSPLFGLDCE
MCLTKQGKELTRVSLVDVGGHCVMDELVKPHNPVLNYLTSFSGITKEILQPVKTRLKDVQ
DKLKHLLPSDAVLVGHSINYDLQALQMIHPNVIDTSLLFTGNCGRKFKLKFLAEAFLGKE
IQRGDKLGHDSTEDARAALELVQFLILQESRKSAELSLSNTLVCPLKSNVSGNNMQAQPQ
LSCMPCDERSEALSEPSYGTSLTHPGFLDTLQSNGQRILVLGRKENKEFPSSSLSENIMC
TSNKEVLQRAKEEIPRSFISIVQFSLNTEYVQADLMEEMNEKMRMKMLQMSSVYVGPFRK
RFCLQSVRRIFQVFGPILSLHVVTETHQPFVCIQYEVLEAAQLAVETLNGTNVEGCCIKV
QRPVSEFTLDWDLMLKELEEDLVNEGIIYISGFKKTLTEKDLQQKFSHFKDIEAVFLPQD
HKTGKLKKYYFLKFSSSASAMDALQKINEQENGSGKIWGRKALTPSYFHEDAEFVPQDPE
SPPPSELFARGDARLDNDIKEVMKKLDKSIYKLYKTLQRNTLCVVLLPGTKSPHRSFSGF
GLIGIKEDN
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagtgtgaaagagatggtgagcatgaagattttgctgttgacttcaaaaag
aaaaagatagaaaaggatggaaaaaacacaaatgcatgcaaaaagccaatcaaagtgaag
atagcttttgtgtctcctgcattatttcatgttaatggagaaatcagccatgagcagata
cacgagctccttcgttatgccactctgggaaaacgccaccacgcagctcagccaagctgg
tgccatctttatcatcaaaggtgcttggcaggcattgtggttctaattctacaggatgca
agtcgacttcacttctccagtttctttctacagctcacccacctcaggaaaatcttcaga
catagatttggtttaccatgtccaccatctaactttgtcagcgcagtacttggactgcag
ttaaatcctaccgtgcaaataagagaggaggcttgtgcagaaccatcatacctgagcagg
caagattcatctgttcccagtaacctgaaggctttagacctcagcatggatgtgcagaat
tcacctgttggagaatctggaagtaaaaatcgtggtctgaccagattccttctgtctgag
gagcagatgagggaagagggataccccatcctaggattgccaaacttgcgtgattttgta
cacacaggatgcagtgggaaagtgacagaccttagtcctctctttgggctggattgtgaa
atgtgcctgacgaagcaaggaaaggagcttacacgcgtctcattagtagatgtcggtggc
cactgtgttatggatgaacttgtaaaaccacataatccagtactaaactacctcaccagc
ttttcaggaatcacaaaggagattcttcagccagtaaagaccaggcttaaagatgtccag
gacaaactaaaacatcttcttccctctgatgcagtgctagtgggccactctataaattac
gacctccaggctctgcagatgatacatcccaatgtcatcgacacatccttgcttttcact
ggcaactgtggtcggaaattcaagctgaagttcttagctgaagcttttctagggaaagag
attcaacgtggtgataagctgggtcatgattcaacagaagatgccagagctgcacttgaa
ttagttcaatttcttattctccaagaatccaggaagtctgctgaactcagtctgtccaat
acgttggtgtgccctctcaagagcaatgtgtctggaaataacatgcaagcccagcctcag
ctgtcatgtatgccgtgcgatgagcgctctgaagcattaagcgagccttcctatgggact
tcattgactcatccaggttttctagatacgttgcagtcaaatggccagaggatccttgtc
ttgggcagaaaggaaaataaggaatttccctcctcgagtctgagtgaaaacattatgtgc
acttcaaacaaagaggttcttcagagagccaaggaggagatccctcggtctttcatcagt
atagttcagttttcattaaatacggaatatgtgcaggctgacctcatggaagaaatgaat
gaaaagatgagaatgaaaatgttgcagatgtcaagtgtctatgttggtccattcaggaaa
cgcttctgcctgcagtctgtgaggaggatattccaggtgttcggccccatcctttcactt
catgttgtgactgaaacacaccagcccttcgtctgcattcagtatgaagtgcttgaagca
gcccagcttgctgtagaaacccttaatggaactaatgtcgaaggatgctgcattaaggtt
cagaggccggtttcggaatttaccctcgactgggacctcatgttaaaggaactggaagaa
gatctcgtaaatgaaggcattatttacatttctggatttaagaaaacccttacagagaag
gatctgcagcagaaatttagtcattttaaagatatagaagctgtgttcttgcctcaggat
cataaaactggaaaacttaaaaaatattattttctaaagttttcaagctctgcaagtgcg
atggatgcccttcagaaaatcaatgagcaggagaatgggtctgggaagatttggggcagg
aaagccctcacccccagctatttccacgaggatgcagagttcgtgcctcaggacccagag
agccctccacccagcgagctttttgcaaggggcgacgcacgtctggacaatgacataaag
gaggtcatgaagaaacttgacaagagcatatacaaactttataagacattacagcgcaat
actctttgtgttgtcctgttaccaggaactaagagtcctcaccgatctttttctggcttt
ggtttgataggaataaaagaggacaactga
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