Geotrypetes seraphini (Gaboon caecilian): 117369038
Help
Entry
117369038 CDS
T09159
Symbol
VPS35L
Name
(RefSeq) VPS35 endosomal protein sorting factor-like isoform X1
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117369038 (VPS35L)
Membrane trafficking [BR:
gsh04131
]
Protein recycling
Others
Retriever complex
117369038 (VPS35L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5667
Far-17a_AIG1
Motif
Other DBs
NCBI-GeneID:
117369038
NCBI-ProteinID:
XP_033818829
UniProt:
A0A6P8SJ61
LinkDB
All DBs
Position
11:complement(28262092..28415287)
Genome browser
AA seq
967 aa
AA seq
DB search
MTWKMASVQWHSRYRNYASELQCCRLEDVELETGEYHPLKPITVTESKTKKVGRKGSTSS
SSSSSSSSVLDPLSSVLDGTDPLSIFAATAEPLTTVANLDNGRKKREREENSAVGSDFEL
WPSKRGAILARYTTTEKLSINLFMGSEKGKTTSPGSAVSEKVRTRLEELDDLEEGSQKEL
LNLTQQDYINRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTAVIQFYPSKFVLITD
ILDTFGKLVYERILSMCVDNRGSLQDNFNPDDANDTAKETCLNWFFKIASIRELIPRFYV
EAAILKCNRFLSKTGISECLPRLTSMIRGIGDPLVAVYARAYLCRVGIEVAPHLKENLNK
NFFDFLVTFKQVHGDMVQNQLVAQKVEIPLYLTLYSPAIDWILQCIAYRAPEVLLTEMME
RCRKLGNNALLLNSVMSAFRAEFIAARSMEFIGMIKECDESGFPKHLLFRSLGINLALAD
PPENDRLQILNEAWKVITKLKNPQDYINCAEKWVEYTCRHFTKREVNTVLADVIKHMTPD
RAFEEAYPQLQSIIGKVIAHFHDFSVLFSVEKFLPFLDMFQKESVRVEVCKCILEAFIKH
QQELTKDPVILNALLHVCKTMHDSVNALTLEDEKRTLAGLINGFIKMVSFGRDFEQQLSF
YVESRSMFCNLEPVLIQLIHSVNQLAMETRKVMKGNHSRKTAAFVRACVAFCFITIPSLT
SIFSRLNLYLHSGQVALANQCLSQADAFFKAAVSLVPEVPKTISVDGKMRSSETFLLEFL
SNFFSSLLIVPDHPEQGVLFLVRGLLNVIEDYTWEDNSDDKIRIYTSVLHLLSAMSQETF
LYHVDKVDSNDSLYGGDSKFLTEINKLCETLISQILDHLKALGKDETLKRQSQLALSLFH
SILAHGDLRNNKLNQLAVNLWNLAQKHGFADTKTMVKTLEYIKKQSSQFEMRHFSELALR
LPLQSRT
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgacctggaaaatggcttccgttcagtggcattcaaggtacagaaattatgcatcagaa
ttgcagtgttgcaggttggaggatgttgaattggagacgggagaataccatcctttaaaa
cctattacggtcactgaatctaagaccaagaaagtgggccggaaaggaagcacctcttcc
tcgtcctcttcttcctcaagctccgtcctggacccactgagcagtgtgcttgatggaact
gatccgttgtcaatttttgcagcaacagcagaaccactgactacggtagccaacctggac
aatggcaggaaaaaaagggagcgagaagaaaattcagcagtcggaagtgactttgagcta
tggcccagcaagcgcggtgcgatcctggccagatacacaaccacagagaagctttccata
aatctgtttatgggatcagaaaaaggaaaaactacaagtccaggttccgctgtttcagaa
aaggtcaggacgagacttgaagaactggatgatttagaagagggatcccagaaagagctc
ttgaatttgacccagcaagattacataaaccggattgaagagctgaaccagtcgctaaag
gatgcttgggcctcggaccaaaaagtgaaagcgctgaaaatagttattcagtgttcaaaa
ctgctctctgacactgcagtgatccagttctaccccagcaagtttgtcctgatcacggat
atacttgacacatttggcaagctggtatatgaacgcattttgtccatgtgcgtagataat
cgtggctccttgcaagataattttaatccagacgatgcaaatgacactgctaaagaaacc
tgccttaactggttcttcaagatagcgtcgatcagggaactgattcccagattctatgtg
gaagctgcaatcctgaaatgcaacagattcctgtccaaaacgggtatttcagaatgtctt
ccacggcttacatctatgattcgagggatcggagaccctttggttgcagtctatgccaga
gcctatctgtgcagggttgggattgaagtggctccccatctgaaagaaaatttaaacaag
aacttttttgacttccttgtgacattcaaacaggttcatggggatatggtgcagaaccag
ctggttgctcagaaggtggagatcccactttacctgaccttgtactcacctgctattgat
tggatcttgcagtgtattgcttatcgtgctcctgaggttctgcttacggagatgatggag
aggtgtaggaagctgggaaacaatgctttgcttttgaactcggtcatgtctgcattccga
gctgagtttatcgctgcaagatcgatggagtttattggcatgattaaggagtgcgatgag
tcaggattccctaagcatcttctcttccgttctttgggaataaacctggccttggctgac
ccgcctgaaaatgacagacttcagatactcaacgaagcatggaaggttatcaccaaactg
aagaacccacaggattacattaactgcgcagaaaagtgggtggaatatacatgcaggcac
ttcacgaaacgcgaggttaatacagttctggctgatgtcatcaagcacatgactccggac
cgggcctttgaagaggcttacccacagcttcagtcaataattggaaaagtgattgctcat
tttcacgacttctcggttcttttctcagtggagaaattccttccctttttggacatgttc
cagaaagaaagtgtcagagtagaggtttgcaagtgcattttggaagcttttattaaacat
caacaagagctaacaaaggacccggtcatcctgaacgcacttttgcacgtttgcaagacc
atgcatgattctgtaaatgcactgactcttgaagatgaaaaaagaacgctggcaggtctg
ataaatggatttataaaaatggtttcatttggccgtgattttgagcagcagctgagtttt
tatgtggaatccaggtccatgttttgcaatctggagcctgtccttattcagctaattcat
agcgtgaaccagttggccatggaaaccagaaaggtgatgaaagggaaccattccaggaag
acggcagcatttgtgcgggcttgtgttgccttctgcttcattaccattccatctctgacg
agcatcttttcacgtcttaacctgtacctgcactccggacaggtagccttagcaaaccaa
tgcctgtcacaagccgatgcctttttcaaagctgctgttagtctggttcctgaagtgcca
aagacgattagtgtggatgggaagatgcgatcctcagaaacctttcttcttgaattcctc
agtaacttcttttctagtttgcttattgtccctgatcatccagagcaaggggtcttgttt
ctggtgcgagggctccttaatgtcattgaggattacacatgggaagataacagcgatgac
aaaatccggatctacaccagtgtattgcacctgctttcagcaatgagccaggagacattc
ctctaccatgtagataaagtggattccaatgacagcctctatggaggagactcgaagttc
ctgactgaaattaataagctttgcgagacccttataagtcagatcctggatcatctgaag
gccctcggaaaggatgagactttgaagcgtcagagccagctagcactgtcgctctttcat
agcattttagctcacggtgatctgcggaacaataaactgaatcagcttgccgttaacctg
tggaatctggcccagaagcacggctttgctgacacgaagaccatggtgaaaacattggag
tacatcaagaaacagagtagccagtttgaaatgaggcatttttctgagctggcactgaga
ctcccattgcaatctagaacctaa
DBGET
integrated database retrieval system
