Geotrypetes seraphini (Gaboon caecilian): 117369055
Help
Entry
117369055 CDS
T09159
Symbol
TSC2
Name
(RefSeq) tuberin isoform X1
KO
K07207
tuberous sclerosis 2
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04115
p53 signaling pathway
gsh04140
Autophagy - animal
gsh04150
mTOR signaling pathway
gsh04218
Cellular senescence
gsh04910
Insulin signaling pathway
gsh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
117369055 (TSC2)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117369055 (TSC2)
09143 Cell growth and death
04115 p53 signaling pathway
117369055 (TSC2)
04218 Cellular senescence
117369055 (TSC2)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117369055 (TSC2)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117369055 (TSC2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gsh01009
]
117369055 (TSC2)
Protein phosphatases and associated proteins [BR:
gsh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117369055 (TSC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tuberin
DUF3384
Rap_GAP
Cnd1
Motif
Other DBs
NCBI-GeneID:
117369055
NCBI-ProteinID:
XP_033818856
UniProt:
A0A6P8SX09
LinkDB
All DBs
Position
11:complement(4353210..4452841)
Genome browser
AA seq
1779 aa
AA seq
DB search
MMAKQQSKDSGFREKFKHFLGLTPSRISAKQSEGRQTEIIITAEILKELGAECGLNNRIK
TIYHISDLARTKRFEEHAVESVWREVADLMRPDQAAEAHHAVLHLLKAIIHGQGERLGFL
RARFFKVIKDYPSNEDLQERLEVFKALTDNGRDTTHLEEGLAEFVLQWMDVSLSSEFLQL
LVNLVKFNSCHLHQYIAPMVQMICLLCNRTASSVDIEVSLKVLDAVVCYNCLPSESLPGF
IITLCRTINVKELCEPCWKLMRNLLGTHLGHSAVYNMCRIMEDRMYMEDAAVLRGAVFFV
GMALWGAHRLPSLKNSPTSVLPSFYKAMTFPDAVVSYEIVLSITRLIKKYGRDLEAVTWD
ILLDVFERLVQQLQSLKSQELKSVVHDLLNTVEELYDLNEFHGSKERYFEVVERCAEQRP
ESSVVNLITYRAQSIHPAKDNWILHLQRLMERFFRNESRSAVRIKILDVLSFVLSINRQF
YEEELIELVVISQLSHIPEDKDHQVRKLATQLLVDLADGCNTHHFNSLLDILEKVVTRPL
SPPVDSGDGDSPSALEDVKTAVLGLLVILQTKLYSLPAMHATRVYEMLINHLQLHYKHLY
TSAIASSIRLQVFDFLLLLCADSRRRLGLPNKDGVVRFSPYCLCEASTEPEKRPSERKPP
GALSPPCGSPSVPSQGSGLRLASLPYSSVFGVLLQCLKQETDWKVLKLVLSKLPESLQYK
VLILTSPCDIDQLSASLCAMLGDRKIGERLHNTPDGFSRTDIQLAVVPVLTALTSYHKYL
DVTKQREMVRCLEMGLISRCAKQCVVSLSLCIVEMPEILLKTLPVLIVKLTHISATVTMA
IPMLEFLSTLVRLPHLYGNFAAEQYASVFAISLPYTNPSKFNQYIVCLAHHVIAMWFIRC
RLPLRRDFVPYITKGLRSNVLMTFDDTPEKGSFRARSTSLNERPKSLRLSKPVKQALNNY
SPVKDTKDSSAVDAFRARSISVSEHVVHSRMQTSITSSSLGSADESSMAQADDSLKNLHL
ELTETCLDMMARYVFSNFTAVPKRSPVGEFLLDGGRTKTWLVGNKLVTITTSVGRGTKSL
LGLDPGESPSSTEASFDPPLQVWQTKEAPAKLESQTSKQVSRGSRHRVRSMSGGHALRGV
VSQGLQAVPTSRAEKTASSSKPLRKEKRSLADFVPLLTQGWAEILVRRPTGNTSWLMSLE
NPLSPFSSDINNMPLQELSNALMAAERFKEHRETVLYKSLSVPSSSLATGTLKPSILQRS
KTDSDVVPEGEPVEMDFKNKDFSTESQEIEDFEPVTESAASEEGINQATKVYSRSSSISS
QDDKAQAPEELEVGGIPIEKSEAVVQNVSFQHSQTLSKSSSSPELLTLQELLSTTGEEEP
GKPKSQSGILEGERAIPSSSKEDENSSVVTAQSEPSFFSQYPHSPSGYRPRGHTISDSEP
SRRGRRLDRDPLRSRTTASNAEKVPGIDPSFVFLQLYHSPLFGDESNKPILVPNNQTFDR
AVKLLDQIPSYDTHKIGVLYVGEGQATNERAILSNEHGSYRYTEFLTGLGKLIELRETQP
DKIFLGGLDEFGEDGQFTYCWHDDIMQAIFHITTLMPNNDMDPGRSNKKRHVGNNFVNVI
YNDSGEFFKLGTIRGQFNFVHVVIKPLDYESNLVTLQCRKDMEGLVDTSVAKIVSDKNLP
FLARQMALHSNMASQVHHSRSNPTDIYPSKWIARLRHIKKLRPRIHEEIQEQNSMFPYNL
HPALPSKPPQQGQQASSATFETGQRTRLVSSVDDFTEFV
NT seq
5340 nt
NT seq
+upstream
nt +downstream
nt
atgatggcaaagcagcaaagtaaggattcgggattccgggaaaagttcaagcactttctt
ggtttgacaccatcgcggattagtgcaaagcagtcagaaggtagacagacggaaataata
attactgcagaaatattgaaggagctgggtgcagaatgtgggttgaataatcgaataaaa
acaatatatcacatctctgacctggcaagaaccaaaagatttgaagagcatgcagtggag
tccgtgtggagggaagtggcagatctgatgcggccagatcaagcagccgaagcccatcat
gcagtgctccatctgttgaaggcaatcattcatggacagggggaaaggctgggcttccta
agagcacgcttcttcaaggtcatcaaggactatccctctaatgaagatctacaggagcgg
ctggaggtttttaaagcccttacagacaatgggagagatacaacccatttggaggaagga
ctggctgagtttgtcctacagtggatggatgtcagtctgtcttcagaattccttcagctc
ctggtgaatttggtcaagttcaacagctgtcaccttcatcaatacattgctcctatggtc
caaatgatttgcctgctgtgtaatcgtacggcatcttctgtggacatagaggtttccctg
aaagttctggatgccgtggtttgctacaactgccttccctccgagagccttcctggtttc
atcattactctctgccgcaccattaacgtgaaggaactctgtgagccatgctggaagctc
atgcgcaacctgctgggaacacatcttggacacagtgcagtctataacatgtgccggatt
atggaggacagaatgtatatggaggatgcagcagtgctgaggggtgcagtgttcttcgtt
ggcatggcactctggggagcccatcggttgccttcactgaagaactcaccaacttccgtg
ctgccttctttctacaaggccatgactttccctgatgcggtggtgtcgtatgaaattgtc
ctgtccataacaaggctcataaagaagtacggaagagatctggaagctgtgacatgggat
attctcctggatgtctttgagagattagttcaacagcttcagtctttgaagagccaggag
ctgaagtctgttgttcatgatctattgaacactgtggaggaactttatgacctgaatgaa
ttccatggctctaaggagagatactttgaggttgtggagcgttgcgcagagcagcgacct
gaatcttctgttgtgaacttaattacgtacagagctcaatcgatccatcctgcaaaagat
aactggattctgcatcttcagaggttgatggagcggttcttcaggaatgagtcgcgtagc
gcagtccgcattaagattttggacgtgttgtcatttgttttgagcatcaatagacaattt
tatgaggaggagcttattgaactggtggtgatttctcagctctcgcacatcccggaagat
aaagatcaccaggtccggaaactggccacccagttattggtggatcttgcagatggatgt
aacacgcaccatttcaacagcctgctggatatcctggaaaaggtagttacacgccccctg
tcacctcctgttgattcaggagacggggactctccttcagccttggaagatgtcaagact
gcagttctgggcctcctggtaattctgcagaccaagctgtacagcctgcctgccatgcac
gccaccagagtgtatgaaatgctaataaaccacctccagctgcattataagcacctgtac
acctctgccattgctagcagtatccgactgcaggtgttcgacttccttctcctcctctgt
gcggactctcgccggcggcttggcctgcctaataaagatggggtggtgaggtttagccct
tactgcctgtgtgaggccagtactgagcctgaaaagagaccttcagaaaggaaacctcct
ggtgccttgtctccgccctgtgggagtcccagcgtcccctcgcaaggcagtggactgcgt
ctggcatccttaccatattcgtcggtgtttggtgtcctcctccagtgtctgaaacaggaa
actgactggaaggtgttgaagctggtgctcagtaaactgcccgaatcgctccaatataaa
gtcctgatcttgacatcgccctgcgacatcgatcagctctctgcttcgctttgtgccatg
cttggtgaccggaagattggcgagcggcttcataacaccccagatggcttctctcggaca
gacatacagctggccgtggttccagtccttaccgctctgacttcctatcacaagtacctg
gacgtgactaaacagcgggagatggtgcgctgcctggaaatggggcttatttctcgctgt
gctaagcagtgtgtagtgtccttgtcgctgtgcatcgtagagatgcctgagatcctgctc
aagacgctgcctgtcctcattgtcaagctgactcacatttctgccaccgtcacgatggcg
atcccaatgctggagtttctttcaactctggtcagactccctcatctctacggtaacttc
gctgccgagcaatatgccagtgtgtttgccatttctctgccctacacaaatccctccaag
tttaaccagtacattgtgtgcttagcgcatcatgtgatcgccatgtggttcattcgctgt
cgtctcccgctgcgcagggacttcgttccatacattacaaagggtttgcgatcgaatgtc
ctcatgacttttgacgataccccagagaagggcagcttcagagcccggagcaccagcctc
aatgaaagaccaaagagtttgaggctatccaagccagtaaagcaagccttgaataactac
tccccggttaaggacacaaaagactcttctgccgtggatgccttccgggcccgcagcatc
agtgtgtccgaacacgtggtccacagcaggatgcagacctccatcaccagctctagtctg
ggctctgcagatgagagctccatggcccaagcagacgacagcttgaaaaatcttcacctg
gagctgaccgagacgtgtctggatatgatggcaagatatgtcttctcaaacttcactgct
gtgcccaagaggtctcccgttggggagtttcttcttgatggtggaaggacaaaaacctgg
ctggttggtaataaactagtgactataactaccagtgtgggtagaggaactaagtcactg
ctaggtttggaccctggagaaagtcccagcagcacggaagccagctttgatccacctctg
caagtatggcaaaccaaagaagctccggcaaagttggagtctcagacgagcaagcaggtg
tccagggggtcccgtcacagagtccgatccatgtcaggtggtcatgccctgcgaggggtg
gtttcccaaggattacaggcggttcccacttcaagagcagagaagacggcttcctcctca
aaacccctacgaaaggaaaagaggagcttggcagactttgtgccattactgacccaaggt
tgggctgagatactggtccgcaggcccacaggtaataccagctggctgatgagtttggag
aatccgctcagcccattttcttccgatattaacaatatgcctttacaagaactgtctaat
gctctcatggcagctgagcgttttaaagagcatcgggagactgtgctgtacaaatctctc
tccgtcccgtcatccagcctggccacggggacattgaagccctccatactgcagcgctcc
aagacagattcggacgtagttccagaaggagagccagtggaaatggatttcaagaataag
gatttctcaaccgagtctcaggaaattgaagactttgaacctgttactgaatcggcagca
agtgaagagggaattaaccaagctaccaaggtgtacagtaggtcctcttcaatttcaagt
caagacgacaaagctcaggcccctgaggagttggaggtgggtggcattcccatcgagaag
tcggaggcagttgtgcagaacgtgtctttccagcactcccagaccttgagcaaatccagt
tcctcaccagagctgctgaccctgcaggagctgctcagcaccacaggtgaagaggaacca
gggaagcccaagtcgcagtctggaattcttgaaggggagagagccataccttcgtcctca
aaggaagacgaaaacagtagtgttgtaacggcccaatcggaacccagcttcttttcccag
tatccccattcacccagtggctaccggccaagaggacatacaatctcagactctgagcct
tccagaagggggcgaaggttagaccgagaccctttaaggagtaggaccacagcttctaat
gctgagaaagtgcctggaattgacccaagctttgtgtttttacagctgtaccattccccc
ttgtttggagatgaatcgaacaagccaatcctggttccaaataatcagacctttgacaga
gctgtgaagctgctggatcagattccttcttatgacacccacaagattggagtgctgtac
gtcggggaaggccaggctacgaatgagcgggccattctgtccaatgagcatggctcgtac
aggtacacggagttcctcactggcctagggaagctcattgagctccgggaaacccagcct
gataagattttccttggaggtctggatgagtttggcgaagatggccagtttacctactgc
tggcatgatgacataatgcaagcgatcttccacatcacaacactgatgccaaacaatgac
atggatccaggtcgtagcaacaagaagagacatgtgggcaataactttgtgaatgtgatt
tacaatgattctggggagttctttaagcttggaacgatcaggggtcaattcaattttgtg
catgtagtcatcaagcctctagactatgaaagtaatctggtcaccttacagtgtcgtaaa
gatatggaaggacttgtggataccagtgttgccaaaattgtatctgataaaaacctacct
ttccttgcccgtcagatggcgttgcactcaaacatggcgtcgcaggtccatcacagcaga
tcgaatcctacagatatttacccatccaaatggattgctaggttgcgccatatcaagaag
cttcgacccaggatacatgaagaaattcaagagcagaattccatgtttccgtacaacctt
caccccgcacttccaagcaaaccacctcagcagggccagcaggcttctagtgccaccttt
gaaaccggacagcgaactcggctggtctcctcagtggatgactttacagaatttgtataa
DBGET
integrated database retrieval system
