Geotrypetes seraphini (Gaboon caecilian): 117369130
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Entry
117369130 CDS
T09159
Symbol
CDH4
Name
(RefSeq) cadherin-4 isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117369130 (CDH4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gsh04515
]
117369130 (CDH4)
Cell adhesion molecules [BR:
gsh04515
]
Cadherins
Major cadherins
117369130 (CDH4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
He_PIG
Stevor
DUF5527
Motif
Other DBs
NCBI-GeneID:
117369130
NCBI-ProteinID:
XP_033819058
UniProt:
A0A6P8SSD7
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All DBs
Position
11:complement(94300731..95712577)
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AA seq
914 aa
AA seq
DB search
MSAGSGPVLLLLLVLAGFLRAQHIRDFTVRPTCVPGFSEEGYTALVSPNIPEGQKLLKVK
FSGCSRSRGVWYESSNLDYKVGADGTVFAARKLQIPSKQATFLVAAWDRRTPDKWETTVR
LLVDKNESKHREHKQEGKINPPPDVLQQPGSTLLPWRQHRDPNGLRRQKRDWVIPPVNVP
ENSRGPFPEQLVRIRSDKDQENLIRYSITGVGADQPPMEIFNIDPITGRMYVTRPLDREE
RSSYHLRAHAVDMNGNKVENPIDLYIYVIDMNDNRPEFANQVFNGSVDEGSKPGTYVMTV
TAHDADDVTTVNGIVMYRILTQSPQSPSQDMFVIHSETGAISTVAAGLDREKVQQYTVII
QATDTEGNLNHGLSNTATAIITVTDVNDNPPEFTSSIYYGEVPENSMDTVVANLTVVDRD
QPHSPNWNAMYKIISGDASSHFAIRTDPVTNEGLLTVVKPVDYEMNKAFMLTVMVTNQAP
LASGIQMSLLSTAGITISVMDVNEAPYFPNRNDPIKHYEGEPVGKVLTTFSAVDPDRYMQ
QALRYSKLSDPAKWLNINATNGQITTTAVLDRESAYIKDDIYEATFLATDNGVPPASGTG
TLQIYLIDINDNAPKLLPKEAQICDKPNSNAINITAADADRKPNGGPFVFELPSEVRRNW
TISRLNGNFARLSLQIGHLEAGVYDVPVIVTDSGNPPLYNTSIIKVKVCPCDNDGDCTTI
GAVTAAGLGTGAIIAILICIIILLTMVLLFVVWMKRREKERHTKQLLIDPEDDVRDNILK
YDEEGGGEEDQDYDLSQLQQPESMDHVLNKAAGVRRVDERPIGAEPQYPVRPVVPHPGDI
GDFINEGLRAADNDPTAPPYDSLLVFDYEGSGSTAGSVSSLNSSSSGDQDYDYLNDWGPR
FKKLADMYGGGEED
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggctccggtccagtgctgctgctgctgctcgtcttggctggctttctccgg
gcacagcacattagggactttacagtcagacctacctgcgtgccaggtttttccgaagaa
ggttacacagcactggtttccccaaatatcccagaagggcagaagctcctcaaagtgaag
ttcagcggctgcagcaggtccaggggggtttggtatgaatccagcaaccttgactacaaa
gtgggggcagatggtacagtgttcgccgctcgcaagctacagatcccttcaaagcaggcc
acctttctggtggccgcatgggaccgtcgaacccccgacaagtgggaaaccacagtacga
ttattggtggataaaaatgaatcaaagcacagggagcacaagcaagaaggaaaaattaac
ccaccaccggatgttctgcagcagccaggcagcactttattaccttggcgacaacaccga
gatcccaatggactgaggcggcagaagagggactgggtgatcccacctgtcaacgtgcca
gaaaactcaagggggccctttcctgagcaactggtcaggattcgatcagacaaggatcaa
gagaatctgatccggtacagcattactggagtgggagctgaccagccacctatggagatc
tttaatattgatcctataacaggccgtatgtatgtgaccagacctttggatagagaagag
agatcttcatatcatctcagagctcatgccgtggatatgaatgggaacaaggtggaaaat
cccattgacctttacatttacgtgattgatatgaatgacaacaggccggagtttgcaaac
caggtcttcaacggctctgtggacgagggctctaaaccaggtacctatgtgatgacagtt
acggcacatgatgccgatgatgtgaccacagtcaacggaattgtcatgtatcggattctg
acccaaagtccacagagcccatcccaagacatgtttgtaatccacagtgagacgggagcc
attagcactgtagctgctggactagatagagagaaagttcagcagtatactgtcatcata
caagccacagatacagaaggcaatctcaaccacggtctctcaaacacagcaactgcaatc
attacggtgacagacgtgaatgacaacccaccagaattcactagcagcatctactatggc
gaagtgccagaaaacagcatggacactgtggtggctaatttgaccgtggtggatcgagac
cagccacactcacccaattggaatgcaatgtataagatcatcagtggggatgcgtccagc
cattttgccattagaacggatcccgtaaccaatgaaggcttgctcaccgtggtaaagcca
gtagactacgagatgaacaaggcctttatgctgacagtcatggtgacgaaccaagctccc
cttgccagtggtattcagatgtccttactgtcaacggctggcattaccatctccgtcatg
gatgtcaatgaagccccatatttcccgaatagaaatgaccccatcaagcactatgaagga
gagccggtgggcaaagtcctaacgacattttctgccgtggatccagaccgctacatgcag
caggctctgagatactccaagctatcagatcctgcaaagtggttgaacattaatgccaca
aatggtcagatcactaccacagctgtcctcgatcgagagtcagcctacattaaggatgac
atctatgaggccacgttcctggcaactgacaatggtgtgcctccagccagcggcactggc
acgctgcagatctatttaattgacataaatgataatgctcccaagctcttgccaaaagag
gcgcagatttgtgacaaacccaattcaaatgccatcaacatcactgccgcagatgctgac
agaaagccaaatggtggaccttttgtctttgagctaccctcagaagtcaggagaaattgg
accataagtcgactgaatggtaactttgcccggctgagcttgcaaatagggcacctggaa
gctggggtctatgatgtcccagtcattgtgacagattctggtaatcctccattgtacaac
acatctatcattaaagtaaaagtgtgtccatgtgacaacgatggagactgcactaccatt
ggagccgtgactgccgctggactgggcacgggcgctatcatagccatcttgatatgcatc
attatactgttaactatggttttattgtttgtggtatggatgaagcgcagagaaaaggaa
cgacacacgaagcagctcctgattgaccccgaagacgacgtgagggataatatccttaaa
tacgatgaggaaggaggcggtgaagaagaccaggattacgatttgagccaactccagcaa
cccgagtctatggatcacgtactgaacaaagctgcaggcgttcgacgggttgatgagaga
cccataggtgctgaaccacagtaccctgtaaggccagtagtccctcaccctggggacatt
ggtgactttattaatgagggtctacgggcggcagataacgaccccacagctccaccttac
gattccctcctggtgttcgactatgaaggaagcggctccacagcgggctcagtcagctcc
ctgaattcatccagctctggggaccaagactatgactatcttaatgactgggggccacgc
ttcaagaagctggcagacatgtacgggggaggggaagaagattaa
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