Geotrypetes seraphini (Gaboon caecilian): 117369205
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Entry
117369205 CDS
T09159
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsh03041
]
117369205 (RBM39)
Spliceosome [BR:
gsh03041
]
Common components
Common spliceosomal components
General mRNP proteins
117369205 (RBM39)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
PRP38_assoc
RBD_DEAH11
RRM_7
Motif
Other DBs
NCBI-GeneID:
117369205
NCBI-ProteinID:
XP_033819280
UniProt:
A0A6P8SJW5
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Position
11:complement(137861423..137999355)
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AA seq
555 aa
AA seq
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MEVSERMADDIDIEAMLEAPYRKDENKLSSANGHEERSKKRKKSRSRSRSHERKRSRSKE
RKRSRDRERKKSRSRERKRSRSKERRRSRSRSRDRRFRGHYRNPYPGPKFNSSMRGKMGI
PHGIKLRRRSRSRSPFKRDRSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFST
VGKVRDVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRA
AAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGF
ITFSDSECAKKALEQLNGFELAGRPMKVGHVTERIDASSASSFLDSDELERTGIDLGTTG
RLQLMARLAEGTGLQIPPAAQQALQMSGSLAFGAVADLQSRLTQQSEVLAAAAAAAAAAS
ASAAAAAAVTATVTAASSSAASSQPLATQCFQLSNMFNPQTEEEPGWDTEIKDDVIEECN
KHGGVIHIYVDKSSTQGNVYVKCPSVAAAIAAVNALHGRWFAGKMITAAYVPLPTYHSLF
PDSMTATELLVPVRR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgtctgaaagaatggctgatgatatagatattgaagcaatgctcgaggctcct
tacaggaaggatgagaacaagttgagcagtgctaatggccatgaagaacgcagtaagaag
aggaaaaaaagcagaagtagaagtcgaagtcatgaaagaaagaggagccgaagcaaggaa
cgtaaacgcagtagagatcgagagaggaagaagagcagaagtcgtgaaaggaaacgtagc
cgtagtaaagaacgaagacgtagccgttcaaggagcagagatagacggttcagaggccat
tacagaaatccctaccctggaccaaaatttaacagctctatgagaggaaagatgggaata
ccacacggcatcaaattgagacgacgttccagaagcaggagcccttttaagagagacaga
agcccagtgagagaaccgattgataatctaacccctgaagaaagggatgctagaacagtg
ttctgtatgcagcttgctgcaagaattcgtccaagagatctcgaagaatttttctctact
gtaggcaaggttcgagatgtgagaatgatttctgatagaaattccagacgttctaaggga
attgcttatgtagagtttgtggatgttagttcagtgcccctagcaatagggttaactgga
cagagagtcttgggtgttccaatcatagtacaagcttctcaggcagagaaaaacagagca
gcagcaatggctaataacttgcagaaaggaagtgctgggcctatgcgactctatgtggga
tcattgcacttcaatataacagaagatatgcttcgtggaatctttgaaccatttggaagg
attgaaagcattcaactgatgatggacagtgaaactggccgttccaaaggatatggattc
attacattttcagattcagagtgtgccaaaaaagcactggaacagttaaatggatttgag
ctagctggcaggccaatgaaggtgggccacgtgacggagcgcattgatgcttctagtgcc
agttcatttttggacagtgatgaactagaaaggactggaattgatttaggaaccactggg
cgcctgcaactgatggcaaggcttgcagaagggactggattgcagattccacctgcagca
cagcaagctctgcaaatgagtggatctttagcatttggtgctgtggcagatttacagtcg
agactcacccagcagagtgaagtcctggctgcagctgctgctgctgctgccgccgcttct
gcctctgctgctgccgccgccgctgtcactgccactgtaactgcagcatcttcatctgca
gcatcttcacaacctcttgcaacccagtgcttccaactctctaacatgtttaatcctcaa
acagaagaagagcctggctgggatactgaaattaaggatgatgtgattgaggaatgcaac
aagcacggaggtgttattcacatttatgtagacaaaagttcgacccagggcaacgtgtat
gtgaaatgcccttcggttgctgcagcaattgcagcagtaaatgcattgcatggaagatgg
tttgcaggtaaaatgattacagcggcgtatgtacctcttccaacctatcacagtcttttt
ccagattccatgacagcaactgaactactggttcctgttcgtcgataa
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