KEGG   Geotrypetes seraphini (Gaboon caecilian): 117369224
Entry
117369224         CDS       T09159                                 
Symbol
XRCC1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
gsh  Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:gsh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    117369224 (XRCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:gsh03400]
    117369224 (XRCC1)
DNA repair and recombination proteins [BR:gsh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     117369224 (XRCC1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 117369224
NCBI-ProteinID: XP_033819335
UniProt: A0A6P8SZ88
LinkDB
Position
11:72593657..72769967
AA seq 661 aa
MPDIKVKHVVSCSSEDSTHKAENLLKADTYRKWKSSKAGEKQVSVILQGFLSVLCLQFEK
EELIHGIDVGNECSAFVEVLVGHSTSVSEQEYEVILVTSSFMSPVESKNNSNSNRVRMFG
PEKLVKGTAEKKWDRVKIVCTQPYNKNLSYGLSFIRFHSPPDPGESQSAASSASTPRVTK
LGQFVVKEESTSSGMKPGSLFFSRAAKSPVLSPKASQNDQPAPSYAAATLRASSAGESGL
LTGTPEKPSAKTPSPKESTLVKRKFDFSKETQVGSAAKKSISKEQAKASPRSKESLTEQL
PVKKLKATPPSGTSVRDPAAIVAGKVPAKKQQKKPAEAVELHRILQGTIFVLSGFQNPIR
TQLRDKALEMGAKYRPDWTPDCTYLICAFPNTPKYGQVKAMGGTIVKKDWILDCHKRKQR
LSHKHYLMDGPQSSSDEEDNEEENAPSQKQNVNVASFSHETEEADLINEKPPRTPDLVSD
EEMPGMSMSHHEEDYSGSTDEDVPEQHDSKEEDSGGDTEDELRRIVDAGQKKQTSLLKTI
ADNPYGGSTDENTDIEEEEADFPIPELPDFFLGKHFLLYGDFPPAERRMLSRYIIAFNGE
LEEYMNEKVNFVVTIQDWDDTFEEALVENANLSFVKPRWIYTCNERQKMIPHQPFVVVPQ
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgccagatattaaagtaaagcatgttgtgtcctgcagcagtgaggactcgactcataag
gcagagaatctactgaaagctgatacatacaggaaatggaagtctagcaaggctggagag
aaacaagtttcagttatcttacagggctttctttctgtactttgcttgcagtttgaaaag
gaagagctgatccacggcattgatgttgggaatgagtgttctgcttttgtggaggtgctt
gtgggacattccacttctgtcagtgagcaggaatatgaggtgatcttggtcacctcctcc
ttcatgtccccagtagagagcaagaacaacagcaactcaaatcgcgttcggatgtttggg
ccagagaaactagtgaaagggacagcagagaagaaatgggaccgggtgaagattgtgtgc
acgcagccttacaacaagaatctgtcatatggactgtcctttatacggttccattctcct
cctgatcctggagagtcccaatctgctgcttcctcagcctctacaccaagagtcaccaaa
ctaggacaatttgtggtgaaggaagagagcacttcaagcggaatgaagcccggcagtctt
ttctttagtcgagctgctaaatctccagtcctttctcccaaagcctcacagaatgatcaa
ccagctccaagttatgcagcagccacacttcgagccagcagtgctggagagtctggttta
ttaacagggacgccagagaagccctctgccaaaactccctcaccaaaggaatccaccctg
gtgaagagaaaatttgactttagtaaagagactcaagtgggatctgcagcaaagaaatcc
atatccaaagagcaggccaaagcgtcaccacgctcaaaagagagccttacagaacagctg
cccgtgaaaaagctgaaagcaactccaccatctggcacttctgtgagagaccctgcagcc
attgtggcaggaaaggtaccagcaaaaaagcagcagaagaagccggctgaggcagtggaa
ctacaccgaattttgcagggaaccatctttgtgcttagtggatttcagaaccccatccgg
acacagttacgggacaaagccttggagatgggcgccaaatatcggcctgactggacccct
gactgcacatatctcatatgcgcttttcctaacacccctaagtacggccaagtgaaagct
atgggtggaactattgtgaagaaggactggatcctggactgccacaagaggaagcagcga
ctctcccataagcactatttgatggatggcccccagtccagtagcgatgaagaggacaac
gaagaggaaaatgccccatcccagaaacagaatgtaaatgtagctagtttcagccatgaa
actgaggaagctgatctcataaatgagaaaccgccccgaactcctgatctggtatctgat
gaagagatgcctggaatgtccatgtcacaccatgaagaagattacagtggctccactgat
gaagatgtcccagagcagcatgacagcaaagaggaagactctggcggagacacggaggat
gagctgaggaggattgtagacgctggtcaaaagaagcaaacatcgttattgaaaaccata
gcagacaatccttatggtggttccacagatgagaacacagacattgaggaagaagaagca
gactttcctatcccagaactgccagatttcttcctgggaaaacatttccttttgtatggg
gactttccacctgcagagcgaaggatgctgtctagatatatcattgcattcaacggggag
cttgaggagtacatgaatgaaaaagtgaactttgtcgtcacaatacaggactgggatgat
acctttgaggaggccctggttgagaatgccaacctgtcctttgtgaaaccacgctggatc
tacacctgtaatgaacggcagaaaatgatcccacaccagccctttgtggtggtgccacaa
acatga

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