Geotrypetes seraphini (Gaboon caecilian): 117369263
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Entry
117369263 CDS
T09159
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh04120
Ubiquitin mediated proteolysis
gsh04137
Mitophagy - animal
gsh04144
Endocytosis
gsh04340
Hedgehog signaling pathway
gsh04350
TGF-beta signaling pathway
gsh04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117369263 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117369263 (SMURF1)
04350 TGF-beta signaling pathway
117369263 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117369263 (SMURF1)
04137 Mitophagy - animal
117369263 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
117369263 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gsh04131
]
117369263 (SMURF1)
04121 Ubiquitin system [BR:
gsh04121
]
117369263 (SMURF1)
03029 Mitochondrial biogenesis [BR:
gsh03029
]
117369263 (SMURF1)
Enzymes [BR:
gsh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117369263 (SMURF1)
Membrane trafficking [BR:
gsh04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
117369263 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
117369263 (SMURF1)
Ubiquitin system [BR:
gsh04121
]
Ubiquitin ligases (E3)
HECT type E3
117369263 (SMURF1)
Mitochondrial biogenesis [BR:
gsh03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117369263 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
117369263
NCBI-ProteinID:
XP_033819457
UniProt:
A0A6P8SLQ4
LinkDB
All DBs
Position
11:11809532..11940973
Genome browser
AA seq
731 aa
AA seq
DB search
MSNPGGRRNGSSIKIRLTVLCAKSLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISIWNHKKIHKKQGAGFLGCVRLLSNAVSRLKDTGYQRLDLCK
LNPTDSDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGPVYEDSGPGRPLSCFMEEPA
PYTDGTGAAGGGNCRFLESPSQEQRLQAHRLRNPEVRGHIQTPQNRPYGHQSPDLPEGYE
QRTTVQGQIYFLHTQTGVSTWHDPRIPRDLNSVNCDDLGPLPPGWEVRSTVSGRIYFVDH
NNRTTQFTDPRLHHIMNHQFQLKEPSQSLPVQNESSLEGSEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTIPFYKQLLGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVSVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKANTRLKHCLADSSIVKWFWQAVESFDEERRARLLQFVTGSTR
VPLQGFKALQGSTGTAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLT
AVEETCGFAVE
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatcccggcggtcggaggaacggctccagcatcaagattcgcctgacagtgtta
tgtgccaagagccttgcaaaaaaagatttctttagattacctgatccatttgcaaaaata
gtagtggatgggtctggtcaatgtcattcaactgacaccgtgaaaaatacattagaccca
aagtggaatcaacattatgacctgtatgttggcaaaacagattctatcaccattagtata
tggaaccataagaagatacacaaaaaacagggggctggcttcctggggtgtgtgcgactc
ctctccaatgctgtcagtaggctgaaagacactggataccaacgtttggatctatgcaaa
ttaaaccccacagatagtgatgctgtgcgaggccaaatagtagtcagtttacagacgcgg
gaccgaatagggacaggaggttctgttgtcgattgcaggggactattagaaaatgaagga
ccagtatatgaagattctggacctgggaggccccttagctgctttatggaggaaccagca
ccatacacagatggtacaggagcagctggtggagggaactgtaggtttttggaatcacct
agccaagaacagagacttcaggcacacagacttcgaaatcctgaggtcagagggcatatt
cagacaccacagaacagaccatatggtcatcagtcacctgaccttccggaaggatatgaa
caaaggacaactgtacaaggccagatttactttttgcacacacagactggagttagcaca
tggcatgaccccagaataccaagagaccttaatagtgtgaactgtgatgacttgggacct
ttgccaccaggttgggaagtccgaagcacagtgtctgggagaatatattttgtagaccac
aataacagaacaacccagtttacagatccaagattacatcatataatgaatcatcaattc
cagctaaaggagccaagccagtctttaccagtgcagaatgagagttcattggaaggtagt
gaagaactgcctgcacagagatacgaaagagacttggtacagaagctcaaagtgctcaga
catgagctgtctttgcagcaaccgcaagcaggtcactgtcgcattgaagtatctcgagaa
gaaatctttgaggagtcataccgtcagataatgaagatgaggcccaaagacctaaaaaag
cgccttatggtgaaatttcgtggagaagaaggattagactatggtggagttgcaagggag
tggctatatttactgtgtcatgaaatgttgaatccatattatggactgttccagtattct
actgacaatatttacatgctgcaaatcaatccagattcttcaatcaacccagatcatctg
tcttatttccactttgttgggcggatcatgggtttggctgtattccatggacactatatt
aatggagggttcaccattcctttctacaagcagctcctgggaaaacccattcagctgtct
gatctagaatctgttgacccagaattgcacaagagcttggtttggatcttagagaatgat
attacaccagtgttggatcacactttttgtgtagagcacaatgcatttgggcgaatcctt
cagcatgagctcaagccaaatggaagaaatgtgtctgttacagaagagaacaagaaagaa
tatgtcagattgtatgtgaattggcgattcatgagaggaattgaggctcagttcctggct
cttcagaaaggctttaatgagcttattccacagcacctactaaagccttttgaccaaaag
gagcttgagctgattataggaggcttggataaaatcgatttgaatgactggaaggcaaac
acacggctaaagcactgcctggcagacagcagtattgtaaagtggttctggcaggcggtg
gagagttttgatgaagagagaagggcccgattgctgcagtttgtcactggttccacacgt
gtcccacttcagggtttcaaggctttacaaggttctacaggcactgcagggcccagactc
ttcaccatccacctgattgatgcaaatacagacaacctaccaaaagcccacacctgcttt
aaccggattgacattccgccttatgagtcttatgaaaagctttatgagaagctgttgaca
gctgtagaagagacatgtggatttgccgtggagtga
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