Geotrypetes seraphini (Gaboon caecilian): 117369318
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Entry
117369318 CDS
T09159
Symbol
TBL3
Name
(RefSeq) transducin beta-like protein 3 isoform X1
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
117369318 (TBL3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
gsh03009
]
117369318 (TBL3)
Ribosome biogenesis [BR:
gsh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
117369318 (TBL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
EIF3I
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_DCAF12
Beta-prop_IFT140_1st
WD40_RFWD3
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_VPS8
Beta-prop_SPT8
WD40_like
Cytochrom_D1
Beta-prop_pof12
DUF8167_2nd
Motif
Other DBs
NCBI-GeneID:
117369318
NCBI-ProteinID:
XP_033819632
UniProt:
A0A6P8SM64
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All DBs
Position
11:complement(4832147..4867301)
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AA seq
830 aa
AA seq
DB search
MATRCLLTVLFLYSVLQYPNRSVCLTEEAMQFPKKLNLSTKEEKFRTRLNILDVETGAVT
HSIEQDDQEEITSFALSPNDEILVTGSRALLLKQWDWRENKCSRTWKAIHTAPVASMTFD
PTSTLLATGGCDSTIKIWDVIRQYCTHNLKGSSGVVHIVEFHPDISRLQLFSSSMDYKIR
IWDLSSSRCLVALETHYSTVTSLSFTADGATMLSSGRDKVCTVWDLKTQKSKRTIPVYES
VEAAVVLPKSKTSRPPEVQRKGLYFITAGSKGILRIWDAGTAVCVYTQTLPYPLPKSPEE
DASEHSLMHCLLVPTRNEIAAVTVEHNILLYDLQTMQLRKQFAGYSEEVLDVKFLGPADS
YIVVATNSPQLKVFELATSSCQILHGHTETVLAVDVFRKGMKFASCAKDRSVRIWRMDTS
GQVTCVAVGSGHTHGVGTVACSRLKEAFIVSGSQDCTMKIWKLPKSLLSKDRGDVSSVPE
ALHAHLTEKGHDKDINGITVSPNDKLVATGSQDRTAKLWATEDCSLLGVFRGHKRGIWCV
QFSPMDQVLASSSADGTLKLWGLQDFSCLKTFEGHDASVLKVIFVSRGTQLLTSGSDGLL
KLWTIKTNECVKTLDVHEDKVWGLHSNRQDDTVVTGSSDSSIVLWKDVTETELADAQAKE
EELIEKKQELSNLLHKKKYVRALGLALFLDQPHTTLMVIKAILQETHGGEKLEETLSKLR
QDQKESLLKYSSTWNTNSRNCHEAQAIIGILLRHETPEMLLQYGGIKTAVETLIPYTERH
LQRMGRLLQASMFLDFMWQNMKLSDASSSWDGQKLPEPITASLQLEMETD
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgcgctgcttattaactgtcttatttctttattccgttctacagtatcctaac
agatctgtgtgtctcactgaggaagctatgcagtttccaaaaaaattgaacctttctaca
aaggaggaaaaattcagaacaaggctgaacattttagacgttgaaacgggagcagtgacc
cacagcattgagcaggatgaccaggaagagataacgtcatttgcgctcagtcccaatgat
gagatcctggtcactgggagccgggccctgctgctcaaacagtgggactggagggaaaat
aaatgttcccggacctggaaggccatccacacagcacctgtggccagcatgacctttgac
ccaacctccactttgttagcgacaggtggctgtgacagtaccattaagatctgggatgta
atcagacaatactgcacccacaatctgaagggctcctctggggttgtccatattgtggaa
ttccatcctgacatttcccggttacaactcttctcctcttccatggactacaaaatccgg
atctgggatctgagttccagccgctgtctggttgcactggagactcattatagtacggtc
acatccctgtccttcacggcggatggtgccacaatgctcagttcgggtcgtgataaagtc
tgcacagtctgggatctgaagacacagaaatccaaaagaaccattccggtgtatgagagt
gtggaagcagctgtggtgttaccaaagtccaaaacgtcccgtcccccagaagtccagaga
aagggtttatacttcatcacagccggaagcaaagggatcctgagaatctgggatgctggg
acagctgtctgtgtgtacacccagactcttccttaccctcttccaaagagcccagaggag
gatgccagcgagcatagtctgatgcactgccttctggtgcccactcgcaacgagatcgcg
gctgtgacggtggaacataatattctcctgtatgacctgcaaacgatgcagctgaggaaa
cagtttgctggttacagtgaggaggttttggatgtgaagttcctgggccctgcagactct
tatatcgtggtggctacaaacagtccccagctgaaggtctttgagctggcgacgtccagt
tgccagatcctgcatggtcacacagaaaccgtgcttgctgtcgatgtgttcagaaaagga
atgaaatttgcaagttgtgctaaggacagaagtgtcagaatttggcggatggatacctct
ggtcaggtgacctgtgtggcagtgggatctggtcatacacacggtgtgggcacagtagcg
tgttccaggttgaaagaagcctttatagtcagcggcagccaggactgcaccatgaagatc
tggaagctgccaaagtcccttttatccaaggacagaggagacgtgagctcggtgcccgaa
gcgttacacgcccacttgactgagaagggccatgacaaggacataaacggcatcacagtg
tcccccaacgataaactggttgctactggctcacaggacaggacagcaaagctgtgggct
acggaggactgttcactgctgggtgtcttccgggggcacaaacgcggcatctggtgtgtg
cagttctcccccatggatcaggttttggcatcgtcgtccgcagatgggacactgaagctt
tgggggctgcaggacttcagctgtctgaagacctttgagggtcacgatgcctcggtgctg
aaggttatatttgtgagccgagggactcagcttctcacaagcggatctgatggtctctta
aagctttggaccattaaaaccaatgagtgtgtgaaaaccttagatgttcacgaggataaa
gtctggggcctacacagcaacagacaagatgacacagtagtgaccggctccagcgattcc
agcatcgtcttatggaaggatgtcacggaaactgaactggcggacgcgcaggcgaaggaa
gaggagctgattgaaaagaagcaagaactctccaatctgctgcacaagaagaagtatgtc
cgtgctttgggcctggctttgttcctggaccagcctcatacaacgctgatggtgataaaa
gctatactgcaagaaactcacgggggagagaagttagaggagaccttatcgaaactgcgc
caggatcagaaagagtctctgctgaaatattccagcacctggaacacaaactctcggaat
tgccacgaggctcaggccatcatcgggatccttctgaggcacgagacccccgagatgctt
ctgcagtatggtgggatcaagacagctgtggaaacactcatcccatataccgagcgtcac
ctgcagagaatggggcggctgttgcaggcctccatgtttctggacttcatgtggcagaat
atgaaactgagcgatgcctcctcttcctgggatggacagaagcttccggagccaatcacg
gcctccttacaactagaaatggaaactgactga
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integrated database retrieval system
