Geotrypetes seraphini (Gaboon caecilian): 117369356
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Entry
117369356 CDS
T09159
Symbol
HPSE
Name
(RefSeq) heparanase isoform X1
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
gsh
Geotrypetes seraphini (Gaboon caecilian)
Pathway
gsh00531
Glycosaminoglycan degradation
gsh01100
Metabolic pathways
Module
gsh_M00078
Heparan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
gsh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
117369356 (HPSE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
gsh00536
]
117369356 (HPSE)
Enzymes [BR:
gsh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
117369356 (HPSE)
Glycosaminoglycan binding proteins [BR:
gsh00536
]
Heparan sulfate / Heparin
Enzymes
117369356 (HPSE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
DUF7621
Motif
Other DBs
NCBI-GeneID:
117369356
NCBI-ProteinID:
XP_033819723
UniProt:
A0A6P8SUJ3
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Position
1:351373757..351450133
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AA seq
534 aa
AA seq
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MGEIALLVLLLNGLLMTGDTSNEDAVALKVKLQEARAQLNPQFLSLTIDASLASDPKYIT
FLGSAKLRTLARGLSPAYLRFGGTKTDFLLFDPNTEPSLEEKLYWKSWASSGLCEKRHLP
PVVEKNLQTRWPFQEQQILKEELQKKYKNTTISRSTVDLLYSFANCSGLSLIFGLNALLR
KENSQWDSSNAKLLLNYCASKQYNLSWELGNEPNSFRKKAGIYIEGSQLGQDFVQLHYLL
SNYSAFRSSGLYGPDVGQPRKETQKLLKSFLKAGGKVISSVTWHHYYVNGRTASEKDFLN
PKVLDGLILEIQNVFQIVNETVPHRKVWLGETSSAYGGGSPGLSNTYIDGFMWLDKLGVS
ATLGIDTVMRQTFFGTGAYNLVDANLEPLPDYWLSLIYKKLVGSKVLKATVSNTDGIDDR
KLRVYLHCTNSNYSKYSAGDITLFVLNLHNDTRNLQLPSSLSSKYVDEYMLRPAEKDSLL
SRTVQLNGRVLKMVDDETLPTITEKSLSPRSFLSLPAFSYGFFVIRDAKAAACI
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggggagattgccttgctcgtattacttctcaatgggctgctgatgacaggtgacact
tctaatgaggatgctgtggcattgaaagtcaaactccaggaagcaagagcccagctcaac
ccgcagttcctctctctaacaatcgatgccagcctagcttcagatcccaaatacattacc
ttcttaggctctgcaaaactgcgaactttagccagaggcttgtctcctgcctatctgaga
tttgggggcaccaaaacagacttcttgctttttgatccaaacacagagccctctttagaa
gagaaactatactggaaatcatgggccagttcaggtctgtgtgaaaagagacatcttccc
cctgttgtggagaagaacttgcagactcgctggccctttcaggagcagcaaatactcaaa
gaagaattgcagaaaaaatataaaaatactactatttcaagaagcacagtggacttgctg
tacagttttgcaaattgttctgggctgtctctgatttttggcctgaatgctttactccgg
aaggagaactcccagtgggacagttcaaatgctaaattactgttaaattattgtgcttca
aagcaatacaacttatcctgggagctaggcaatgagcctaacagttttaggaagaaagca
ggcatctacattgaaggtagccaacttggccaagactttgttcaacttcattaccttctg
agcaattacagtgcctttagatcctccggcctttatggtcctgatgttgggcaaccgcga
aaggaaactcaaaagcttctaaaaagtttccttaaagcaggaggaaaagtcatcagttcc
gtcacttggcaccattattatgttaatggaagaactgcttctgagaaggatttcctgaat
cccaaagtgttggatggtctgatactggagatacaaaacgtttttcagattgtgaatgaa
actgtgccccacaggaaggtctggctgggagaaactagctcggcctatggaggagggtcg
cctggactgtccaacacctacattgatggctttatgtggttggacaagcttggagtgtca
gccacactgggcattgacacagtgatgagacaaaccttctttggaactggagcttataac
ctagtggatgccaatctagaacccctacctgactattggctgtctctgatctacaagaaa
ctagttggttcgaaggtactgaaagctactgtttccaacacagatggtatagatgacagg
aaacttcgtgtctacctccactgtacaaacagcaactactcaaaatacagtgcaggagat
atcactttgtttgttttaaacttgcataatgacaccaggaatttgcagcttccctcttcc
ttatccagcaagtatgtggatgaatatatgctgcggcctgctgagaaggatagcttactc
tccagaactgttcagctgaatggtcgtgtcttgaagatggtggatgacgaaactttgcca
accataactgagaaatcattgagtccgaggagctttctcagtctcccagcgttttcttac
ggattttttgtgataagagatgccaaagctgcagcttgtatttaa
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