Gordonia sihwensis: P5P27_00605
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Entry
P5P27_00605 CDS
T08972
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P5P27_00605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_00605
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
P5P27_00605
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
P5P27_00605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
WFN93122
LinkDB
All DBs
Position
complement(124190..124957)
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AA seq
255 aa
AA seq
DB search
MRVGAHLRQDENPVATAEELGIDIFQMFVTDPQSWKKPEPHPHAEQIRESPIDVVVHSSY
QINVASLNNRLRMPSRKAVEQQAAAAADLGAIGLVVHGGHLKDGEDAADGFANWRKLFER
QADKGGFGVPILIENTAGGDHAMARTLESIERLWDAVGDFPEAGFCLDTCHAWAGGEDLV
GLVERIKSITGRIDLIHLNNSRDEFDSGRDRHANLESGQIDAEVLAELMKTAGAPGVLET
PADGIPDDLAYLRSL
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtcggagcccatcttcgccaggacgagaaccccgtcgccaccgccgaggaactc
gggatcgacatcttccagatgttcgtcaccgatccgcagagctggaagaagcccgagccg
catccgcacgccgagcagatccgcgagtcgccgatcgacgtggtcgtgcactcgagctat
cagatcaacgtggcgagcctgaacaaccgcctgcggatgccgtcacgcaaggctgtggag
cagcaggccgcggcggccgccgacctcggcgcgatcggcctcgtggtgcacgggggccat
ctgaaggacggggaggacgcggccgacggattcgccaactggcgcaagctgttcgaacga
caggcggacaagggcggcttcggggtgccgatcctgatcgagaacaccgcgggcggcgat
cacgcgatggcccggacactggagtcgatcgagcgcctgtgggacgccgtcggagacttc
cccgaggccgggttctgcctcgacacctgccatgcctgggccggcggtgaagacctcgtc
ggcctcgtggaacggatcaagtcgatcaccggccggatcgatctgatccatctgaacaac
tcgcgtgacgagttcgactcgggccgcgaccggcacgccaacctcgagtccggccagatc
gatgcggaggtgctcgccgagttgatgaagaccgccggtgcacccggtgtgctggagacg
cccgccgacggcattcccgacgatctggcgtatctgcgatcgctctga
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