Gordonia sihwensis: P5P27_02245
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Entry
P5P27_02245 CDS
T08972
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
gsi
Gordonia sihwensis
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gsi03000
]
P5P27_02245
Transcription factors [BR:
gsi03000
]
Prokaryotic type
Helix-turn-helix
Other families
P5P27_02245
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_8
AAA_lid_14
HTH_50
HTH_30
RWP-RK
HTH_23
HTH_29
HTH_28
AAA_22
HTH_22
HTH_1
HTH_psq
Motif
Other DBs
NCBI-ProteinID:
WFN93415
LinkDB
All DBs
Position
complement(456732..458336)
Genome browser
AA seq
534 aa
AA seq
DB search
MTTPLPQRDVIAASWRRVTQSGLSPDSPFRPAVRDIADDRLLDAARPVLARAASMLSGTT
TALLLVDQDCRMVSRVSADSTLERHLESVGAVEGAACDESRMGTTALGTTVEVRGDVVIN
GSEHYLEQFRSLSCFGRPIVHPATRRVAGAICMTEVAPQINPLSVPLVRGLVDDIAERLL
NRTHADHRAVIAAFEKTSSRRDVAVAAVGDDLQLTNALAAQLLGSADFGSLRAMLHDRSE
RRRTITLVSGIEADIEIDRVDGVRHAAVFRLRPRVGHRTPADPVPRAAAASVAICGEPGT
GRTTEAQSLIPDDRRVRLDVAAALLDGTPPDVAAAIREARSAGHGLVVDGADLLDDRSIR
LLQAAIAAHRPDLPPIVVVCEPVTGGAAGLAALVGCCRTRVTLPPLRQRTSEIVSLAQRM
LERCDRRLELGPDAADALACQEWPGNLTEMSVVLGAAAETTLARGGRQLTAADLPEGYRG
SSRASRLMGLEQAERQAIIDALDAADGNKSHAAKALGVSRTTLYARIRALGISR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaccccacttccccagcgtgacgtgatcgccgcgtcctggcgtcgcgtcacccag
tccggcctgtcccccgactcgccgttccggccggccgtccgcgacatcgccgacgaccgg
ttgctcgacgccgcgcggccggtgctcgcgcgggccgcatcgatgctcagcggcaccacc
acggcgctgttgctggtggatcaggactgccgcatggtctcgcgcgtctcggccgacagc
acactggagcggcatctggagtcggtgggcgccgtcgagggcgccgcctgcgacgagtct
cggatgggcaccaccgcgctgggcaccaccgtcgaggtgcgcggcgacgtggtcatcaac
ggatccgagcactacctggagcagttccggtcgctgagttgcttcggccggccgatcgta
cacccggccacccgccgcgtcgcaggcgcgatctgcatgaccgaggtggccccgcagatc
aacccgctgtcggtgccgttggtgcgcgggctcgtcgacgacatcgccgaacggctcctg
aaccgcacgcacgccgaccatcgtgcggtgatcgccgcgttcgagaagacctcgtcgcgc
cgcgatgtcgcggtcgccgcggtcggcgacgacctgcagctcaccaacgccctggccgcc
cagttgctcggctccgccgacttcgggtcgctccgcgcgatgctccacgaccgctccgag
cggcgccggaccatcaccctggtgtccggcatcgaggccgacatcgagatcgaccgagtc
gacggcgtacggcacgccgccgtattccgcctgcgtccccgcgtcgggcatcggacaccc
gccgatccggtgccgcgcgccgccgcggcgtcggtcgcgatctgcggcgagcccggcacg
ggccggaccaccgaggcgcagtcgttgatccccgacgatcgccgggtgcgactcgacgtc
gccgcggccctgctcgacggcacgccgccggatgtcgcggcggcgatccgggaagcccgt
tccgcgggccacggtctcgtcgtcgacggcgccgatctcctcgacgatcgctcgatccgc
ctgctgcaggcggcgatagccgcccatcggcccgatctcccgccgatcgtcgtcgtctgc
gagccggtcaccggcggcgccgcgggcctcgccgcgctcgtgggctgctgccgcacccgc
gtcaccctgccgccgctgcggcagcgcaccagcgagatcgtctccctggcccagcggatg
ctggagcgctgcgaccgccgtctggaactcggtccggacgccgcagacgcgctggcctgc
caggagtggccgggcaacctgaccgagatgtcggtggtgctcggtgccgcggccgagacg
accctggcgcgcggcggcaggcaactcaccgccgccgacctcccggagggctaccgcggc
agttcccgcgcctcccgtctgatgggtctggagcaggccgaacgccaggccatcatcgat
gcgctcgacgccgcagacggcaacaaatcgcatgccgccaaggcgctcggcgtctcccgc
accaccctgtacgcccggatccgggcgctgggtatctcccgctga
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