Gordonia sihwensis: P5P27_02565
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Entry
P5P27_02565 CDS
T08972
Name
(GenBank) phage tail tape measure protein
Organism
gsi
Gordonia sihwensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PhageMin_Tail
Motif
Other DBs
NCBI-ProteinID:
WFN93477
LinkDB
All DBs
Position
505237..510615
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AA seq
1792 aa
AA seq
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MTAGGRIDIDVVLNDKDVAARLDSTLTKATASAKKAAGALGLAFGGAAVLGGLKSVIDAG
VEFDTVLNQLRGVTGATGAEMAAVSEKARQLGNDIAIPATSASDAAQAMLELSKGGLSVQ
QAMDAARGSLQLAAAAQISAAQASEIQAQAINTFSLKASDAGHVADVLAGTANAAAGEIT
DIAQGLQQAGSVASQFGMTIDETAGALGVLANNGIKGSDAGTLLKSTLLALQDTGKPAAT
AMEELGISVYDAQGKFRGLGPIMDELKTASTNLTEEQYNQATATLFGSDAMRLAGIAAKD
GSKSFREMTEQVGKAGSAQRLAEEMAKGLPGQLERLQNAADETKLALYDLLRGPLTDLAS
FGADQLGNLSDLLKGDTGGMSEGLRPLVEDLKSIGDGLHGIAQDLVGPGGALTVIGEGAQ
ATGKLAVAGLEPITGAVGGVLNVFAGLPAPVQTAALAMGAFAIARNKIATPGPLKALTAF
RAEMSAQNSLAKLATREVDKYGRAIEGTGRGLTVAQRAQAAYRTSTLESVSAMRGFTDQV
GAVRRGAAAAGEPVGLLTATMRTMGERNGALGQIGGAFTAASQGMGRFGSVAGTAAAGAK
ALRLGAGGLASALGGPWGIALGAASLGLAMYSQRQQEAAQAAAEHKRNVDDLVGSIDVQT
GALNKASTAQMAADLRGGKYGKGNTFEYSDQLGISADRVTAAASRQKGALDDLNVTLDAT
TKKSLESSDYWNKQGSSLRAAGIDADTMTDALRGNASAIKKVEGFMVGSGTTIQDYRRHL
NESGQNAVQLGENVNLAAQAVREAGAAQDQQTRAMEKMDPRARTLAEAMEVLGSKTSTAA
EKSNALKAALDALGGGAEGFDAAMGQAKQAVEKLPATWQAAADSVGGYGELINSATGRIV
LNNDATRALSSEIFNVKNQMNNAATAAYQFAIQNGQGSEAAADAARTAASEIYNSFMKSS
DGAKAAGVDVAALATAMGLLPPEQVVQLLAKGGDAVSAELLLIKRLVEGVPPNKAIELHS
ISDEAKAKLEGIKGLVVTELPDNKGVTVTATTTQAQQDLNALVTKQNELKDKNVTYRATV
IVDEAQAQSARWGVETFGVGSQPRAKGGPIDGYAVGGGVGADGAIRGPGTGTSDSILTQV
PAGGHVVTAAEVSAAGGHGAVNRQVSALGAGRPGRKTATAGPLMPVALSNGEHYLAPDTV
DAAGGHDAIFAWRAGLAQERQGLYLGGLVRAEQVGKANDGLPYITGARDCSMWVSWIVQA
AKGQELTRLFTTYSLLDGQTGGLEPGASPSDYLTVGVSQEHMAATVRTDHGPVNTESGGN
SSPSQVRWGRGAAGAFDGQFPFRFHLPKNLISPPPDETKPDVSAEEAATETMKAEDETQS
RQYIEPPKAPKAEDVAAEAARIGVRGLLETFDMQDSVFADPDKSTIGRALQIGINTQKYR
EQQAEVPKSESKSGGVSKEDQAAYDRDKLARDQKYENDRLAIKNSMKSGPERDRKLLDLK
QKHDQDNLEAKIKLRDKKSGTDSTSESDPSTAGKTSGPADTDPYRLVDSAPYDPSRGAVQ
WEKEATAALRIAGMNYRWKDKMIGQGDIESHGDPKAVGPDSPDGQPKGWMQVKPGTFSAF
RDPKLPDDPFNVLANGVAAAKYANKQYNGEPPWPTTKGYWAGGINAMDPSKAAVVAPQNR
RVIGDRAVADEFFIPDTDDPQHIALGAEWARRRGFQLVNMHADGGTLARARGGQAAVMDR
PAGPVIQEGDRHYNYSGPADQALAFFRGARQHDNIVRRGAGVQRIGRKGTRP
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgacggcaggcggccggatcgacatcgacgtcgtcctcaacgacaaggacgtcgcagcg
cgactcgactcgaccctgaccaaggccaccgcctcggcgaagaaggcagccggcgcactc
ggacttgcgttcggcggcgcagctgtcctcggcggactcaagtccgtcatcgacgccggc
gtggagttcgacacggtcctcaaccagctgcgcggcgtgaccggggcgactggggccgag
atggcggcggtgtcggagaaggcacgtcagctcggcaacgacatcgcgatccccgcgacg
tcggcatccgatgccgcgcaggcgatgctggagctgagcaagggcggactgtcggtccag
caggcgatggacgccgcacggggcagtctccagctcgccgccgccgcgcagatctccgcc
gcgcaggcctcggagattcaggcgcaggcgatcaacacattctcgctcaaggcctccgac
gcagggcacgtcgcggacgtcctcgcgggcaccgcgaacgccgcggcgggcgaaatcacc
gacatcgcacagggactgcagcaggcaggctcggtcgcctcccagttcggcatgacgatc
gacgaaacggccggtgcgctcggcgtcctggcgaacaacggcatcaagggctctgacgcg
ggcacgctgctcaagagcacactgctcgcgctccaggacaccggcaagcccgcggcgacg
gcgatggaagagcttggcatcagcgtctacgacgcgcaggggaagttccgcggcctcggc
ccgatcatggacgagctcaagactgcgtcgacgaacctcaccgaggagcagtacaaccag
gcgaccgcgacactgttcgggtcggatgcgatgcggcttgccgggatcgcggccaaggac
ggttcgaagagcttccgggagatgaccgagcaggtcggtaaggcggggtccgcacagcgt
cttgcggaggagatggccaagggcttgcccggtcagctcgagcggctgcagaacgcggcc
gacgagaccaagctcgcactgtacgacctgctgcgcgggccgctgacggatctggcgagc
ttcggtgccgatcagctcggcaacctctccgacctgctcaagggtgacaccggcgggatg
agcgagggcctgcggccgctggtagaggatctgaagtcgattggcgacggactccacggg
atcgcgcaggatctcgtgggcccgggcggcgcgctgacggtgatcggggaaggcgcgcag
gcgacgggcaagctcgccgtcgccggactggaaccgatcaccggcgcggtcggcggcgtc
ctcaacgtattcgcgggcctaccggcacccgtccagaccgctgccctggcgatgggcgcg
ttcgcaatcgcccgcaacaagatcgccacacccgggccgctgaaagcactgacggcgttc
cgcgcggagatgtccgcgcagaactcgctggcgaaactggcgacccgcgaggtcgacaag
tacggtcgcgcgatcgaaggcaccgggcggggcctgacggtagcgcagcgtgcgcaggcc
gcgtaccggacctcgactctcgagtcggtgtcggcgatgcggggattcaccgaccaggtg
ggcgcagtgcgacgcggtgcagccgcagcgggcgagccggtggggctcctgacggcgacg
atgcgcacgatgggggagcgtaacggcgctctcggccagatcggcggagcgttcacggcg
gcatcgcagggcatgggccgattcggctcggtcgcgggcaccgcggccgcgggcgcgaag
gcgctcaggctcggtgccggagggttggcgtcggccctcggtggcccgtggggcatcgcg
ctgggggcggcgtcgctcggtctggcgatgtactcgcagcggcagcaggaggccgcgcag
gccgccgccgagcacaagcggaacgtcgacgacctcgtcgggtccatcgacgtgcagacc
ggtgcgctgaacaaagcgagcacggcacagatggcggcggacctgcgcggcggaaagtac
ggcaagggcaacactttcgagtactccgatcagctggggatctcggccgatcgcgtcacg
gcggcggcatcgcggcagaagggcgcgctcgatgacctgaatgtcacgctcgatgcgacg
accaagaagtcgctggaatcgtcggactactggaacaagcagggctcgtcgcttcgcgca
gcgggtatcgacgccgacacgatgaccgacgctctgcgcggcaacgcctccgcgatcaag
aaggtcgaagggttcatggtcgggtcggggaccacgatccaggactaccggcgccacctc
aacgagtccggacagaatgccgtccagctgggggagaacgtcaacctcgcagcgcaggcg
gtccgcgaggccggggcggcgcaggaccagcagacgcgggcgatggagaagatggacccg
cgcgctcggacgctcgccgaggcgatggaggttctcgggtccaagacgtccacggccgcg
gagaagtcgaacgcgctcaaggctgctctggacgcgctcggcggcggcgccgagggtttc
gacgccgcgatggggcaggcgaagcaggccgtcgagaagctgccggcgacatggcaggca
gccgccgactcggtcggagggtacggggaactcatcaacagtgcgacgggacgcatcgtt
ctcaataacgacgcgacgcgggcactgtcgagcgagatcttcaacgtcaagaaccagatg
aacaacgccgcaacagcggcctaccagttcgccattcagaacgggcagggcagcgaggcc
gcggcagacgcagcgcgcacggcggcatccgagatctacaacagcttcatgaagtcgtcg
gacggggcgaaggctgctggcgtcgatgtcgcggcgctcgcgacggcaatggggttgctg
cctccggagcaggttgtgcagctgctcgcgaagggcggcgacgccgtctcggccgagctc
ttgctgatcaagagactggtcgagggcgtgccgccgaacaaggcgatcgaactgcactcg
atctcggacgaggcgaaggccaagctcgagggaatcaagggtctcgtcgtgaccgagctc
ccggacaacaagggagtgacggtcactgcgacgacgactcaggcacagcaggatctgaac
gctctggtcacaaagcagaacgagctgaaagacaagaacgtcacctaccgggcgacggtc
atcgtcgacgaagcgcaagctcagtccgccaggtggggcgtcgagacattcggcgtcggg
tctcagccacgcgcgaagggcgggccgatcgacgggtacgcggtcggtggtggtgtcgga
gccgatggcgcgatccgtggtccgggcaccgggacgtccgactcgatcctgacgcaggtc
ccggcgggcggtcacgtggtgaccgcggccgaggtatccgcggccggtggccacggtgcg
gtgaatcgtcaggtgtcggcactcggtgctggtcggccgggccgcaagacggcgacggcg
ggaccgctgatgccggtggcactgtcgaacggggagcactacctcgcgccggacacggtc
gatgccgccggcggccacgacgcgatcttcgcgtggcgcgccgggctggcgcaggagcgt
cagggcctgtacctcggtggactggtgcgcgccgagcaggtcggtaaggcgaacgacggg
ctgccgtacatcaccggtgcgcgggactgctcgatgtgggtgtcgtggatcgtgcaggcc
gcgaaggggcaggaactcacgcgcctgttcacgacgtacagcctgctggacggtcagact
ggtgggctcgagccgggcgcgtcaccgtccgactacctaactgtcggtgtgtcgcaggag
cacatggcagcgacggtgcggaccgatcacggcccggtgaacaccgagtcgggcgggaac
tcgtcgccgtctcaggtgcggtggggtcgcggcgccgccggcgcgttcgacggccagttc
ccgttccgcttccacctgccgaagaacttgatctcgccgccgccagacgagaccaagccg
gacgtgtcggccgaggaggccgcgaccgagacgatgaaggccgaggacgagacgcagtcg
cggcagtacatcgagccgccgaaggcaccgaaggccgaggacgtcgccgctgaggccgcg
cggatcggcgtccgcggactcctggagaccttcgacatgcaggactcggtattcgccgat
ccggacaagtcgacgatcggtcgggcgctgcagatcggcatcaacacgcagaagtaccgc
gagcagcaggccgaggtgccgaagtccgagtccaagagcggtggtgtcagcaaggaggac
caggctgcctacgaccgcgacaagctcgcgcgcgatcagaagtacgagaacgaccgcttg
gcgatcaagaactcgatgaagtcggggcccgaacgggaccgcaagctcctggacctcaag
cagaagcatgaccaggacaacctcgaggcgaagatcaagctccgcgacaagaagtctggc
accgacagcacgtcggagtcggacccgtcgacggcggggaagacgtccgggcctgccgat
accgacccgtaccggctcgtggactcggctccctatgacccgtcgcgcggcgcggtgcag
tgggagaaggaggcgacggcggcgctgcggatcgcgggcatgaactaccggtggaaggac
aagatgatcgggcagggcgacatcgagtcgcacggcgacccgaaggctgtcggcccggac
tcgccggacggtcagccgaagggctggatgcaggtgaagccggggacgttctcggcgttc
cgtgatccaaagctcccggacgatccgttcaatgtcctcgcgaacggtgtcgcggctgcc
aagtacgcgaacaagcagtacaacggtgagccgccgtggccgacgacgaagggctattgg
gctggcggcatcaacgcgatggacccgagcaaggccgctgtggtggcgccgcagaaccgc
cgggtcatcggcgaccgtgccgtcgccgacgagttcttcatcccggacaccgacgacccg
cagcacatcgcgctcggcgcggagtgggcgcggcggcgagggttccagctggtgaacatg
cacgccgatggcgggacgctcgcgcgggctcgtggcggtcaggcggcggtcatggatcgg
ccggccgggccggtaatccaggagggcgaccgccactacaactattccggaccggctgat
caggcgctggctttcttccgcggcgctcgtcagcacgacaacatcgtccgccgcggtgcg
ggagtgcagcggatcgggcggaaggggactcggccgtga
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