Gordonia sihwensis: P5P27_03000
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Entry
P5P27_03000 CDS
T08972
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03420
Nucleotide excision repair
gsi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
P5P27_03000
03430 Mismatch repair
P5P27_03000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_03000
Enzymes [BR:
gsi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
P5P27_03000
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
P5P27_03000
MMR (mismatch excision repair)
Other MMR factors
P5P27_03000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Terminase_6N
PcrA_UvrD_tudor
DEAD
Motif
Other DBs
NCBI-ProteinID:
WFN93551
LinkDB
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Position
595383..597890
Genome browser
AA seq
835 aa
AA seq
DB search
MNSSPAAIDETQLSDRGRELLDGLNPQQRDAVLHTGSPLLIVAGAGSGKTAVLTRRIAFL
LAERNVTPGQILAITFTNKAAAEMRERVIDLVGPRAAYMWVSTFHSTCVRILRAQSSLLG
DRNSNFSIYDADDSRRLLGMVVRDLDLDPKKFSPRGVGTLISNFKNELKDPDDAAAEAAA
DGQSDLAAGTVAQIYAEYQRRLAAANAFDFDDLIGETVSLLQRHPNVAEYYRRRFRHVLI
DEYQDTNHAQYVLVRELVGEQTTPSGLEPSELCVVGDADQSIYAFRGATIRNIEEFERDY
PDAETILLEQNYRSTQTILSAANAVISRNAGRREKKLWTDSGDGDLIVGYVADSDRDEAA
FIAKEIEELVDYSIGGSASHTYADVAVFYRTNTGSRSLEEVFVRHGIPYKVVGGTKFYER
KEVRDVIAYLRVVANPDDSVSLRRILNTPRRGIGDRAEACVAVHAENLGISFYQALVEAT
ENRVPLLNTRAVKQITLFVDLIEGLRSDFLMAFGAVGGESVDDAVADATTEGGDIGELVD
AIVDRSGYRAELEASNDPQDAARMDNLNELIAVARDFSMEAAQRADEPTDPDTDAAGEIV
GDGEPEPGSLAAFLEKVALVADADQVPDEGEGVVTLMTLHTAKGLEFPVVFVTGWEDGHF
PHMRALGDPAELSEERRLAYVGITRARQRLYLTRAMSRASWGQPVSNPESRFLQEVPQHL
IDWRRTEPKRGMREFGSRGGSFGFGSAGGGSSNGSESGFGSGLRGRSSYSSDPTRGRNKN
VHYEIGDRMNHPQYGMGKAVAKEGSGVTERITFDFGGKVGRVTLMTVGGLPGEKL
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttcacctgccgccatcgacgagacccagctgagcgaccggggacgcgaactc
ctcgacggactgaacccccagcagcgagatgcggtgctgcacaccgggtcgccgctgctg
atcgtcgcgggagcgggatcgggtaagacggccgtgctgacccggcgcatcgccttcctg
ctcgccgaacggaacgtgacgccgggacagatcctcgcgatcacgttcacgaacaaggcc
gcagccgagatgcgcgagcgggtgatcgacctggtcggaccgcgcgcggcctacatgtgg
gtctcgaccttccactccacctgcgttcggattctgcgggcgcagtcgagcctgctcggt
gatcgcaattcgaacttctccatctacgacgccgacgactcgcgcagactgctcggcatg
gtggtccgcgacctcgacctggatcccaagaagttcagcccgcgcggtgtgggcacgttg
atctccaacttcaagaacgaactgaaggatcccgacgacgccgcggcggaggcggcggcc
gacggccagagtgatctggcggcgggcaccgtcgcccagatctacgccgagtaccagcgt
cggctggcggcggcgaacgccttcgacttcgacgatctgatcggcgagacggtgtcgttg
ctgcagcggcaccccaatgtcgccgagtactaccggcgccgcttccggcacgtgctgatc
gacgagtaccaggacaccaaccacgcgcagtacgtgctggtgcgggagctcgtcggcgag
cagacgaccccgagcggcctggagccgtcggagctgtgcgtggtcggcgacgccgaccag
tcgatctacgccttccgcggcgcgacgatccgcaacatcgaggagttcgagcgcgactac
ccggacgccgagacgattctgctcgaacagaactatcgctccacccagaccatcctgtcg
gcggccaacgccgtcatctcacgcaacgcgggacgccgtgagaagaagctgtggaccgat
tcgggcgacggcgacctgatcgtcggttacgtcgccgactccgaccgcgacgaggccgcg
ttcatcgcgaaggagatagaggaactcgtcgattactcgatcgggggttcggcgagccac
acgtacgccgacgtcgcggtgttctatcgcaccaacaccgggtcgcggtcgctggaggag
gtcttcgtccgccacggaatcccctacaaggtggtcggcggcaccaagttctacgagcgc
aaggaagtgcgcgacgtgatcgcttacctgcgcgtggtggcgaaccccgacgactcggtc
agcctgcgccggatcctcaacacaccgcggcgcgggatcggcgatcgtgccgaggcgtgc
gtcgccgtccatgcggagaatctcggcatcagcttctaccaggcgctggtggaggcgacc
gagaaccgcgtcccattgctcaatacacgcgcggtcaagcagatcaccctgttcgtcgac
ctcatcgaaggactgcgcagcgacttcctgatggccttcggcgccgtcggcggcgaatcg
gtcgacgacgccgtcgccgacgcgaccacggagggcggcgacatcggcgaactggtcgac
gcgatcgtcgatcgcagtggctaccgtgccgagttggaggcgtccaacgacccgcaggac
gccgcacggatggacaacctcaacgaactgatcgccgtcgcccgagatttcagcatggaa
gccgcgcagcgggccgatgagccgaccgaccccgacacggacgcggccggcgagatcgtt
ggcgacggtgaacccgagcccggctcgctcgcggcgttcctggagaaggtggccctagtg
gccgatgccgaccaggtgcccgacgagggagagggcgtcgtcaccctgatgacgctgcac
accgccaaggggctggaattccctgtcgtcttcgtcaccggctgggaggacgggcacttc
ccgcatatgagggctctcggcgatccggccgaactcagcgaggagcgacggctggcgtat
gtcgggatcactcgagcccgccagcgtctctatctgacccgtgcgatgtcgcgcgcatcg
tggggacagccggtgtcgaatccggaatcgcggttcctgcaagaggttccgcagcacttg
atcgactggcggcgtaccgagccgaagcgtggcatgcgagagttcggctctcgcggcggc
agcttcggattcggttcagccggcggaggatcgtccaacggttccgagtcgggtttcggc
tcggggctgcgcggacggtcgtcgtactcgtccgacccgacccgtgggcggaacaagaac
gtccactacgagatcggcgaccggatgaaccatccgcagtacgggatggggaaggccgtg
gcgaaggaggggagcggtgtcaccgagcgcatcacgttcgacttcggcgggaaagtgggc
cgcgtgacgttgatgaccgtcggcggactgccgggggagaagctgtag
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