Gordonia sihwensis: P5P27_05140
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Entry
P5P27_05140 CDS
T08972
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P5P27_05140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_05140
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
P5P27_05140
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
P5P27_05140
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
WFN93942
LinkDB
All DBs
Position
1078194..1079036
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AA seq
280 aa
AA seq
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MTTPFSITTINVNGIRAAVKQRSDDNPGMLPWLEDAAPDVVLMQEVRAGDAIARKALQPA
LDAGWHFVHTESSVKGRAGVGILSRRAPSQVRVGFGSDEFDTAGRYIEADFDFGGETVTA
ASLYLPTGAAPTEQEKDIEKYEEKRRFLEAFRPYLDKLLGTGGLAVVAGDWNIAPDERDI
KNWKGNLKNAGFLPHERAWVAGLLEAGWADVAREHHGDVAGPYAWWSWRGKAFDNDAGWR
IDYHLATPALAARAQRTWVDRAGAYNLRWSDHAPVTAVFG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgaccacaccgttctccatcaccacgatcaacgtcaacgggatccgtgccgctgtgaag
cagcgctcggacgacaatccgggcatgctcccgtggctcgaggacgccgcacccgacgtg
gtgctgatgcaagaggtgagggcaggcgacgcgatcgctcgcaaggcgctgcagcccgcg
ctggatgccgggtggcacttcgtgcacacggaatcgtcggtcaagggccgcgccggcgtc
gggatcctgtctcgccgcgcaccctcgcaggtgcgggtcggtttcggcagcgacgagttc
gacacggcgggacgctatatcgaggcggacttcgacttcggcggtgagacggtgaccgcg
gcgagcctgtatctgccgacgggggcggcgccgaccgagcaggagaaagacatcgagaag
tacgaggagaagcgccgcttcctcgaagcgttccggccctacctcgacaaactgctcggc
accgggggactggcggtggtggcgggcgactggaacatcgcgcccgacgagcgcgacatc
aagaactggaagggcaatctcaagaacgcgggtttcctcccgcacgagcgggcatgggtc
gccggactgctggaggccggctgggcggacgtggcgcgcgagcatcacggcgacgtcgct
gggccgtacgcgtggtggtcgtggcggggcaaggcgttcgacaacgacgccggctggcgt
atcgactaccacctcgcgacgccggcattggctgcacgagcgcaacggacgtgggttgat
cgagccggcgcgtacaaccttcggtggtccgatcacgccccggtgaccgcggtgttcggc
tga
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