Gordonia sihwensis: P5P27_05800
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Entry
P5P27_05800 CDS
T08972
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi00300
Lysine biosynthesis
gsi00470
D-Amino acid metabolism
gsi01100
Metabolic pathways
gsi01110
Biosynthesis of secondary metabolites
gsi01120
Microbial metabolism in diverse environments
gsi01230
Biosynthesis of amino acids
Module
gsi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P5P27_05800 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
P5P27_05800 (lysA)
Enzymes [BR:
gsi01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
P5P27_05800 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WFN94067
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All DBs
Position
1228237..1229661
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AA seq
474 aa
AA seq
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MMAHPAGPRHAEILAAPHLAERPNRPEELSRIPENVYPRGTVRDEDGVVTIGGVRVDRLA
EQYGTPLFVYDEADFRSRCADMQRAFGPYGRVHYASKAFLSSQVAKWIESEGLSLDVCSG
GELAVALHAGFPAERIALHGNNKAEDELAAALDAGVGDIVLDSMIEIERLDRLAGERGVV
ADVLVRVTPGVEAHTHEFISTAHEDQKFGFALAGGVALDAVRAVFAADNLRLVGLHSHIG
SQIFEIDGFELAARRVIGLLADIVAEFGVEKTSQLKVLDLGGGLGISYLESDDPPPVSVL
AEALAEIVRRESAALNLPMPTIAVEPGRGIAGPAGVTLYRVGTVKDVALDGNTVRRYVSV
DGGMSDNIRTVLYDAEYDVRLASRVSDAKAVVCRVVGKHCESGDIVIRDCWLPDDLAPGD
LLVVGATGAYCYSMSSRYNMVPRAAVATVNDGRSRLMLRRETVEDFLSLEVDPE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgatggcacaccccgccggcccccgccacgccgagatcctcgccgctccgcatctcgcg
gagcgccccaaccgccccgaagagctctcccgtatcccggagaacgtctacccgcgcggg
accgtccgcgacgaggacggcgtcgtgacgatcggcggagtccgggtcgaccggctcgcc
gagcagtacggcaccccgctgttcgtgtacgacgaagcggacttccggtcgcgctgcgcc
gacatgcagcgggcgttcgggccgtacggccgcgtgcactacgcgtcgaaggcgtttctc
tcctcgcaggtcgcgaagtggatcgagtccgagggcctctcgctcgacgtctgctccgga
ggcgaactggcggtagcgctgcacgcgggattccccgccgagcgcatcgcgctgcacggc
aacaacaaggccgaggacgaactggcggcggcactcgacgccggtgtcggggacatcgtc
ctggactcgatgatcgagatcgagcgtctggaccgtctcgccggtgaacggggagtggtc
gccgacgtgctggtccgggtgactccgggcgtcgaggcgcacactcacgagttcatctcg
acggcgcacgaggaccagaagttcggtttcgcactcgccggcggtgtggcgctcgacgcg
gttcgcgcggtcttcgccgccgacaacctgcgtctggtggggctgcacagccacatcggc
tcgcagatcttcgagatcgacggattcgagctcgccgcacgccgggtgatcggcctgctc
gccgacatcgtcgccgagttcggggtcgagaagacctcgcagctcaaggtgctcgacctc
ggcggcggtctcggcatctcatacctggagagcgacgacccgccgccggtcagtgtgctg
gccgaggcgctggcggagatcgtccgccgcgagtcggccgcgctgaacctgccgatgccg
accatcgcggtcgaacccggtcgcgggatcgcggggccggcgggcgtgacgctgtaccgg
gtgggaaccgtcaaggacgtcgcactcgacgggaacaccgtgcgccggtacgtctcggtc
gacggcggcatgagcgacaacatccgcacggtgctctacgacgccgagtacgacgtccgg
ctcgcctcgcgggtctcggacgcgaaggccgtcgtctgccgggtggtgggcaagcactgt
gagagcggcgatatcgttatccgcgactgctggctgccggacgacctggccccgggcgat
ctgctcgtggtgggcgccaccggcgcctactgctattccatgtcgagccgctacaacatg
gtgccgcgtgcggcggtcgcgacagtcaatgacggccggtcccggctcatgctgaggcgg
gagacggtggaggacttcttgagcctggaggtggacccggaatga
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