Gordonia sihwensis: P5P27_08465
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Entry
P5P27_08465 CDS
T08972
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
gsi
Gordonia sihwensis
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
gsi03016
]
P5P27_08465
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
P5P27_08465
Transfer RNA biogenesis [BR:
gsi03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
P5P27_08465
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
WFN94954
LinkDB
All DBs
Position
complement(1749277..1750467)
Genome browser
AA seq
396 aa
AA seq
DB search
MPLTSPREGVPPVLATADEFAEAARRLRDGSGPIAVDTERASGYRYSQRAYLIQLRRAGS
GSFLIDPIAHPDALEPIIDALDGPEWILHAADQDLPCLRELGFRTESLFDTELAGRLLDF
PKVNLAAMVAEFLHLGLAKGHGAADWSRRPLPADWLNYAALDVEVLIELRNAVAGALDER
GRGEWAAQEFAHVLRRPPAPPRTDRWRRTSNIHNLRTQRQLAVVRELWTAREEIAQRRDI
APGRVLPDSAIVTAATANPTDTAALTSLPVFGGPRQRRQADRWMRAIRKAQQLPESDLPA
KKTPQVGPPPYNRWEQRNPEAAARAGAVRPVVRAIAEEVGVPQENLISPDLLRNLCWEGL
GPSAGADEWLAERGARPWQRALVAAPIDAALDAIRP
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgccactcacttcgccgcgcgagggagtcccgccggtgctcgccaccgcggacgagttc
gccgaagccgcacgccggctgcgcgacggctcgggccccatcgcggtcgacaccgagcgc
gccagcggctaccgctattcgcagcgcgcttatctgatccagctcagacgcgccggatcg
ggcagctttctgatcgatccgatcgcgcacccggacgcactggagccgatcatcgacgcc
ctcgacgggcccgagtggatcctgcacgccgccgaccaggacctgccctgcctgcgcgag
ctcggcttccggaccgagtcgttgttcgacacggagctggcgggtcggctcctcgacttc
ccgaaggtcaatcttgcggcgatggtcgccgaattcctgcacctcggtctcgcgaaaggt
cacggcgcggccgactggtcgcgccgaccgctgccggcggactggctcaattacgccgcc
ctggacgtcgaggtcctcatcgaactgcgcaacgccgtcgccggcgcgctggacgaacgc
ggccgcggcgagtgggcggctcaggagttcgcccacgtcctccggcgcccgcccgcgccg
ccgcgcaccgaccgctggcggcggacgtcgaacatccacaacctgcgcactcagcgtcaa
ctcgcggtggtgcgcgaactctggacggcgcgggaggagatcgcgcagcgccgcgacatc
gcgccgggccgggtgcttcccgactcggccatcgtcaccgcggccacggcgaatccgacc
gataccgcggccctgaccagcctcccggtgttcggcggaccgcgccagcggcgtcaggcc
gaccgctggatgcgcgccatccggaaggcccagcaactgcccgagtcggacctgcctgcc
aagaagactccgcaggtgggaccgcctccctacaaccggtgggagcagcgcaatccggag
gccgcggcccgcgccggcgccgtgcgtccggtggtccgggcgatcgccgaggaggtcggc
gttccgcaggagaacctgatctcccccgacctgctgcgcaacctctgctgggagggtctg
ggcccgagcgccggcgccgacgagtggctcgccgagcgcggtgcccgaccgtggcagcgg
gccctggtggccgcaccgatcgacgcggccctggacgcgatccggccctga
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