Gordonia sihwensis: P5P27_10155
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Entry
P5P27_10155 CDS
T08972
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P5P27_10155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_10155
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P5P27_10155
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P5P27_10155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WFN94850
LinkDB
All DBs
Position
complement(2108691..2112059)
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AA seq
1122 aa
AA seq
DB search
MTALGSDTAFDLTGPLPTGTLVLEASAGTGKTYAIVALAVRYIAGGVPVSELLMATFSNA
ASAELRDRTHSRLTECVAALHDRATARTSGDDLIAFLADADADEVARRRQRLADALSDFD
AATMATTHTFCNRMLSVLGFLGGRQQQFPILENVDDMVAELARDAYLARFAGDPDSAPGY
AEAEQIAVAAVRDPAAALAPDREDERTEESDLRVWIAQQARAHTALRKRLARVRTYDDLQ
QALFEIVTDAEIGDEACRRIRAQFSAVLIDEFQDTDPQQWEIVRRCFHDHLPLVLVGDPK
QSIYAFRGAEVLSYLNAVEAADERQRLTVNWRSDAAVVDGLGALFEGATLGHRQIAYQPV
RAHRSGSRIHGAPAVRIRGFLRGDFTTTTQDGTTPLVAEVRERVTDDVADDIAGVLGGDV
TIDDGYGARSVEPGDIAVLLRANRTIAPLQRALAERGIASVVTSGTSIFATPAARYWWYV
LSAIDTPSRQPRVRLAALTPILGLSAQTLERQGDTGVGALSGRLAELGRVFADGGFAAMA
ARLFGEFGTAERLLGVDGGERLLTDVLQISELCNRHVTESSTGIATLVDWLGRQIDEGSQ
WGQQRDATRRLDRDTEAVQIMTVHASKGLEFPIVYVPFGWDGASHPNPATFLFHEGDRRY
LDVGGKQARGYARRDRQSRSEGAGEDLRLLYVAATRARSQVVLWWAPSTTTARGALHRLL
FTADERRLAARSGDLSPIPDTVPIPAGDTECVGALRGVAAGNPSVVVEPAGRRGRTEWRP
PSDAGTPPELSVARFTRSIDQRWRRTSYSAIVAAAHAAFHAETPGPASPVQAGSEPEDVL
RPDEPDDARAEAGAVSGEVVGTPSLMNGLPFGAGFGTLVHEVLEHVDTAEPDMAAHVRQM
CVQGAAARGVEIDVDVLARALIGVLTTPLGFGDLWSIEPGARLAEMDFELPLSDTAGGFG
LEEVGDLLARHLPGDDPLAPYAEMVRTVSDETFTGYLTGSIDSVLRTAENRFVVVDYKTN
RLRPGDLAVEDFGREAMAEEMMSAHYPLQALLYSVALHRYLRWRLAGYDPARHLGPVQYH
FVRGMAGPQTPPGCGVFQWDLPPALIVEMSELLAGRTEGVGR
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgacggcactcggaagcgacaccgccttcgatctcaccggaccgctgcccaccgggacg
ctggtcctcgaggccagcgcgggcaccggcaagacatacgcgatcgtcgcgctggccgtg
cgctacattgccggcggcgtcccggtgtcggagttgctcatggcgacgttctcgaacgcg
gcctccgccgaattgcgggaccggacgcattctcgtctcaccgagtgcgtcgccgcgctg
cacgatcgggccaccgcacgcacgtccggcgacgatctgatcgccttcctggccgacgcg
gacgccgacgaggtcgcacggcggcgtcaacggctcgcggacgccctgtcggacttcgac
gccgccacgatggcgaccacccacaccttctgcaatcgaatgctctcggtcctcggcttc
ctcggcggccgtcagcagcagttcccgatcctcgagaacgtcgacgacatggtcgccgag
ctcgcgcgagacgcttacctcgcgcgtttcgccggcgacccggattcggcgcccgggtac
gccgaagccgagcagatcgccgtcgccgcggtccgcgatcccgctgcggcactggctccg
gaccgggaggacgagcggaccgaggagtcggacctacgagtgtggatcgctcagcaggcg
cgcgcacacacggcgctgcgcaagcggctggccagggtccgcacttacgacgatctgcag
caggcgctgttcgagatcgtcaccgacgccgagatcggcgatgaggcgtgccgccggatc
cgcgcacagttctcggccgtgctcatcgacgagttccaggacaccgatcctcagcagtgg
gagatcgtcaggcgatgcttccacgatcacctgccgctggtgctggtgggcgatccgaag
cagtcgatctacgccttccgcggcgccgaggtgctgagctacctgaacgcggtcgaggcg
gcagacgagcggcagcggctgaccgtgaactggcgttcggacgccgcggtggtggacggg
ctcggcgcgctcttcgagggcgcgacgctcggtcaccgacagatcgcctatcagccggtt
cgggcgcaccgttccggatcgcggatccacggcgcgcccgcggtccgtatccgcggattc
ctgcgcggcgacttcaccaccacgacgcaggacggcaccactcccttggtcgccgaagtc
cgcgagcgcgtcaccgacgacgtcgccgacgacatcgcgggtgtgctgggcggcgacgtg
accatcgacgacggctacggcgcccggtcggtcgaacccggcgacatcgctgttctgctc
cgcgccaaccgcacgatcgcaccgctgcagcgtgccctcgccgaacggggcatcgcctcc
gtcgtcacctcgggcacctccatcttcgccacacccgcggcccgatactggtggtacgtc
ctgtccgccatcgatacgccgtcgcgacagccacgcgtgcgtctggccgcgctgacgccg
atcctcggactgtcggcccagacgctggaacggcagggcgacacgggtgtcggagcgctg
tcgggacggctggccgaactcggtcgcgtcttcgccgacggcgggttcgcggcgatggcc
gcacggctcttcggcgagttcggcaccgcggagcgattgctcggcgtcgacggaggcgag
cgtctgctcaccgacgtgctgcagatctccgaactgtgcaatcggcatgtcaccgagtcg
tcgaccgggatcgccacgctggtcgactggctcggacgacagatcgacgagggttcgcag
tggggacaacagcgtgacgcgacgcgacggctcgaccgcgacaccgaggccgtccagatc
atgacggtccacgcgagcaagggactcgagttcccgatcgtctacgtgccgttcggctgg
gacggcgccagccacccgaatccggccaccttcctgttccacgaaggcgatcgccgctat
ctcgacgtcggagggaaacaggcgcgcggctatgcgcgccgcgatcggcagtcccgctcc
gaaggcgccggtgaggatcttcgactgctctacgtggccgcgacccgagcccgcagccag
gtggtcctgtggtgggcgccgagcacgacgactgcgcgcggggccctgcaccggctgctc
ttcaccgccgacgagcgtcgactggccgcacggtcgggcgacctgtcgccgattccggac
accgtgccgatcccggccggggacaccgagtgcgtcggcgctctgcgcggcgtcgcagcc
gggaacccctcggtcgtcgtggaaccggcgggtcgccgcggccgcaccgagtggcgccct
ccgtccgacgcgggcacgcctccggaactgagcgtggcacggttcacgagaagcatcgat
caacggtggcgccgaacgtcgtattcggccatcgtggccgcggcgcacgcggcattccac
gccgagacgcccggaccagcctcgccggttcaggcggggagcgaacccgaggacgtgctg
cggcccgacgagcccgatgacgcgcgggcggaggccggtgcggtgtccggagaagtcgtg
ggcacaccgtcgctgatgaacgggctgcccttcggcgccggattcggaaccctcgtccac
gaagtactcgagcatgtggacaccgcggagccggatatggcggcgcacgtgcgtcagatg
tgcgtgcagggcgccgcggcacggggagtcgagatcgacgtcgatgttctcgcccgcgcg
ctgatcggggtgctcaccacacctctgggattcggcgatctgtggagcatcgaacccggc
gcgcgactggccgagatggacttcgaactgccgttgtccgataccgccggcgggttcggc
ctcgaggaggtcggagatctgctcgcgcggcatctgccgggcgacgatccgctggcaccg
tatgcggaaatggtccggacggtctccgacgagaccttcaccggctatctcaccggcagc
atcgactcggtgctgcggaccgccgagaaccgattcgtggtcgtcgactacaagaccaac
cgcctgcgtccgggggatctggcggtcgaggacttcggtcgcgaggcgatggccgaggag
atgatgtccgcgcactatccgctgcaggcactgctgtattcggtggcactccaccgctat
ctgcgctggcggctcgccggctacgaccccgcacggcatctgggtccggtgcagtatcac
ttcgtgcgcgggatggccggtccgcagactccgcccggctgcggcgtctttcaatgggac
ctgccgcccgccctgatcgtcgagatgtcggagctcctcgccggccgaacggaaggagtg
gggcgatga
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