Gordonia sihwensis: P5P27_10160
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Entry
P5P27_10160 CDS
T08972
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P5P27_10160 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_10160 (recC)
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
P5P27_10160 (recC)
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
P5P27_10160 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
WFN94851
LinkDB
All DBs
Position
complement(2112056..2115442)
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AA seq
1128 aa
AA seq
DB search
MLTVHRAEQAGCLVEALADTLSRPLADPMRTEIVAVPERGVERWLRQQLSLRLGTSCGGD
GIAANIAFDSPSFLLRQVLDGVSDDPEAAESWFADRLRWPVLRVVDGHIDDPVLRVLATH
LGTGDARADRGRRLSTASTIAALFTSYGWQRPTMIAEWASGSDTDGAGGELAEHLRWQPW
LWRLVREEVGHPHLAEQLPVVVDRLRADADAVDLPERLSLFGATRIPQTLRNVLAALSER
REVGLYLPHPSPELWSAVQTAGPQRSGRLRAERRPVRVRHPLLASLSRDVQELQEVLAPA
VGATCHHSAEHRRPATLLGALQDGIRRDDPGRPAEGEGLDPGADGSVEVHACHGPQRQVE
VLRDRLLHLFDADPTLEPRDVLIMCPDVEAYAPLIGGVFGQSSRVGDHPAFSLRVRLADR
GIRAQNAVLDVLARVLDLAAGRVRAGDLLDLAATEPVRRRFGFTDDDVDTITGWVQRSGI
RWGVDETQRRRFGLGGFPQGTVRTGLDRILLGVVAEEAENEWLATALPLSGIDSTDTDLA
GRFAEFAERLTTLLETVSEPHSSGQWLRTMIHAADLLTHTDSETEWQRAQAVGMLTDALS
VPEGTPESELKLADMRDLMAQLLIARPTRSNFCTGELTVCSMVPMRSVPHRVIVVLGMDS
GQYPRAGAVDGDDILQVAPMVGERNVRDEDRQVFLDAICAATEHLLVFYTGADALTGART
PPAVVVSELLDALRGVLGVSVGDPVPVLYRHTLHAFDERNFVDDGSGPFSYDAALLPGAR
ALSALTRCRERGPALPVIADERLPRAPGDADVDLDLDELISFLAAPVEGHARQRLGVGLP
EQADEHRDELAVELDGLERWGVGNRYLDALLSGADPHAAQGAELRRGSLPPFAFGTREFG
PIRDKAQAVATAAHGYRDDSADAVDVRVVLPDGRRVYGTVGDVFAGRLVPVSYSRLGPKH
RLAAWIRLLAIRAGSDRDVAEAVVVGSASGRYPSAKVSRIRTPDDAGDLLAVLVAIRDAG
LTAPIGLTLDAAVAAASEFGRSGDPAKARRRAEWAYKKSYGDQNRYAGLVFHGDPDAAVG
FETMAAAVPQPEALSSVAGLLPGDDATDMYIRLAAALFGSLLAHEEDR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
gtgctgaccgtgcaccgcgccgagcaggcgggatgcctcgtggaggcgctcgccgacacc
ctgtcccggccgctggccgatcccatgcggaccgagatcgtcgcggtccccgagcgcgga
gtggaacgctggctccggcagcagctgtcgctgcggctcggcacctcgtgcggcggcgac
ggcatcgccgcgaacatcgccttcgactcgccgtcgttcctgctgcgtcaggtgctcgac
ggcgtgtcggacgatcccgaggccgccgagagctggttcgccgatcgtctgcgatggccg
gtgctgcgggtggtggacggccacatcgacgatcccgtgctccgcgttctcgccacacat
ctcgggaccggagacgcccgcgccgatcgcggacgtcggctctcgaccgcgtcgaccatc
gccgcactgttcacctcgtacggatggcagcggccgacgatgatcgccgagtgggcctcc
ggctccgacacggacggtgcgggaggagaactcgccgagcatctgcggtggcagccgtgg
ctgtggcggctggtccgcgaggaggtggggcatccgcatctggcggagcaactgccggtc
gtggtggaccgtctgcgcgccgacgcggacgccgtcgaccttcccgaacggctctcgttg
ttcggggccacgcggatcccgcagacgctgcgaaacgtgctcgcggcgctgtcggagcgg
cgcgaggtgggcttgtatcttccgcatccctcgcccgaactgtggtcggcggtccagacc
gcggggccgcagcggagtggacggctgcgcgccgaacgccgaccggtgcgcgtgcggcac
ccattgctggcgagcctgtcccgggacgtgcaggagctccaggaggtgctggcgcccgcg
gtcggcgccacctgccaccattccgcggaacaccgtcgtcccgcgacactgctgggtgcg
cttcaggacggcatcaggcgcgacgatcccgggcgcccggccgagggcgagggactcgac
cccggtgccgacggcagcgtcgaggtgcacgcctgccacggtccgcagcgccaggtggag
gtgcttcgcgaccggcttctgcacctgttcgacgccgacccgactctggaaccgcgcgat
gtgctcatcatgtgtcccgacgtggaggcgtacgcaccgctgatcggcggggtcttcggg
cagtcgagccgcgtcggcgaccatccggccttctcgctgcgcgtgcggctcgccgatcgg
ggcatccgtgcgcagaacgcggtgctcgacgtgctcgcccgcgtcctcgacctcgcggcg
ggccgggtccgggccggcgatctgctcgatctggccgcgacggagccggtgcgccgccgg
ttcggcttcaccgacgacgatgtcgacacgatcaccggctgggtccagcgctcaggtatc
cggtggggcgtcgacgagacccagcggcgccgattcgggctcggcggtttcccccagggc
accgtgcggaccgggctcgaccgcatcctgctgggcgtggtcgccgaggaagcggagaac
gagtggctcgccaccgctctgccactgtcgggaatcgattcgacggacaccgatctcgcc
ggaagattcgccgagttcgccgagcgcctgaccacactgctcgagaccgtgtccgaaccc
cattcctccggtcaatggctgcgaacgatgatccacgccgccgatctgctgacccacacc
gactcggagaccgagtggcagcgggcgcaagccgtcggcatgctcaccgatgcgctctcg
gttcccgagggaaccccggagtccgaactcaagctcgccgacatgcgcgatctgatggcg
cagctgctcatcgcgcgtccgacgcgatcgaacttctgcaccggcgaactgaccgtgtgc
tcgatggtgccgatgcgctcggtgccgcatcgggtgatcgtggtgctcggcatggacagc
ggtcaatacccgcgggccggggccgtcgacggcgacgacatcctccaggtggcgccgatg
gtgggggaacggaatgtgcgcgacgaagaccgccaggtgttcctcgacgcgatctgtgcg
gcgaccgagcacctgctggtgttctacaccggcgccgatgcgctgaccggtgcccggacg
ccgccggcggtggtggtctccgagctgctcgacgccctgcgcggggtgctcggggtcagc
gtcggcgatccggttccggtgctgtaccggcacaccctgcacgcgttcgacgaacggaac
ttcgtcgacgacggttccgggcccttcagctacgacgcggccctgcttccgggcgcccgt
gctctgagcgcactcacccgatgccgcgagcggggacccgcgctgccggtgatcgccgat
gagagactcccgcgggcgccgggcgatgccgacgtcgacctcgacctcgacgagctcatc
agctttctggccgcaccggtggagggtcatgcacggcagcgtctcggcgtgggtctgccc
gaacaggccgacgaacatcgggacgaactcgccgtggagttggacggtctcgaacggtgg
ggcgtgggcaaccgctacctcgacgcgctgctcagcggtgcggatccgcacgccgcgcag
ggagccgaactgcggcgcggcagtctgccgcccttcgcgttcggaaccagagagttcggt
cccatccgagacaaggcgcaggcggtggcgactgccgcacacggctatcgtgacgattcc
gccgacgccgtcgacgtccgcgtggtgctgcccgacggccgccgggtgtacgggacggtc
ggagacgtcttcgccggcaggctggtgcctgtcagctattcgcggctcgggcccaagcat
cgcctcgcggcctggatccggttgctggcgatccgggccggttccgaccgcgacgtcgcc
gaagccgtcgtcgtcggcagtgcctccggtcggtacccgtcggccaaggtgagtcgaatc
cgcacccctgacgacgcaggggacctgctggcggtgctcgtcgccatccgtgacgcggga
ctgaccgcgccgatcggcctgaccctcgatgccgcggtggccgcggcgtcggagttcggc
aggtcgggcgacccggcgaaggcccggcgtcgagccgagtgggcgtacaagaagtcgtac
ggcgatcagaaccggtacgccgggctcgtcttccacggggatcccgacgcggcggtcgga
ttcgagacgatggccgcggcggtgccgcagccggaggcgctgtcgtccgtggcgggtctg
ctgcccggcgacgacgcgaccgacatgtacatccgactcgccgcggccctgttcgggtcg
ctcctggcgcacgaggaggaccgatga
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