Gordonia sihwensis: P5P27_11445
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Entry
P5P27_11445 CDS
T08972
Name
(GenBank) DEDD exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03030
DNA replication
gsi03430
Mismatch repair
gsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
P5P27_11445
03430 Mismatch repair
P5P27_11445
03440 Homologous recombination
P5P27_11445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gsi03032
]
P5P27_11445
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_11445
Enzymes [BR:
gsi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
P5P27_11445
DNA replication proteins [BR:
gsi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
P5P27_11445
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
P5P27_11445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
GIY-YIG
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
WFN91400
LinkDB
All DBs
Position
2390091..2391851
Genome browser
AA seq
586 aa
AA seq
DB search
MTVEQLSFADLPEADEFTSAPLRETTFVVVDLETTGGSPENDRITEIGAVKIRGGEVLGE
FATLVDPGRAIPPQIVALTGITTAMLYDAPAVEAVLPSFVEFARGCVLVAHNARFDMGFL
RRSAARAGLPWPFSASLCTVVMARRILSRQEAPSVKLFALADLFDVSVRPTHRALDDARA
TVDVFHRLLERVGDQGVRTVGDLTTYLPRATPAMRAKRTMASGLPHRPGVYLFRGPSEEV
LYIGTAVDLHRRVSGYFNGSDTRTRIAEMVSLATRVDHVECAHALEAGVAELRLLGVHKP
SYNRRSRNPQRGWWITLTAERFPRLKVSRTPGTESLGPVTSRAVALEVADVLSGAAGLRT
CGADLKKASHHWCEGPTEAGRLPDPLVATLPGTCRAASDRPQTLPDYLCRVEAVRDLISG
RSDSLLAVLCERVEYLAQQRRFESAARARDRLSATIETLARTQRLAAVAQRPEVVGARPD
GAGGWELSVVRYGRLAGSAHAARGVAPMAVVERLRAASTTVLPPADDSGPLAGAPAEETA
LIERWLYESGTRLVDVSDQLSLPIGAAERWRDFARIARSAREATSR
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtcgaacagctgtcgttcgccgaccttcccgaggccgacgagttcacctccgct
ccattgcgggagaccaccttcgtggtggtcgacctcgagaccacgggcggcagtccggag
aacgaccgcatcaccgagatcggtgcggtcaagatccgcggaggcgaagtgctcggcgag
ttcgcgacgctggtcgaccccgggcgcgcgatcccgccgcagatcgtcgccctcaccgga
atcaccaccgccatgctctacgacgcgccagccgtcgaggcggtgctgccgtccttcgtc
gagttcgcccgcgggtgcgtcctggtggcgcacaacgcccgcttcgacatggggttcctg
cggaggagcgctgcccgagcgggcctgccgtggccgttctccgcgtccctgtgcactgtg
gtgatggcccgacggattctgagcaggcaggaggcgccgagcgtcaaactcttcgcgctg
gccgatctgttcgacgtctcggtccggccgacccaccgtgcgctggacgacgcccgtgcc
acggtcgacgtcttccatcgacttctggagcgcgtcggcgaccagggggtgcgaacggtg
ggcgatctgaccacgtatctgccccgggcgacgccggcgatgcgcgccaaacgcacgatg
gcgtccgggctcccccatcggcccggcgtctacctcttccgcggtccgtcggaggaggtc
ctatatataggtaccgccgtcgacctccaccgtcgcgtctccgggtacttcaacggaagc
gacacccgcacccggatcgccgagatggtctcactcgcgacccgcgtcgatcacgtcgag
tgcgctcatgcgctggaggccggggtcgccgaactgcgactcctcggagtccacaagccg
tcctacaatcgccgctcccgcaatccgcagcggggctggtggatcaccctgaccgccgag
cgcttcccgcgcctcaaggtgtcgcgcacgccggggaccgaatcgctcgggccggtgacg
agccgggcggtcgcgctggaggtggcggacgtcctctccggggcggcggggctgcggacg
tgcggcgccgacctgaagaaggcgagtcaccactggtgtgaggggccgacggaggcggga
cgactgccggatccgctcgtcgcgacgctgccgggaacgtgccgcgccgccagtgaccgc
ccgcagacgctgccggactacctctgccgagtcgaggccgtacgcgacctgatctcggga
cggtccgactcgcttctcgcggttctgtgcgaacgcgtcgagtacctggcccagcagcgc
cggttcgagtcggcggcccgggcgcgcgaccggctgtcggcgaccatcgagaccctcgcc
cggacgcagcggctcgcggcggtggcgcagcggccggaggtcgtgggcgcacggcccgac
ggtgccggcggctgggagctgagcgtcgtcagatacgggcgcctggccggctccgcgcac
gcggctcgcggcgtggccccgatggcggtcgtcgaacgactcagagccgcgtccacgacc
gtgttgcccccggccgacgacagcggaccgctcgccggtgcgcctgccgaggagacggcg
ctgatcgagcgatggctgtacgagtccggtacgcggttggtcgacgtgagcgaccagctc
tcattgccgatcggcgcggccgagcgctggcgcgacttcgcacgcattgcgcgatcggcg
cgcgaggcgacgagtcgctaa
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