Gordonia sihwensis: P5P27_11655
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Entry
P5P27_11655 CDS
T08972
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi00061
Fatty acid biosynthesis
gsi00071
Fatty acid degradation
gsi01100
Metabolic pathways
gsi01212
Fatty acid metabolism
gsi02024
Quorum sensing
gsi04146
Peroxisome
Module
gsi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
P5P27_11655
00071 Fatty acid degradation
P5P27_11655
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
P5P27_11655
09145 Cellular community - prokaryotes
02024 Quorum sensing
P5P27_11655
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsi01004
]
P5P27_11655
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gsi04147
]
P5P27_11655
Enzymes [BR:
gsi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
P5P27_11655
Lipid biosynthesis proteins [BR:
gsi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
P5P27_11655
Exosome [BR:
gsi04147
]
Exosomal proteins
Exosomal proteins of breast milk
P5P27_11655
Exosomal proteins of breast cancer cells
P5P27_11655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
WFN91439
LinkDB
All DBs
Position
complement(2433568..2435130)
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AA seq
520 aa
AA seq
DB search
MIDDGSDLPRPTSGLTMFHEAVAAGSGRPLIRYFDGVLTMRDVDRHSDALAHHLIGQGFS
SGDRLAILTQNSPAFVIALVAAWKAGGIAVPLNPMNTRRETAFALVDTGARALVCLDELY
AAGAQAVIADGDTDVRTVVLTSIGDWAAKTDPAPGSLPALPWSGPVRGADPGRDDPALLL
YTSGTTGVPKAAVVTHGNLTAGAELFRRWTTIGSDDEILGITPLFHVTGIVGHVALALRV
GAPLILAHRFDPPVLVRALREHRPAFVIGVISAIVALAEEADGPDDFRSVKWLATGGAPV
SADTAARVAERTGTELSIVYGLTETTSPAIATPVGRLGPIDRESGALSIGMPVAATRCRI
LDDSGEPVAPGVIGEVEIAGPQVSPGYWQDGSIVGGPGDGALRTGDIGFRDTDGWVFLID
RRKDMITTAGYKVWPREVEEVLYRHPAIAEAAVVGVPDDTRGEVVSAFIAFESGATATVT
DIEEFAAAQLAAYKRPRSITVLPALPKTATGKVLRRRLRG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgacggatccgacctgccgaggccgacatccgggctcacgatgttccacgag
gcggtcgccgccggctccggccgtccgctgatccgctacttcgacggcgtgctcacgatg
cgcgacgtcgacaggcattcggatgcgctcgcgcaccacttgatcggacagggattctcc
tcgggcgaccggctggcgatcctcacgcagaacagccccgcattcgtcatcgccctcgtc
gccgcgtggaaggccggcgggatcgcggtaccgctcaacccgatgaacacccggcgggag
acggcgttcgcgttggtcgacaccggtgcgcgggcgctcgtgtgcctcgacgagttgtac
gccgcgggtgcgcaagcggtgatcgccgacggcgacaccgatgtgcggacggtggtgctg
acctcgatcggcgactgggcggcgaagaccgacccggcgccgggatcgctgcccgcgctg
ccgtggtccggcccggtgcgcggcgccgatccgggccgcgacgaccccgctctgctgctg
tacacgtcgggcaccaccggagtgccgaaggccgccgtggtgacccacggcaacctcacc
gcgggcgcagagctgttccgccggtggacgacgatcggctccgatgacgagatcctcggg
atcactccgctgttccacgtcaccggaatcgtcggccacgtggcgctcgcgctgcgtgtg
ggggcgccgctgatcctcgcgcaccggttcgatccgccggtgctggtgcgcgcgctgcgc
gagcatcggccggcattcgtgatcggcgtcatcagtgcgatcgtcgcgctcgccgaggaa
gccgacggtcccgacgacttccggtccgtgaaatggctcgcgaccggcggtgcgccggtg
tcggcggacaccgccgcacgggtggccgaacgcacgggcaccgagctcagcatcgtctac
gggctcaccgagaccacctcgcccgcgatagcgacgcccgtggggcggctcgggccgatc
gaccgcgagtccggcgcactgtcgatcgggatgccggtcgcggccacgcgctgccgaatc
ctcgatgactccggcgagccggtcgccccaggtgtcatcggcgaggtggagatcgccgga
ccgcaggtgagccccgggtactggcaggacggttcgatcgtcggcggcccgggcgacggc
gcgctgcggaccggcgacatcggcttccgcgatacggacgggtgggtgttcctgatcgac
cggcgtaaggacatgatcaccaccgccggctacaaggtctggccgcgcgaggtggaggag
gtgctctaccgccatccggcgatcgccgaggccgccgtcgtcggagtgcccgacgacaca
cgaggcgaagtggtcagcgccttcatcgccttcgaatccggggccaccgccaccgtcacc
gacatcgaggagttcgcggcggctcagctcgcggcgtacaaacgtccccgcagcatcacc
gtgctccctgccctgccgaagacggccaccggcaaggtgctgcgcagacgcctgcgcgga
tga
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