Gordonia sihwensis: P5P27_13255
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Entry
P5P27_13255 CDS
T08972
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
P5P27_13255
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_13255
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
P5P27_13255
DNA repair and recombination proteins [BR:
gsi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
P5P27_13255
Prokaryotic type
P5P27_13255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Avr2
Motif
Other DBs
NCBI-ProteinID:
WFN91743
LinkDB
All DBs
Position
complement(2751838..2752515)
Genome browser
AA seq
225 aa
AA seq
DB search
MSAKPLAELIDPGWAQALAPVEETVARMGRFLREEIAAGRRYLPAGENVLRAFAQPFDDV
RVLIVGQDPYPTPGHAVGLSFSVAPDVRPIPRSLQNIYQEYCEDLGYPRPANGDLTPWAR
QGVLLLNRVLTVRPGEPASHRNKGWEEVTECAIKALAARDEPMVAILWGNDARQLVKWLP
DVPVIESPHPSPLSASRGFFGSRPFSRANEELLDLGGDPVDWRLP
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgccaagccgttggccgagctgatcgatcccggctgggctcaggcactggcgccg
gtcgaggagacggtcgcacggatgggccgattcctgcgcgaggagatcgcggccggccgt
cgctacctgcccgccggagagaacgtgctgcgcgcgttcgcgcagcccttcgatgacgtc
cgggttctcatcgtcggacaggatccctatcccacgccggggcacgctgtgggactgagc
ttctccgtggcgccggacgtccgaccgattccgcgatcgctgcagaacatctaccaggaa
tactgcgaagacctcggttatccccgtccggccaacggcgatctgacgccgtgggcgcgg
cagggcgttctccttctcaacagagttctgacggtgcgcccgggcgaaccggcgtcccac
cgcaacaaggggtgggaagaggtgaccgagtgcgcgatcaaggcgctggccgcgcgcgac
gagcccatggtggcgatcctgtggggcaacgacgcccggcagctggtgaagtggttgccc
gacgtcccggtcatcgaatcgccccacccgtcgccgctctcggcgtcgcgcgggttcttc
ggttcgcgacccttctcccgcgccaacgaggaactgctcgatctcggcggcgatccggtg
gactggcgtctgccctga
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