KEGG   Gordonia sihwensis: P5P27_13295
Entry
P5P27_13295       CDS       T08972                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
gsi  Gordonia sihwensis
Brite
KEGG Orthology (KO) [BR:gsi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:gsi03032]
    P5P27_13295
   03036 Chromosome and associated proteins [BR:gsi03036]
    P5P27_13295
   03400 DNA repair and recombination proteins [BR:gsi03400]
    P5P27_13295
DNA replication proteins [BR:gsi03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    P5P27_13295
Chromosome and associated proteins [BR:gsi03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    P5P27_13295
DNA repair and recombination proteins [BR:gsi03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      P5P27_13295
SSDB
Motif
Pfam: Bac_DNA_binding HC2 HU-HIG HU-CCDC81_bac_2
Other DBs
NCBI-ProteinID: WFN91751
LinkDB
Position
complement(2759750..2760493)
AA seq 247 aa
MNKAELIEELTKRLDADRKTATNFVEQAIDTIVRAVNKGESVTITGFGVFEKRRRAARVA
RNPRTGETVKVKATSIPAFRPGAQFKAIVSGKQKLKSGQPAVKRASATPAAGSGTAKKAA
PAKSTAAAKKTTAAKKTTAKKTTATKTTAAKKTAATKAAAKKTTPAKKTAAAKKAPAKKT
AAKKTAPAKTAGAGTTATSTAAEKTAPAKKATAKKTAAAKKTTAAKKSAPAKKAAAKKSA
PTKGADD
NT seq 744 nt   +upstreamnt  +downstreamnt
atgaacaaggcagaactcatcgaggaactcaccaaaagactcgatgcggacaggaagaca
gccaccaacttcgtcgagcaggcgatcgacaccatcgttcgcgccgtgaacaagggtgag
agcgtcacgatcaccggtttcggcgtcttcgagaagcgccgtcgtgcagcacgcgtggca
cgcaatccccgcaccggagaaacggtgaaggtgaaggccacgtcgatcccggccttccgg
ccgggtgcacagttcaaggcgatcgtctccggcaagcagaagctcaagtcggggcagccc
gcggtgaagcgcgcgtcggcgacaccggccgccggttccggaaccgccaagaaggccgca
ccggctaagtccaccgctgcggcgaagaagaccaccgcggcgaagaagacgacggccaag
aagacgacggccacgaagaccacggccgcgaagaagacggccgccacgaaggcggccgcg
aagaagacgacgccggcgaagaagaccgccgccgcgaagaaggcgcccgcgaagaagacc
gcggccaagaagacggctccggcgaagaccgccggcgcgggtacgacggccacgagcacc
gcggccgagaagacggcaccggcgaagaaggcgacggccaagaagaccgctgctgccaag
aagacgacggcggccaagaagtccgctccggcgaagaaggccgccgccaagaagtccgca
ccgacgaagggcgccgacgactga

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