Gordonia sihwensis: P5P27_13805
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Entry
P5P27_13805 CDS
T08972
Symbol
dapE
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
gsi
Gordonia sihwensis
Pathway
gsi00300
Lysine biosynthesis
gsi01100
Metabolic pathways
gsi01120
Microbial metabolism in diverse environments
gsi01230
Biosynthesis of amino acids
Module
gsi_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
P5P27_13805 (dapE)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gsi01002
]
P5P27_13805 (dapE)
Enzymes [BR:
gsi01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
P5P27_13805 (dapE)
Peptidases and inhibitors [BR:
gsi01002
]
Metallo peptidases
Family M20
P5P27_13805 (dapE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
WFN91844
LinkDB
All DBs
Position
complement(2868634..2869740)
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AA seq
368 aa
AA seq
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MSSSRLDLTADPIELTAALVDVPSVSRDESEIADAVEAALRAQTDGFEVVRHGNCVLARS
HRGKPTRVILAGHLDTVPIVDNVPSRRTVTDEEGEVLHGCGTVDMKSGDAVFLHLAATLE
DPAHDLTLIFYDCEEIAAEFNGLGTIERELPDWLEGDAAILGEPTAGQIEAGCQGTLRVR
FTASGTRAHSARAWMGDNAIHKLGRMLTTLGAYEPRRVDIDGCEYREGLSAVGIHGGVAG
NVIPDEAYVDVNFRFAPDRSPEQAFDHVREVFAADLADGTLTATVTDSAAGALPGLSHPA
AAKLVEAAGGRFRAKYGWTDVSRFAALGIPAVNLGPGDPSLAHRVDERVPVVQITEVAEI
LRTYLTAD
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
gtgagctcttcgaggctggacctgaccgccgatcccatcgaactgaccgccgcgttggtc
gacgtccccagtgtgagccgcgacgaatcggagatcgccgacgcggtggaggccgctctc
cgcgcgcagaccgacggcttcgaggtggtccgccacggcaactgcgtcctcgcgcggtcg
catcgaggcaagccgacgcgggtgatcctcgccggtcatctcgacaccgtgccgatcgtc
gacaacgtcccctcgcggcggaccgtcaccgacgaggagggcgaggtgctgcacggctgc
gggacggtggacatgaaatcgggagacgcggtgttcctccacctggccgcgaccctcgag
gaccccgcgcacgatctgacgctgatcttctacgactgcgaagagatcgccgcggagttc
aacggactggggaccatcgagcgcgaactgcctgactggctcgagggcgacgcggcgatt
ctcggcgaaccgacagcgggccagatcgaggcgggatgccaggggacgctccgcgtccga
ttcaccgcaagcggaacgcgcgcacattctgcgcgagcctggatgggcgacaatgcgatt
cacaaactcggccggatgctgacgaccctcggggcgtatgaaccgcggcgcgtcgacatc
gacggctgcgaataccgggaaggactgtcggcagtcgggattcacgggggcgtcgcggga
aatgtgattcccgacgaggcctacgtcgatgtgaatttccgcttcgcccccgaccgttca
ccggagcaggccttcgaccacgtccgggaggtcttcgccgcggacctcgccgacgggacg
ctgacggcgacggtgaccgactcggccgcgggggcgctcccggggctgtctcatccggcc
gccgccaagctggtggaggccgcgggcggacgcttccgggcgaagtacgggtggacggac
gtgtcgcggttcgcggccctgggcatccccgcggtgaacctgggtccgggtgacccgagc
ctggcgcaccgcgtggacgagcgcgttccggtagtgcagatcaccgaggtcgctgagatc
ctgcgcacctatctcaccgccgactga
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