Gordonia sihwensis: P5P27_18330
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Entry
P5P27_18330 CDS
T08972
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
gsi
Gordonia sihwensis
Pathway
gsi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
P5P27_18330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_18330
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
P5P27_18330
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WFN92686
LinkDB
All DBs
Position
complement(3845735..3846595)
Genome browser
AA seq
286 aa
AA seq
DB search
MRSIWRGDLSFGLVNVPVKVYSATESHDRSSHQVDSADGARIRYRRVREGTDTEVEFSKI
ANAYESESGEQVVLTKEDLATLPVNKSPEISILEFVPIDQVDPIYFDKPYYLEPASKSPK
AYVLLAKALETTERLAIANFTLRNRTRLAALRVIDGVMTLQTLLWPDEVRVPDFDFLNAD
VEIRDQELDMASSLIETMASDFDPSQFEDTYQVELGKLIEARADGGQAFSETEEEAPDDD
SEVADLLAALRASVKSRGREVEDEKPPAKKAAKKAPAKKAAKKKSA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcgatctggagaggtgatctgagctttggtctggtgaacgtgccggtcaaggtg
tactccgccacggagagccacgaccgcagttcgcatcaggtcgattccgccgacggagcc
cggatccggtatcggcgggtgcgggagggcaccgataccgaggtcgagttctccaagatc
gccaacgcctacgagtccgagagcggcgagcaggtggtgctgaccaaggaagacctcgcg
accctgccggtcaacaagagcccggagatctcgatcctcgagttcgtgccgatcgaccag
gtggacccgatctacttcgacaagccgtactacctggagccggcgtccaagtcgccgaag
gcgtatgtgctgctcgcgaaggcgctggagaccaccgagcgtctcgccattgcgaatttc
acgctccggaaccggacacggctggcagcgctgcgggtcatcgacggcgtgatgaccctg
cagacgctgctgtggccggacgaggtccgggtaccggacttcgacttcctgaacgccgac
gtcgagatccgcgatcaggaactggacatggcgtcctcgctcatcgagacgatggcctcg
gacttcgaccccagccagttcgaggacacctatcaggtggagctcggaaagctcatcgag
gcgcgagccgacggtggccaggcattctcggagaccgaagaggaagcgcccgacgacgac
tcggaggtcgcggaccttctcgcggcgctgcgggcgtcggtcaagagccgcggccgggag
gtcgaggacgagaaaccgcccgcgaagaaggcggcgaagaaggctccggccaagaaggcc
gccaagaagaagtcggcctga
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