Gordonia sihwensis: P5P27_19175
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Entry
P5P27_19175 CDS
T08972
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
gsi
Gordonia sihwensis
Pathway
gsi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
P5P27_19175 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsi03400
]
P5P27_19175 (recF)
DNA repair and recombination proteins [BR:
gsi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
P5P27_19175 (recF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_21
ABC_tran
Septin
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
WFN92834
LinkDB
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Position
4028049..4029299
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AA seq
416 aa
AA seq
DB search
MFVRELTLRDFRSWPHAQFTLSPGTTVFVGRNGFGKTNLLESLFYVATLRSHRVSSDAPL
VRTDAEAARVTATVENDGRELTVELTIPAQGANKATINTRPVRRTREVLGILRAVLFAPE
DLALVRGEPGERRRFIDELVAQLRPLAAGAKADYDRVLRQRSALLKTASAAMRRGGSQAD
SVLGTLDVWDAQLAETGAQVTASRIAVVRQLAPFVTEAYSSIAPHSRPAHISYRSAAGAA
VDASPGGDDAVPAIRDILAERLAELRSKEIERGMCLVGPHRDDLLLGLGDEPAKGFASHG
ESWSFALSLRLGSVELLRADGVEPIIMLDDVFAELDVTRRRLLADFTSGADQLLITAAVA
DDIPESIGGRRICVGVTDDDGRRHSVVTADDAPEGGPTSAGASGADTAPDEGSDDD
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttgttcgttcgcgagctgactctgcgcgacttccggtcctggccgcacgcgcagttcacg
ttgtcgcccgggaccacggtcttcgtcggtcgcaacggtttcggcaagaccaatctcctc
gaatcgctgttctatgtcgcgaccctgcgctcgcatcgggtctcgtcggacgctccgctg
gtgcggaccgacgccgaggcggctcgggtgacagcaacggtggagaacgacggccgcgaa
ctcaccgtcgagctgacgatcccggcccagggcgccaacaaggcgacgatcaacacgcga
ccggttcggcgcacccgcgaagtgctcggaatcctgcgcgcggtgctgttcgcacccgag
gacctcgcactcgtgcgcggcgaaccgggggagcgacgccgcttcatcgacgaactggtg
gcgcagctgcgaccgctcgcggcgggcgcgaaggccgactacgaccgggttctccgacag
cgatccgcgctgctcaagactgcgagtgcggcgatgcgccggggcgggtcacaggccgat
tcggtgctcggaaccctggacgtgtgggacgcccaactcgccgagacgggtgcgcaggtc
accgcctcccgcatcgcggtggtgcggcagctcgccccgttcgtcaccgaggcctactcg
tcgatcgccccgcactcgaggcccgcgcacatctcgtaccggtccgccgccggcgccgcc
gtcgacgccagcccaggcggtgacgacgcggtgcccgcgatccgcgacatcctcgccgag
cgtctcgccgaactgcgcagcaaggagatagagcgggggatgtgcctggtgggaccgcac
cgcgacgacctcctgctcggtctcggcgacgaacccgcgaagggtttcgccagccacggc
gagagctggtcgttcgcgctgtcgctgcggctcggcagtgtcgaactgctgcgggccgac
ggcgtcgaaccgatcatcatgctcgacgacgtcttcgccgaactcgacgtcacccggcgc
agactgctggccgacttcacctccggcgccgatcagctgctgatcaccgccgccgtcgcc
gacgacatccccgaatcgatcggcggacgccggatctgtgtcggagtcaccgacgatgat
ggtcgcaggcactcggtggtgaccgccgacgacgcgcccgaagggggaccgacctcggcc
ggggcgtccggcgcggataccgctccggacgaggggagtgatgatgactga
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