Gordonia sihwensis: P5P27_20075
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Entry
P5P27_20075 CDS
T08972
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
gsi
Gordonia sihwensis
Pathway
gsi00074
Mycolic acid biosynthesis
gsi01100
Metabolic pathways
gsi01110
Biosynthesis of secondary metabolites
Module
gsi_M00887
Mycolic acid biosynthesis, meromycolic acid + alpha-carboxyacyl-CoA + trehalose => TMM => TDM/mAGP/GMM
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09100 Metabolism
09103 Lipid metabolism
00074 Mycolic acid biosynthesis
P5P27_20075 (pks13)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsi01004
]
P5P27_20075 (pks13)
Lipid biosynthesis proteins [BR:
gsi01004
]
Polyketide synthase
Modular PKS
P5P27_20075 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
DUF7080
Thiolase_N
Lipase_3
Abhydrolase_3
Motif
Other DBs
NCBI-ProteinID:
WFN92999
LinkDB
All DBs
Position
4229141..4234510
Genome browser
AA seq
1789 aa
AA seq
DB search
MSETENTAPSDSTAPSDTTGPTERTGPSESTESPAGRAVSNGETVGDLTVDELRDWLRNW
VSRATGVAVEQISDDRPMEEFGLASRDAVALAADVEDFTGVILTATAAYNHPTIASLAKR
IIEGDPDEGLDVEADRFWERERSADDDIAIVGLATRFPKAGTTPESTWEALISGVDGITD
LPDDRWLEFKADPRLAEAIEKGNVRGGYLDDVTGFDADFFQMSPREVENVDPQQRLALEL
TWEALEHAHIPPSDLRGGQVGVFMGTSTNDYQLLATLGLGEGASETAAYALTGTATSIIA
NRVSYFFDFHGPSLAIDTACSSSLVAVHEGVRSLRNGDSDVVIAGGVNMLITPAATLGFD
QIGAQAPDGRIKAFSSDANGMIRAEGGGVFVLKRMADARRDGDTVLAVIAGSAVNSDGRS
NGIFAPNPEAQVEVLRSAYADAAIDPRTVDYVEAHGTGTVLGDPIEADALGRVVGRGRSG
DAPMLLGSAKTNFGHMESAAGAGALAKVVLSLQNDRLPASLNYAGPNPYIQFEATNLRVI
TEPTEWPRYSGHAVSGVSGFGFGGTNAHVVVREVLPSDFEDRAASPADADAAAGVPVPDD
LDDDDFLTEAERAVLAAQAKREPVAAEAPEADPAEGFAPAAVPGAVVPLVISGFLASRRR
KAAAELVEWLESDEGRQTPLAEIGRALAHRNHGRTRSVVMARTYEDAVKGMRAVAEGKSL
PFVYTCDSPDAASAVWLLSGFGSQHRKMAKQLYTENPVFAKYADRVDAYIQRELGYSMVE
IFLDDARTYEIETAQIGIYTIQVALADTMRHYGAEPGVLVPHSMGEASAAYISGGLSLED
ATRVICQRSRLMGEGEAMLTGDAVRFMALVEYSAEEINDVLVDYPDLEICVYAAPTHTVI
GGPGPQVDAIVARAEAEGKLGRKLQTKGASHTSQMDPLLGELSYEITGIEPQPLKYGVYS
SVDRETFYRPGTPDVFTIDYYLKGLRHSVWFAQAIAKSVEAGHRTFVELSPNPAVLISVA
ATTFGAGVHDAELIETLRRKEDESYGLVNALMKLYVHGHPVDVAALFGTGPDQRFANIPR
TRFERKPYWIDAVISGGSGAGSVPGAHVALPDGRHAWEVNAAAVTDPRELVLAAAKQVLG
SGAAVAAVESLGDFPTDGTVTTTLTGHPGGAAISVHAGPQGGFALLYQAAVTGGTVREPV
PSATGADAQTPAEAAKASGFVDEKVVVEDEVVDVIGDRWSPDSGESVGDRLAVIVGESMG
YDPEDLPREIPLIELGLDSLMAVRIKNRVEYEFEIPQLQLQAMRQADLSDVEKFVAFAVT
HRDQLDDLEKATGGGELDTAALNAYIDAELAKDALKGQAPDAPEPAEQVEPVEPTTSASE
ESSRSQVTEAPKMAETATDTPPAQAPTITDQASVAEASGTDVPPRDAAERLTYGAYAVVT
GKSAGGVFNKLPVLDDETAEKLTERLNERTGGEIDVEDVLDSETIEELSNYVRQHMEASA
DIDGFVRFLRVPKNSDGTPKHTFDTAAGDPTPMLVFHPAGGNTSAYEALLKRLPDDQPVI
GFDRVEGTIEERVRQYMPRLREVQPHGPYVLVGWSLGGALAYGAAQLLREEGEEIAFVGL
IDVVRPTRDVPDTPENKRARLERWKAFAIKTYGLDEDVPIPMDRLVAADDNEQFAIITEM
MSMSGTKIPGGIIEHQRTSFLDNRALTEIDPTPYDGKVVLYRADKMHDGAIELEPQWAEI
DEDGRWGEVVDDLEIIHIGGDHLAIVDEPYVAKVAADLARRMADISTEK
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactgagaacaccgcgccgtctgacagcactgcgccctccgacaccactggg
cccaccgagcgcaccgggccctccgagagcactgagtccccggccggccgcgccgtctcg
aacggcgagaccgtcggcgacctgaccgtcgacgaactgcgcgactggctccgcaactgg
gtgtcgcgggccacgggtgtggccgtcgagcagatctccgacgaccgcccgatggaggag
ttcggactggcctcgcgggacgccgtcgcgctcgcggccgacgtcgaggacttcaccggg
gtcatcctcaccgcgaccgccgcgtacaaccacccgacgatcgcgtcgctggccaagcgg
atcatcgaaggcgatcccgacgagggactcgacgtcgaggccgaccggttctgggagcgt
gagcgatcggccgacgacgatatcgccatcgtcggcctggccacccggttccccaaggcg
ggcaccaccccggagtcgacctgggaggcgctgatcagcggcgtcgacggcatcaccgat
ctgccggacgaccggtggctcgagttcaaggccgacccgcgactggccgaggccatcgag
aagggcaacgtccgcggcggctacctggacgacgtgacgggcttcgacgccgacttcttc
cagatgagcccgcgcgaggtggagaacgtcgacccgcagcagcggctcgcactggagctg
acgtgggaggcgctggagcacgcgcacatcccgccgagtgacctgcgcggtggccaggtg
ggcgtcttcatgggcacctcgaccaacgactaccagttgctggcgaccctcgggctcggc
gaaggcgcatcggagacggccgcgtacgcgctgaccggtacggcgacgtcgatcatcgcg
aaccgagtgtcgtacttcttcgacttccacggcccgtcgctcgccatcgacacggcgtgc
tcgtcgtcgctggtcgccgttcacgagggcgtgcgcagcctgcggaacggtgattcggat
gtcgtcatcgccggcggcgtcaacatgctcatcaccccggccgcgacgctcggcttcgac
cagatcggcgcacaggcgccggacggtcggatcaaggccttctcctcggacgccaacggc
atgatccgcgccgagggcggcggcgtcttcgtcctcaagcggatggccgacgcccgccgc
gacggcgacaccgttctcgcggtgatcgccggttccgcggtcaactccgacggacgctcg
aacggcatcttcgcgccgaatcccgaagcccaggtggaggtgctgcgctcggcgtacgcc
gacgccgccatcgacccgcgcaccgtcgactacgtcgaggcgcacggcaccggaaccgtg
ctcggcgacccgatcgaggccgatgcgctcggccgcgtggtcggtcgcggccgcagcggc
gacgcgccgatgctgctcggctcggccaagaccaacttcggtcacatggagtcggcggcg
ggcgccggtgcgctcgccaaggtggtgctctcgcttcagaacgacagactccccgcttcg
ctgaactacgcgggacccaacccgtacatccagttcgaggccactaacctccgggtgatc
accgaaccgaccgagtggccgcggtactccgggcacgccgtctccggtgtctccggattc
ggtttcggcggaaccaacgcgcacgtcgtggtccgcgaggtgctgccgtccgacttcgaa
gaccgcgcggcctcgcccgccgacgccgacgccgccgccggggtcccggtgcccgacgat
ctcgacgacgacgacttcctcaccgaggccgagcgggcggtgctcgcggctcaggccaag
cgtgagccggtggccgcggaggcacccgaggccgatccggcggagggcttcgcgccggcc
gccgtccccggcgctgtagtgcccctggtgatctccggttttctggcctcacgccggcgc
aaggccgccgcggagctggtcgagtggctggagtcggacgagggcaggcagacgccgctg
gcggagatcggccgtgccctggctcaccgcaaccacggccgcacgcgctcggtggtgatg
gctcgtacgtacgaggacgcggtcaagggcatgcgcgcggtcgccgaaggtaagtcgctg
cccttcgtctacacctgcgactctcccgacgccgcgtccgcggtgtggttgctttccggt
ttcggctcgcagcatcgcaagatggccaagcagctgtacaccgagaacccggtgttcgcg
aagtacgccgaccgcgtcgacgcctacatccagcgggagctggggtattcgatggtcgag
atcttcctcgacgatgcgcggacgtacgagatcgagaccgcgcagatcggcatctacacg
atccaggtggcgctggccgacacgatgcgccactacggcgccgagcccggcgtccttgtt
ccgcactcgatgggcgaggcgtcggctgcctacatcagcggcggactgtcgctggaggac
gccacgcgggtgatctgccagcgttcgcgcttgatgggcgagggcgaggcgatgctgacc
ggcgacgcggtgcgcttcatggcgttggtcgagtacagcgcggaagaaatcaacgacgtc
ctcgtggactacccggacctcgagatctgcgtctacgcggctcccacgcacacggtgatc
ggcggtccgggaccgcaggtggacgcgatcgtggcgcgtgccgaggccgagggcaagctg
ggccgcaagctgcagaccaagggcgcgagccacacctcgcagatggacccgctgctcggt
gaactctcctacgagatcaccggcatcgagccgcagccgttgaagtacggcgtctacagc
tcggtggaccgcgagaccttctaccgtccgggcacccccgacgtgttcacgatcgactac
tacctcaagggcctgcgccacagtgtgtggttcgcccaggcgatcgcgaagtcggtggag
gccgggcaccgcacgttcgtcgaactctcgccgaatcccgccgtcctgatctcggtggcc
gccaccacgttcggcgccggggtgcacgacgcggagctgatcgagacgctgcgccgcaag
gaggacgagagctacgggctcgtcaacgcgctgatgaagctgtacgtccacgggcatccg
gtggatgtggcggctctgttcggcactggaccggatcagcggttcgcgaacattccgcga
acgcggttcgagcgcaagccgtattggatcgatgcagtgatctccggtggctcgggtgcc
ggttcggtgccgggcgcgcacgtcgcgctgcccgacggcaggcacgcctgggaggtcaac
gccgcggcggtcaccgatccgcgggagctggtgctcgccgcggcgaagcaggtgctcggt
tccggcgccgcggtggcggcagtcgagtctctcggtgatttcccgaccgacggcacggtc
acgaccacgctcaccggccacccgggtggcgcggcgatcagtgtgcacgccggtccgcag
ggcggattcgcgctgctctaccaggccgcggtgaccggcggcacggtgcgcgagccggtg
ccgtccgcgaccggcgcggacgcgcagacgcctgccgaggccgcgaaggcctccggcttc
gtcgacgagaaggtggtcgtcgaggacgaggtcgtcgacgtgatcggcgaccggtggagc
ccggactcgggagagagcgtgggcgaccgcctcgcggtcatcgtcggtgagtcgatgggc
tacgaccccgaggacctgccgcgggagatccccctcatcgaactgggcctcgactccctg
atggcggttcgcatcaagaaccgcgtcgagtacgagttcgagatcccgcagctgcagctg
caggcgatgcgacaggctgatctgtcggacgtcgagaagttcgtcgccttcgcggtcacc
caccgcgatcagctcgacgacctggagaaggccaccggcggcggagaactcgacaccgcc
gcgctgaacgcctacatcgatgcggaactggccaaggatgctttgaagggacaggcgccc
gatgcgccggagcctgcagagcaggtcgagcccgttgagccgacgacgagcgcgagcgag
gagtcgagtcggagccaggtgaccgaagcgcccaagatggccgagaccgccaccgacacc
ccgcccgcacaggctcccaccatcaccgaccaggcgtcggttgcggaggcctcgggcacc
gatgtgccgccgcgcgatgctgccgaacgcctgacctacggtgcgtacgcggtggtgacc
ggcaagtcggccggtggcgtcttcaacaagctgccggtgctcgacgacgagaccgcggag
aagctcaccgagcggctgaacgagcgcaccggaggcgagatcgacgtcgaggacgtcctc
gattcggagacgatcgaggagctctcgaactacgtccgtcagcacatggaggcgtctgcc
gacatcgacggcttcgtgcggttcctgcgtgtcccgaagaattccgacggcacgccgaag
cacacgttcgacaccgccgcgggcgacccgacgccgatgctggtgttccaccccgcgggc
ggcaacacctcggcctacgaggcactgctcaagcggctgccggacgaccagccggtgatc
ggcttcgaccgagtcgagggcaccatcgaagagcgggtacggcagtacatgccgcgcctg
cgcgaggtgcagccgcacggtccgtatgtgctggtgggctggtctctgggcggggcgctg
gcctacggcgccgcacagctgctccgcgaggagggcgaggagatcgccttcgtcggactg
atcgacgtggtgcgcccgacccgggacgtgcccgacaccccggagaacaagcgagcgcgg
ctggagcgttggaaggcgttcgcgatcaagacctacgggctcgacgaggacgtgccgatc
ccgatggaccggctcgtcgccgccgacgacaacgagcagttcgcgatcatcaccgagatg
atgtcgatgtcggggaccaagattccgggcgggatcatcgagcatcagcggacgtcgttc
ctcgacaaccgtgcgctcaccgagatcgatcccactccgtacgacggcaaggtggtgctc
taccgcgcggacaagatgcacgacggagccatcgaactcgagccgcagtgggccgagatc
gatgaggacgggcgctggggcgaggtggtggacgatctggagatcattcacatcggcggc
gaccacctggccatcgtggatgagccctacgtcgcgaaggtcgcagccgacctggcccgc
cgcatggcagatatcagtaccgagaagtga
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