Gordonia sihwensis: P5P27_20075
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Entry
P5P27_20075 CDS
T08972
Symbol
pks13
Name
(GenBank) polyketide synthase Pks13
KO
K12437
polyketide synthase 13
Organism
gsi
Gordonia sihwensis
Brite
KEGG Orthology (KO) [BR:
gsi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gsi01004
]
P5P27_20075 (pks13)
Lipid biosynthesis proteins [BR:
gsi01004
]
Polyketide synthase
Modular PKS
P5P27_20075 (pks13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
Acyl_transf_1
Ketoacyl-synt_C
PP-binding
Thioesterase
KAsynt_C_assoc
Thiolase_N
Lipase_3
Motif
Other DBs
NCBI-ProteinID:
WFN92999
LinkDB
All DBs
Position
4229141..4234510
Genome browser
AA seq
1789 aa
AA seq
DB search
MSETENTAPSDSTAPSDTTGPTERTGPSESTESPAGRAVSNGETVGDLTVDELRDWLRNW
VSRATGVAVEQISDDRPMEEFGLASRDAVALAADVEDFTGVILTATAAYNHPTIASLAKR
IIEGDPDEGLDVEADRFWERERSADDDIAIVGLATRFPKAGTTPESTWEALISGVDGITD
LPDDRWLEFKADPRLAEAIEKGNVRGGYLDDVTGFDADFFQMSPREVENVDPQQRLALEL
TWEALEHAHIPPSDLRGGQVGVFMGTSTNDYQLLATLGLGEGASETAAYALTGTATSIIA
NRVSYFFDFHGPSLAIDTACSSSLVAVHEGVRSLRNGDSDVVIAGGVNMLITPAATLGFD
QIGAQAPDGRIKAFSSDANGMIRAEGGGVFVLKRMADARRDGDTVLAVIAGSAVNSDGRS
NGIFAPNPEAQVEVLRSAYADAAIDPRTVDYVEAHGTGTVLGDPIEADALGRVVGRGRSG
DAPMLLGSAKTNFGHMESAAGAGALAKVVLSLQNDRLPASLNYAGPNPYIQFEATNLRVI
TEPTEWPRYSGHAVSGVSGFGFGGTNAHVVVREVLPSDFEDRAASPADADAAAGVPVPDD
LDDDDFLTEAERAVLAAQAKREPVAAEAPEADPAEGFAPAAVPGAVVPLVISGFLASRRR
KAAAELVEWLESDEGRQTPLAEIGRALAHRNHGRTRSVVMARTYEDAVKGMRAVAEGKSL
PFVYTCDSPDAASAVWLLSGFGSQHRKMAKQLYTENPVFAKYADRVDAYIQRELGYSMVE
IFLDDARTYEIETAQIGIYTIQVALADTMRHYGAEPGVLVPHSMGEASAAYISGGLSLED
ATRVICQRSRLMGEGEAMLTGDAVRFMALVEYSAEEINDVLVDYPDLEICVYAAPTHTVI
GGPGPQVDAIVARAEAEGKLGRKLQTKGASHTSQMDPLLGELSYEITGIEPQPLKYGVYS
SVDRETFYRPGTPDVFTIDYYLKGLRHSVWFAQAIAKSVEAGHRTFVELSPNPAVLISVA
ATTFGAGVHDAELIETLRRKEDESYGLVNALMKLYVHGHPVDVAALFGTGPDQRFANIPR
TRFERKPYWIDAVISGGSGAGSVPGAHVALPDGRHAWEVNAAAVTDPRELVLAAAKQVLG
SGAAVAAVESLGDFPTDGTVTTTLTGHPGGAAISVHAGPQGGFALLYQAAVTGGTVREPV
PSATGADAQTPAEAAKASGFVDEKVVVEDEVVDVIGDRWSPDSGESVGDRLAVIVGESMG
YDPEDLPREIPLIELGLDSLMAVRIKNRVEYEFEIPQLQLQAMRQADLSDVEKFVAFAVT
HRDQLDDLEKATGGGELDTAALNAYIDAELAKDALKGQAPDAPEPAEQVEPVEPTTSASE
ESSRSQVTEAPKMAETATDTPPAQAPTITDQASVAEASGTDVPPRDAAERLTYGAYAVVT
GKSAGGVFNKLPVLDDETAEKLTERLNERTGGEIDVEDVLDSETIEELSNYVRQHMEASA
DIDGFVRFLRVPKNSDGTPKHTFDTAAGDPTPMLVFHPAGGNTSAYEALLKRLPDDQPVI
GFDRVEGTIEERVRQYMPRLREVQPHGPYVLVGWSLGGALAYGAAQLLREEGEEIAFVGL
IDVVRPTRDVPDTPENKRARLERWKAFAIKTYGLDEDVPIPMDRLVAADDNEQFAIITEM
MSMSGTKIPGGIIEHQRTSFLDNRALTEIDPTPYDGKVVLYRADKMHDGAIELEPQWAEI
DEDGRWGEVVDDLEIIHIGGDHLAIVDEPYVAKVAADLARRMADISTEK
NT seq
5370 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaactgagaacaccgcgccgtctgacagcactgcgccctccgacaccactggg
cccaccgagcgcaccgggccctccgagagcactgagtccccggccggccgcgccgtctcg
aacggcgagaccgtcggcgacctgaccgtcgacgaactgcgcgactggctccgcaactgg
gtgtcgcgggccacgggtgtggccgtcgagcagatctccgacgaccgcccgatggaggag
ttcggactggcctcgcgggacgccgtcgcgctcgcggccgacgtcgaggacttcaccggg
gtcatcctcaccgcgaccgccgcgtacaaccacccgacgatcgcgtcgctggccaagcgg
atcatcgaaggcgatcccgacgagggactcgacgtcgaggccgaccggttctgggagcgt
gagcgatcggccgacgacgatatcgccatcgtcggcctggccacccggttccccaaggcg
ggcaccaccccggagtcgacctgggaggcgctgatcagcggcgtcgacggcatcaccgat
ctgccggacgaccggtggctcgagttcaaggccgacccgcgactggccgaggccatcgag
aagggcaacgtccgcggcggctacctggacgacgtgacgggcttcgacgccgacttcttc
cagatgagcccgcgcgaggtggagaacgtcgacccgcagcagcggctcgcactggagctg
acgtgggaggcgctggagcacgcgcacatcccgccgagtgacctgcgcggtggccaggtg
ggcgtcttcatgggcacctcgaccaacgactaccagttgctggcgaccctcgggctcggc
gaaggcgcatcggagacggccgcgtacgcgctgaccggtacggcgacgtcgatcatcgcg
aaccgagtgtcgtacttcttcgacttccacggcccgtcgctcgccatcgacacggcgtgc
tcgtcgtcgctggtcgccgttcacgagggcgtgcgcagcctgcggaacggtgattcggat
gtcgtcatcgccggcggcgtcaacatgctcatcaccccggccgcgacgctcggcttcgac
cagatcggcgcacaggcgccggacggtcggatcaaggccttctcctcggacgccaacggc
atgatccgcgccgagggcggcggcgtcttcgtcctcaagcggatggccgacgcccgccgc
gacggcgacaccgttctcgcggtgatcgccggttccgcggtcaactccgacggacgctcg
aacggcatcttcgcgccgaatcccgaagcccaggtggaggtgctgcgctcggcgtacgcc
gacgccgccatcgacccgcgcaccgtcgactacgtcgaggcgcacggcaccggaaccgtg
ctcggcgacccgatcgaggccgatgcgctcggccgcgtggtcggtcgcggccgcagcggc
gacgcgccgatgctgctcggctcggccaagaccaacttcggtcacatggagtcggcggcg
ggcgccggtgcgctcgccaaggtggtgctctcgcttcagaacgacagactccccgcttcg
ctgaactacgcgggacccaacccgtacatccagttcgaggccactaacctccgggtgatc
accgaaccgaccgagtggccgcggtactccgggcacgccgtctccggtgtctccggattc
ggtttcggcggaaccaacgcgcacgtcgtggtccgcgaggtgctgccgtccgacttcgaa
gaccgcgcggcctcgcccgccgacgccgacgccgccgccggggtcccggtgcccgacgat
ctcgacgacgacgacttcctcaccgaggccgagcgggcggtgctcgcggctcaggccaag
cgtgagccggtggccgcggaggcacccgaggccgatccggcggagggcttcgcgccggcc
gccgtccccggcgctgtagtgcccctggtgatctccggttttctggcctcacgccggcgc
aaggccgccgcggagctggtcgagtggctggagtcggacgagggcaggcagacgccgctg
gcggagatcggccgtgccctggctcaccgcaaccacggccgcacgcgctcggtggtgatg
gctcgtacgtacgaggacgcggtcaagggcatgcgcgcggtcgccgaaggtaagtcgctg
cccttcgtctacacctgcgactctcccgacgccgcgtccgcggtgtggttgctttccggt
ttcggctcgcagcatcgcaagatggccaagcagctgtacaccgagaacccggtgttcgcg
aagtacgccgaccgcgtcgacgcctacatccagcgggagctggggtattcgatggtcgag
atcttcctcgacgatgcgcggacgtacgagatcgagaccgcgcagatcggcatctacacg
atccaggtggcgctggccgacacgatgcgccactacggcgccgagcccggcgtccttgtt
ccgcactcgatgggcgaggcgtcggctgcctacatcagcggcggactgtcgctggaggac
gccacgcgggtgatctgccagcgttcgcgcttgatgggcgagggcgaggcgatgctgacc
ggcgacgcggtgcgcttcatggcgttggtcgagtacagcgcggaagaaatcaacgacgtc
ctcgtggactacccggacctcgagatctgcgtctacgcggctcccacgcacacggtgatc
ggcggtccgggaccgcaggtggacgcgatcgtggcgcgtgccgaggccgagggcaagctg
ggccgcaagctgcagaccaagggcgcgagccacacctcgcagatggacccgctgctcggt
gaactctcctacgagatcaccggcatcgagccgcagccgttgaagtacggcgtctacagc
tcggtggaccgcgagaccttctaccgtccgggcacccccgacgtgttcacgatcgactac
tacctcaagggcctgcgccacagtgtgtggttcgcccaggcgatcgcgaagtcggtggag
gccgggcaccgcacgttcgtcgaactctcgccgaatcccgccgtcctgatctcggtggcc
gccaccacgttcggcgccggggtgcacgacgcggagctgatcgagacgctgcgccgcaag
gaggacgagagctacgggctcgtcaacgcgctgatgaagctgtacgtccacgggcatccg
gtggatgtggcggctctgttcggcactggaccggatcagcggttcgcgaacattccgcga
acgcggttcgagcgcaagccgtattggatcgatgcagtgatctccggtggctcgggtgcc
ggttcggtgccgggcgcgcacgtcgcgctgcccgacggcaggcacgcctgggaggtcaac
gccgcggcggtcaccgatccgcgggagctggtgctcgccgcggcgaagcaggtgctcggt
tccggcgccgcggtggcggcagtcgagtctctcggtgatttcccgaccgacggcacggtc
acgaccacgctcaccggccacccgggtggcgcggcgatcagtgtgcacgccggtccgcag
ggcggattcgcgctgctctaccaggccgcggtgaccggcggcacggtgcgcgagccggtg
ccgtccgcgaccggcgcggacgcgcagacgcctgccgaggccgcgaaggcctccggcttc
gtcgacgagaaggtggtcgtcgaggacgaggtcgtcgacgtgatcggcgaccggtggagc
ccggactcgggagagagcgtgggcgaccgcctcgcggtcatcgtcggtgagtcgatgggc
tacgaccccgaggacctgccgcgggagatccccctcatcgaactgggcctcgactccctg
atggcggttcgcatcaagaaccgcgtcgagtacgagttcgagatcccgcagctgcagctg
caggcgatgcgacaggctgatctgtcggacgtcgagaagttcgtcgccttcgcggtcacc
caccgcgatcagctcgacgacctggagaaggccaccggcggcggagaactcgacaccgcc
gcgctgaacgcctacatcgatgcggaactggccaaggatgctttgaagggacaggcgccc
gatgcgccggagcctgcagagcaggtcgagcccgttgagccgacgacgagcgcgagcgag
gagtcgagtcggagccaggtgaccgaagcgcccaagatggccgagaccgccaccgacacc
ccgcccgcacaggctcccaccatcaccgaccaggcgtcggttgcggaggcctcgggcacc
gatgtgccgccgcgcgatgctgccgaacgcctgacctacggtgcgtacgcggtggtgacc
ggcaagtcggccggtggcgtcttcaacaagctgccggtgctcgacgacgagaccgcggag
aagctcaccgagcggctgaacgagcgcaccggaggcgagatcgacgtcgaggacgtcctc
gattcggagacgatcgaggagctctcgaactacgtccgtcagcacatggaggcgtctgcc
gacatcgacggcttcgtgcggttcctgcgtgtcccgaagaattccgacggcacgccgaag
cacacgttcgacaccgccgcgggcgacccgacgccgatgctggtgttccaccccgcgggc
ggcaacacctcggcctacgaggcactgctcaagcggctgccggacgaccagccggtgatc
ggcttcgaccgagtcgagggcaccatcgaagagcgggtacggcagtacatgccgcgcctg
cgcgaggtgcagccgcacggtccgtatgtgctggtgggctggtctctgggcggggcgctg
gcctacggcgccgcacagctgctccgcgaggagggcgaggagatcgccttcgtcggactg
atcgacgtggtgcgcccgacccgggacgtgcccgacaccccggagaacaagcgagcgcgg
ctggagcgttggaaggcgttcgcgatcaagacctacgggctcgacgaggacgtgccgatc
ccgatggaccggctcgtcgccgccgacgacaacgagcagttcgcgatcatcaccgagatg
atgtcgatgtcggggaccaagattccgggcgggatcatcgagcatcagcggacgtcgttc
ctcgacaaccgtgcgctcaccgagatcgatcccactccgtacgacggcaaggtggtgctc
taccgcgcggacaagatgcacgacggagccatcgaactcgagccgcagtgggccgagatc
gatgaggacgggcgctggggcgaggtggtggacgatctggagatcattcacatcggcggc
gaccacctggccatcgtggatgagccctacgtcgcgaaggtcgcagccgacctggcccgc
cgcatggcagatatcagtaccgagaagtga
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