Glycine soja (wild soybean): 114366835
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Entry
114366835 CDS
T06057
Name
(RefSeq) protein RDM16-like isoform X1
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114366835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114366835
Spliceosome [BR:
gsj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
114366835
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Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
SabA_adhesion
Motif
Other DBs
NCBI-GeneID:
114366835
NCBI-ProteinID:
XP_028179644
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Position
1:complement(56232615..56237995)
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AA seq
832 aa
AA seq
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MDDRVKSEKRSRDRHLERDDKYHRDSDDHRRHRSDRNHKRDHKSRDRDRTYDREGSRDRD
YEREGSNIRLKVNRDEGREDLVEPRLSSHSHKRKEREHSEDRDYEDKKIRVSEERKEGRR
ERRKFGDKVKKEEEEEDGNDNIRGIHEAKVKEEVADGAHGSASSNDTAFIQNGALGSPAV
APMSVPETSLAPPSCFPIKVSSNSTTNENKGVSIIRSHEVTGKSSTDGSSSAAGKTGSLS
IDALAKAKKALQMQKELSEKLKKIPQLNKSSSQNSQGSSNLGSMNESAVPSSAAGVALKS
STSASLGHVANMSMFPSTAFAASANTPVIGTSAVGIPNATLPNLEAVRRAQELAARMGFR
QDPQFAPLINMFPGQMVTDVALLQKPTKAPVLRLDAQGREIDEQGNVINVTKPINLSTLK
VNINKQKKEAFEILQPVLDVDPESNPHFDASMGINKTKLLRPKRMNFQFVEEGKWSKDAE
TIKLKSKFGEAQAKEHKAKQAQLAKAKAAPDINPNLIEITERVVIKEKPKDQIPEIEWWD
VPLLHSGNYGDVDNGIIGEDKLKIEKINFYVEHPRPIEPPAEPAPPPPQPLKLTKQEQKK
LRTQRRIAKEKERQEMIRQGVIEPPKPKVKISNLMKVLGSEATQDPTRLEKEIRTAAAER
EQAHIDRNIARKLTPAELREKKERKLFDDPNTLETLVSLYRINDLSHPKARFRVDVNAQE
NRLTGCAVICDGISVVVVEGGSKSIKRYGKLMLRRINWSEVSKEKEENEDSDDDKPANKC
VLVWQGSVAKPSFYRFSVHDCITEAAARKVFVDAGVPHYWDQAVNYKEDEAV
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagagtcaaatctgaaaagagaagcagagatcgacacttggaacgtgacgac
aaataccatcgcgattctgatgatcaccgccgtcatcgatcagacaggaatcacaagcgt
gaccacaaatcaagggatagggataggacttatgacagagaaggaagcagggatagggat
tacgaaagagagggtagcaatattaggttgaaggtgaaccgtgatgaggggagggaagat
ttggtggagccacgactctcctcacattctcataagcggaaagagagggagcacagtgag
gacagggactatgaggataagaaaattagggtttctgaggagaggaaggaagggaggagg
gaacggaggaaatttggggataaagtcaagaaggaggaagaagaagaagatggtaatgat
aatattagaggcattcatgaggccaaggtcaaggaggaagtcgctgatggtgcccatggc
tcagcttcttccaatgacactgcgtttatccaaaatggtgccttgggatcacctgctgtg
gcgcccatgagtgtgcctgagacatctttggctcctccttcttgctttcctatcaaggta
tcttcgaattctaccacaaatgaaaataagggcgttagtattatcaggtctcatgaggtt
actggaaaatctagtacagatgggtcatcttcagctgctggaaaaactgggagcctctct
attgatgccctagctaaggctaagaaagctttacaaatgcagaaagagttgtcagaaaag
ctaaagaaaattcctcagttgaataagagttctagccaaaattcacaaggaagctcgaac
ttgggttcaatgaatgaatctgcagtaccctcttctgctgctggagtggcattaaaaagt
tccacctcagcttctttgggccatgttgcaaatatgtcaatgttcccctcaactgctttt
gctgcttctgctaatactccagtaattggcactagtgctgttggtattccaaatgcaact
ctgcccaacttggaagctgtcaggcgtgctcaggagcttgctgccaggatgggatttcgt
caagatccacaatttgctcctctgataaatatgtttcctggtcagatggtaacagatgtt
gctctcctgcagaaacccacaaaagcccctgttcttcgtcttgatgctcagggacgggaa
atagatgagcagggaaatgttattaatgtgactaagcccatcaaccttagcacattaaag
gtcaacattaacaaacaaaagaaagaagcatttgaaatactacagcctgtattggatgtc
gatcctgaatctaatcctcattttgatgcaagcatgggtatcaacaaaacaaagctcctg
cggcccaagaggatgaatttccaatttgtagaggaaggaaaatggtcaaaagatgctgaa
acaataaaattgaagagtaaatttggagaagctcaagcaaaagagcacaaggccaaacaa
gcacagttggcaaaggcaaaggctgctcctgatataaatcctaacttaatagaaataaca
gagagagttgtaattaaagaaaagcccaaggaccaaattccagagattgagtggtgggat
gtgcctcttctgcattctggaaattatggtgatgttgataatggaatcataggcgaagat
aaactgaaaatagaaaaaatcaatttttatgtggagcatcctcgtccaattgagccacct
gctgagcctgctcccccacctcctcaaccactcaagctaactaagcaagagcagaagaaa
ctccggacgcaaagacgtatagctaaggagaaagagcgacaggagatgataagacagggt
gtcatagaaccaccaaaaccaaaggtcaagattagcaatttaatgaaagtacttggctct
gaagcaactcaagatcctactcggctcgaaaaagaaatacgtaccgcagctgcagagcgt
gagcaggctcacatagataggaacattgcacgcaagcttactcctgccgagctgcgggag
aagaaggagaggaagctgtttgatgacccaaatacactggagacacttgtctctctttac
aggataaatgacctctcacatccgaaggcccgattcagagttgatgttaatgctcaagag
aaccgtttgactggatgtgctgtgatttgtgatggtattagtgttgttgttgttgaaggt
ggaagcaagtcaattaagaggtatgggaaacttatgcttagacgtattaattggagtgaa
gtttcaaaagagaaagaagaaaatgaagattcagatgatgacaagcctgccaataagtgt
gttctggtgtggcaaggaagtgttgccaaacccagcttctataggttcagtgtccatgat
tgcatcaccgaagcagctgcccgaaaagtttttgtggatgctggtgttcctcattattgg
gaccaagccgtgaactacaaagaagatgaagctgtttaa
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