Glycine soja (wild soybean): 114366961
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Entry
114366961 CDS
T06057
Name
(RefSeq) DNA mismatch repair protein MSH7-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
114366961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gsj03400
]
114366961
DNA repair and recombination proteins [BR:
gsj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
114366961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
Motif
Other DBs
NCBI-GeneID:
114366961
NCBI-ProteinID:
XP_028179823
LinkDB
All DBs
Position
9:complement(39824741..39833293)
Genome browser
AA seq
1079 aa
AA seq
DB search
MLRYFHRISGDRPATAPKVQQPNHNVTAAVNQPPPADDVRGTDTPPEKVPRRVLPANFAP
NENNSGPSLFESIMHKFVKVDDNERVIQRSHSLNGSLAKSSLPVGICADTDRKVVNMEET
AFQPLGKVKDNAVNFKEKANQENFALVETDDDVTGPETPGMLPLASHLKRSREDGSKFGS
LLNSGKRVRFLDDSLELDMTKKEAEVASKFEWLNPSRIRDANGRRSNDPLYDRTTLYIPP
EALGKMSASQKQYWSVKCKYMDVLLFFKVGKFYELYEMDADIGHKELDWKITLSGVGKCR
QVGISESGIDDAVQKLVACGYKVGRVEQLETSEEAKARGANSVIRRKLVQVVTPSTNVDG
NIGPDAVHLLSIKEENNGLDNGAVMYGFAFVDCARLRFWVGSIDDDASCSALGALLMQVS
PTEVIYDNRGLSKEAQKALRKFSLNGSTALQFTPVQSMTDLVSNEIRDLIHSKGYFKGSS
HSLDHVLRSVIHREITLSALVGLIDHLDRLMLNDALQNGDLYTYQVYRGCLKMDGPTMIN
LELFVNNEDGGKSGSLYNCLDKCVTSSGKRLLRNWICCPLVDAEIINNRLDIVDDLMANP
EIVSHIAQHLRRLPDLEHLLGRIKSSLQLSGPLLLPFLGKKILKQRVKVFGSLVKGLRTA
LSLLLLLQKEQPLISSLTKVFKLPILTGSNGLDQFLAQFEAAVDSDFPNYQNHNVTDSDA
ETLTILAELFLEKAAQWFEVVHAINCIDVLRSFAVTSTFSRGTMSRPVIVASKGTSKDNG
GTVLKMKGLWHPFALGDSGCLPVPNDVILGENEDGSHPRTLLLTGPNMGGKSTLLRSTCL
AVIMAQLGCYVPCESCVLSAVDIIFTRLGAKDRIMTGESTFFVECTETALVLQNATQDSL
VILDELGRGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHSLTKEFASHPRVIMQHMAC
AFKSKSDTHSMRDQELVFLYRLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMKKSI
GQSFRSSEQRSEFSTLHEEWLKTLVSISRIEDCNSLDEDALDTLICLWYELKTSFISGK
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgcttagatattttcaccgaatttccggcgaccggccagccaccgctccgaaggttcag
caacccaatcacaacgtcactgccgccgtcaaccaaccgccgccggcagatgatgtcaga
ggaaccgacacgccgccggagaaggtgccgcggcgcgttttaccggcaaatttcgcgcca
aacgagaacaactctggtccctccctgtttgagagcatcatgcacaaattcgtcaaggtc
gatgacaacgaaagagttattcagaggagccactcattgaatggtagtttggctaaatct
tctttaccagtgggaatatgtgctgatactgatcgtaaagtggtgaacatggaagagaca
gcttttcaacctttagggaaagtgaaagataatgctgtgaatttcaaggaaaaggctaat
caggagaactttgcactggttgaaactgatgatgatgttactggaccagaaaccccaggg
atgctgcctcttgcttctcacctgaagcgaagtcgagaggatggatccaagtttggttcg
ttgctgaattctggcaaacgagttagatttctcgacgattcactggaattggacatgact
aagaaggaagcagaagtggctagcaagtttgaatggctcaatccttctcgaatcagggat
gctaatggaagaaggtcaaatgatcctttgtatgataggacaacgctttatattcctcca
gaagctttggggaaaatgtcagcatcacagaaacagtattggagtgtcaaatgtaaatat
atggatgttttgcttttttttaaagtgggaaaattttatgagctttatgaaatggatgct
gacattggccataaggagcttgattggaaaataacgttaagtggtgttggaaaatgtcgg
caggttggtatatctgaaagtgggattgatgatgctgttcaaaagctggttgcatgtggg
tataaggttggacgagtggagcaattagagacatctgaagaagcaaaagctagaggagct
aactctgttattcggagaaaattagttcaggtagtcactccatcaaccaatgtggatggt
aatattggtcctgatgctgttcaccttctctcaataaaagaggaaaacaatggcttggat
aatggtgcagttatgtatggatttgcttttgttgattgtgctcggcttagattttgggtt
ggctctatagacgatgatgcatcctgttctgctttgggggctttattgatgcaagtgtca
cccacggaagttatatatgataatagaggtttatccaaagaagctcagaaagcacttaga
aaattctcgttgaatggttcgacggcactacagttcactccagttcagtcgatgactgac
ttggtgagcaatgaaattagggatttaattcactcaaagggatacttcaaaggctcgtct
cattcactggatcatgtactgagaagtgtgattcatcgtgaaatcaccttgtctgctcta
gttgggctgattgatcatctggatagattgatgttgaatgatgccctacagaatggggat
ttatatacataccaagtttacaggggttgccttaaaatggatggtccaacaatgataaat
ctagaactttttgtcaataatgaggatggtggcaaatcaggttcattgtacaattgtctt
gataagtgtgtaacttcatctggaaagcggcttcttaggaactggatctgctgtccatta
gtagatgctgaaataattaacaacaggcttgatatagtggatgatctaatggctaaccca
gagattgtgtcacatattgctcaacatcttcgcaggcttccagacttggaacatttgctt
ggccgaattaagtccagccttcaattatcaggccctctcttattgcccttcttgggaaag
aaaatattgaagcagagggtgaaagtgtttggatcacttgtgaaaggccttcggactgct
ttgagcttgttgcttcttctacagaaagagcagcctctaatatcgtctttgaccaaagtt
tttaaacttccaattctgactggcagtaacgggctcgaccaatttcttgctcagtttgaa
gcagcagtagacagcgacttcccaaattaccagaatcacaacgttacggattcagatgct
gaaacactcacaatacttgctgaattatttttggagaaagctgctcagtggtttgaagtt
gttcatgccatcaattgcattgatgtattaagatcttttgctgttacttctaccttttct
cgtggaactatgtctaggccagtcatagtggcatcaaaaggtacaagtaaagacaatgga
ggaactgtgctcaagatgaagggactatggcatccatttgcccttggagacagtggatgt
ttgcctgtccccaatgatgtaatccttggtgagaatgaagatgggtcgcatcctcgaact
ttgctgcttactggaccaaacatgggtggaaagtcaacacttctgcgttccacctgtcta
gctgttattatggcccagctaggctgttatgtaccatgtgaaagttgtgttctctcagct
gtggatatcatcttcacacgacttggagccaaagatagaatcatgacaggcgagagtacc
ttctttgttgagtgtactgaaacggccttggtgcttcagaatgctactcaagattctctt
gttatccttgatgaattgggtcggggaacaagcacttttgatggctatgccattgcatat
gcagtattccggcatctgattgaaaaagttaactgtcgcatgctatttgccacacactac
cattcactcacgaaagagtttgcttcccatccacgcgtcataatgcaacatatggcttgc
gctttcaagtcaaaatctgatacccattccatgcgtgatcaggaactagttttcctatat
cggcttgcctccggaccatgtccagagagctacgggttgcaggtagccctcatggctgga
atcccagaaaaaacggtaaacattgcttctaaggcaagccaacagatgaaaaaatcaatt
ggacaaagttttaggtcaagcgaacagagatcagagttctcaacccttcatgaagaatgg
ttgaagaccttggtatctatctcaagaatagaggattgtaactctttggatgaagatgct
ttagatacattaatttgtctgtggtatgaacttaaaacttcatttatatcaggcaagtag
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