Glycine soja (wild soybean): 114366996
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Entry
114366996 CDS
T06057
Name
(RefSeq) transcription initiation factor IIF subunit alpha-like
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114366996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gsj03021
]
114366996
Transcription machinery [BR:
gsj03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
114366996
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
WHD_SOWAH
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
114366996
NCBI-ProteinID:
XP_028179855
LinkDB
All DBs
Position
9:complement(747028..752915)
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AA seq
536 aa
AA seq
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MSTDLQLKSSCSGCGSTTDLYGSNCKHMTLCLGCGKTMAAKRAKCVDCGATLTRLIREYN
VRASSPNDKNYFIGRFINGLPDFSKKKSAENKWSLQKDGLHGRQITDTLREKYKNKPWLL
EDETGQSQFQGHLEGSQSATYYLLMKERKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKM
KNRKKTADGYQRWMMKAANNGPAAFGEHGKFDDNESNTGGGRSHKKTDEDDEGHVSDKGE
EDEEEESERKSRLGLNKRAGEDDEEGPRGGDHDLDDDDVEKGDDWEHEEIFTDDDEAVGN
DPEEREDLAPEVPAPPEIKQDEEEEDEDNEEGEGLSKSGKELKKLLGKASGLNESDAEDD
DDDDDDVDDDVGVPPVIATKQKDALKEEPIDNSPSKPTATGPARGTPSSKSSKGKRKLNE
ETKPSNTATPKKEPKLSAKDVNGSASKSSAPPKGTPPLSSKGGSSTTTTASGPVSEEEIR
AVLRQKTPVTTQDLVAKFKARLRCSEDKQAFAEILKRISKIQKTTTGASYVILRDK
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccgacctgcaattgaagtcgagttgtagcggatgcggatcaacgacggatctc
tacggaagcaattgcaagcacatgactctgtgcttgggctgcggcaaaaccatggcggcc
aaacgcgccaaatgcgttgattgtggcgccaccctcactcgtttgattcgagaatataat
gttcgtgcaagttcccccaatgataagaattacttcattggaaggttcataaacggtttg
cctgatttttcgaagaagaaaagtgctgagaacaagtggtctctgcagaaggatggacta
cacggacgccaaattactgatactttgcgggagaagtacaagaacaagccttggctcttg
gaggatgaaacaggtcagtcccagttccagggtcatctagaaggttcacaatcggctaca
tattacctgctaatgaaggaaaggaaggagtttgttgccattcctgctggttcttggtac
aactttaacaaggttgctcaatataagcaattgacattggaggaagcagaagagaagatg
aagaatagaaagaaaactgcagatggatatcaaagatggatgatgaaagcagcaaataat
ggcccagctgcatttggtgaacatgggaaatttgatgacaacgaaagcaacacgggtgga
gggagaagccataaaaaaactgatgaggatgatgaaggtcatgtgtctgataagggagag
gaggatgaagaggaggaatcagaaaggaagagtagacttggacttaataaaagagctggt
gaagatgatgaagaaggtccaaggggaggggaccatgatctagatgacgacgatgttgag
aagggcgatgattgggagcatgaagagattttcactgatgatgatgaagctgttggcaat
gatcctgaggaaagggaggatttggctcctgaagttcctgctcctcctgaaatcaagcag
gatgaggaggaggaagatgaagataatgaagagggagaaggtctgagtaaatctgggaaa
gagctgaagaagctgcttggaaaagctagtggtctgaatgaatctgatgcagaggatgat
gatgacgatgacgatgatgtggatgatgatgttggtgtccctcctgtcattgctacaaag
caaaaggatgcccttaaggaagaacccattgacaatagcccttcaaagccaacagcaaca
ggacctgctcgtggaacaccttcttcaaagtcttcaaaggggaagagaaaattaaatgaa
gaaacaaagccatctaataccgcaactccaaagaaggaaccaaaattgtccgccaaagat
gtaaatggatctgcatctaaaagtagtgcacctccaaaaggtacacctccattgtcatca
aagggcgggtcttccacaacaacaacagcttctggaccggtgagtgaggaagaaattagg
gctgttttaaggcagaagactccggtgaccactcaggatcttgtagctaaatttaaggca
agactaagatgttcagaggataagcaagcatttgctgagatccttaagcgaatctctaag
atacagaagactacaactggagccagttatgttatcctgagagataagtga
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