Glycine soja (wild soybean): 114367247
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Entry
114367247 CDS
T06057
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 14-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114367247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
gsj03041
]
114367247
03009 Ribosome biogenesis [BR:
gsj03009
]
114367247
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114367247
Spliceosome [BR:
gsj03041
]
Complex A
U1 snRNP components
U1 related factors
114367247
Complex B
114367247
Ribosome biogenesis [BR:
gsj03009
]
Eukaryotic type
Pre-60S particles
Helicases
114367247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
WW
Motif
Other DBs
NCBI-GeneID:
114367247
NCBI-ProteinID:
XP_028180195
LinkDB
All DBs
Position
9:2523157..2530249
Genome browser
AA seq
1166 aa
AA seq
DB search
MATAEAASTGLGPRYAPDDPTLPQPWKGLIDGSTGLLYYWNPETNVTQYEKPTPPVPAPV
ASAPSLAPIPAAHTMQPGGMMQQHGQQMLQVQSSQQHLAQQHGQSMLPQQQQQQQQSPHI
THVTQQQSSQGAQAAQQQNHHGQQMMQQPQGHQARQPMMQPQGQQMHHQMPPQAIHSQHF
GQGMPQDQGSHIVQPQAHQFTSQNMHYMSYQQNVITSRQPNSQHIQPNMVSPGQPNSQQV
QHNMHGQPFENQQTTYPKVEVAEFKNGSQVGHSLSHYPQRSALPVQNNQNNPAEVGSGQV
PNVGVNAGQPQQFRALSGSMQQSPSGSDLYYQHGPNFHSQMSPGMMHGHPSNVHPAGQKM
GHEDNLHGRAGNEYDYNSTKDMSTMGCQQPDITPIPIPRNQQDMRIGNAPFQNVMPSGNG
SGIAGNAVPSMFVPPIGGPSPLSTNPSMRPPYMGSSDATDLSPAEIYCQQHEVTATGDNI
PPPFMTFDATGFPPEILREIYSAGFSSPTPIQAQTWPVALQGRDIVAIAKTGSGKTLGYL
MPAFILLRQRRNNSLNGPTVLVLAPTRELATQIQDEVIKFGRSSRVSCTCLYGGAPKALQ
LKELDRGADIVVATPGRLNDILEMKKIDFGQVSLLVLDEADRMLDMGFEPQIRKIVNEIP
PRRQTLMYTATWPKEVRKIASDLLVNPVQVNIGNVDELAANKAITQYVEVVPQMEKQRRL
EQILRSQERGSKVIIFCSTKRLCDQLARSIGRTFGAAAIHGDKSQGERDWVLGQFRTGKS
PILVATDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVSYTFFSEQDWKH
AGDLIKVLEGANQHVLPELRQMALRGPSNFGKDRGGMSRFDSGGGGGGRWDTGGRGGFGG
RGGGMRDGSFGGRGSGFGGRGGGIRDGGFGGRGGGFGGRGGMRDGGSGQGGRGDFFPGRG
NRGRGSGGPRGGHVGWGRGERGMDDRYNMEGRGQGRGRGRFDNRRDVSSKGRGRSHSRSP
ERVRTWDYSKSSSRSRSRSRSRSWSRGRSRSRSWSRGRSRSYSRSISPRRSRSRSRGRSY
SRSRSRSPSYDRRDRSDQQLPDQKDIRAHEVGTSDPRMLPVSSGLGTQGNSFLGTEQVEQ
QPIVSSTDPGNPEAVADLSHQSVSDI
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggcggaggcagcttctactgggcttggtcccagatatgcacctgatgaccct
acccttcctcaaccgtggaaggggttgattgatggcagcactggtcttttatactattgg
aatcctgaaaccaatgttacacaatacgaaaaaccgacgccacctgtgcctgcgcctgtg
gcttctgcgccgagcttggcacctataccagcggctcatacaatgcagcctggcgggatg
atgcagcagcacgggcagcagatgctgcaagtacaatcctcgcaacagcatcttgcccaa
cagcatggccaatcgatgctgccacagcagcagcagcagcagcagcagagtccccatatc
acacatgttactcagcagcagtcctctcagggtgctcaggcagcacagcagcagaaccat
cacgggcagcaaatgatgcagcagcctcaaggacatcaagccaggcagccaatgatgcaa
ccgcaaggacagcaaatgcatcatcagatgccgccgcaggcgatccattcccagcatttt
gggcaaggaatgcctcaggatcagggctctcatattgtacaaccacaagcacatcaattc
acttcccaaaacatgcattacatgtcgtatcagcaaaatgtgattacatccaggcaacca
aactcccagcacattcagccaaacatggtatcacccgggcaacctaactctcagcaggtt
cagcataacatgcatggtcagccctttgaaaaccaacaaactacatatccaaaggtagag
gtagcggagtttaaaaatggaagccaggttggacattcgctgtctcattatccacaaagg
agtgccttgcccgttcagaacaaccagaacaatcctgctgaagttggttctggtcaagtg
cctaatgtaggtgtcaatgctggccaaccacagcaattcagggccttatctggcagtatg
caacagtcaccctctggatctgatttatattaccaacatggtcctaactttcatagccag
atgagcccaggcatgatgcatggtcatccatccaatgtccaccctgctggccaaaagatg
ggtcacgaggataatttacatggtagagcagggaatgagtatgactataattctaccaaa
gatatgtcaacaatgggttgtcagcagccagatataactccaataccgattccaagaaat
cagcaggatatgaggattggcaatgctccttttcaaaatgtaatgccaagtggaaatgga
agtggtattgctgggaatgccgtgcctagcatgtttgttcctccaataggaggaccttca
cctctctctactaacccttcaatgaggcctccttatatgggttcttcagatgctactgat
ctctcaccggctgaaatttactgtcagcaacatgaagttacagctacgggtgacaacatt
ccacctcctttcatgacatttgacgctacagggttccctccagagatattgagagagata
tattctgctggtttctcaagtccaacaccaatacaggctcaaacatggcctgttgcacta
caaggtagagacatagtcgcaattgccaaaacaggctctgggaaaacattaggctactta
atgcctgccttcattcttcttagacagcgacgtaataattctctgaatggccccactgtc
ttggttttggctccaacacgtgaacttgcgacacagatccaagatgaggtcatcaaattt
ggccgatcatcgcgagtctcttgcacgtgcttatacggtggagcacctaaagcccttcaa
ctaaaagagttagaccggggagcagacattgttgttgccacacctggtcggctcaacgat
atacttgaaatgaagaaaattgactttgggcaagtttcactccttgtgcttgatgaggct
gaccgaatgcttgacatgggttttgagcctcaaattcgtaagattgtgaatgagattcca
cctcgcagacaaactctcatgtacacggcaacctggccaaaagaagtaagaaaaattgct
agtgatcttcttgttaatcctgtccaggttaacattggaaatgtggatgagcttgctgca
aataaagctataacacagtatgttgaagttgtcccacaaatggagaaacagaggcgtttg
gagcagattctcagatcccaagaacggggttctaaggttataatattttgttccacaaag
aggttatgtgaccagcttgctcgtagtattggccggacttttggggctgctgcaattcat
ggcgacaagtctcaaggtgagagagactgggttttaggtcagttccggactgggaagtca
ccaattctggttgcgactgatgttgcagctcgtgggcttgatattaaggatataagggtg
gtgatcaattatgatttccccactggaattgaggactatgtgcaccgtataggaagaact
ggaagggcgggtgctactggagtgtcatatacctttttctctgagcaggactggaaacat
gcgggtgatttaatcaaagttttagagggtgctaatcagcacgtgcttccagagttaaga
cagatggctttgcgtgggccatcaaactttggaaaggatcgaggtgggatgagtcgattt
gactctggtggtggtggtggtgggcgctgggatactggtggtcgtggtggctttggtggt
cgtggaggtggcatgagggatggcagttttggtggacgtggcagtggctttgggggacgt
ggtggcggcattagggatggtggttttggtggacgtggcggtggctttggtggtcgtggt
ggcatgagggatggaggtagtgggcaaggtgggcgaggtgatttctttcctggtaggggc
aacaggggtaggggatccggtggccctcgtgggggtcatgttggttggggtaggggtgaa
cgtggtatggatgatcggtacaacatggaggggcgtggacaaggtcgtggacgtggaaga
tttgacaatagaagagatgtttcttccaaaggtagaggcagaagtcatagtcgtagccct
gaaagagtccgaacatgggactatagcaaaagtagcagcagaagtcgtagcagaagtaga
agcaggagttggagcaggggccgtagtcgaagccgcagctggtctcgtggtcgtagtcgc
agctatagccgtagtattagtccacgtcgtagtcgtagccgtagccgtggtcgaagttac
agccgcagtcgtagccgcagccccagttatgataggcgtgataggtcagatcaacaactt
cctgatcaaaaggatatcagggcgcatgaagtaggaacttcagatccaagaatgcttccc
gtgtcttctggtcttggcacacaagggaattcgtttttgggaactgaacaagtggagcag
caacctattgttagtagcactgatccaggtaatccagaagctgtagcagaccttagtcat
caatcagtttctgatatttag
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integrated database retrieval system
