Glycine soja (wild soybean): 114367964
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Entry
114367964 CDS
T06057
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH5, mitochondrial-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
gsj
Glycine soja (wild soybean)
Pathway
gsj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gsj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114367964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gsj03019
]
114367964
03012 Translation factors [BR:
gsj03012
]
114367964
Enzymes [BR:
gsj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114367964
Messenger RNA biogenesis [BR:
gsj03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114367964
Translation factors [BR:
gsj03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114367964
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
dsrm
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
NACHT
ATPase
T2SSE
Rad17
Motif
Other DBs
NCBI-GeneID:
114367964
NCBI-ProteinID:
XP_028181055
LinkDB
All DBs
Position
9:25921243..25966270
Genome browser
AA seq
1102 aa
AA seq
DB search
MSSRLPFLAMNSHRPVQVAAADNGVNRDVEFGASSLPSDFPCDYWKQKLSMFLDDKSKQE
LISREKKDRRDFQKIEALATKMGLFSHMYAKVVVVSKVPLPNYRYDLDDKRPLREVNLPT
TMLRRVDEYLQEYLTQKSRMKESFPDMWSARSANNGNIGTDERVFDPPRSLASSRAVVGK
ILCQRSLQMCDQQRAWQESPEGRTILEFRSSLPAYKEKEAILSAILRNQVLIISGETGCG
KTTQLPQFILESEIESVRGAVCNIICTQPRRIAAISVSERVAFERGEKLGESVGYKVRLE
GMRGRDTHLLFCTTGILLRRLLDDRNLIGVTHIIVDEIHERGMNEDFLLIVLKDLLARRP
ELKLILMSATLDAELFSSYFNGAATMKIPGFTYPVRTQFLEDILEMSGYRLTPDNQIDDY
GQERIWKMNKQAPRKRKSQIASSVEDALRAADLSDYSLQTRESLSCWYPDCIGFNLIQYI
LCNICEHERPGAILVFMIGWDDINALKEKLLTHPVLSDPSRVLLLMCHSSMDSLEQRLIF
EEPEDGVRKIVLATNIAETSITINDIVFVLDCGKAKKSSYDALNNTPCLLPTWISKVSVQ
QRRGRAGRVQPGECYHLYPRCVYDSFAEHQLPEILRMPLQSLCLQIKSLKLGSISEFLSR
ALQSPEILAVQKAIEYLKTIGALDENENLTILGHNLTMLPMEPKLGKMLIFGVIFNCLDP
ILTIVAGLSVRDPFLTPLDKKDLAEAAKSQFSQDYSDHLAIVRAYEGWKDAEKDLNGHEY
CWKNFLSAQSMRVIDALRMEFLSLLKDIGLVDSNTSSCNAWSYDMYLIRAAVCYGLYPGI
CSVVHKDTSFSLKTMEDGQVLLHSNSVNARETRIPYPWVVFNEKIKVNSVFLRDSTAVPD
SVVLLLGGSISKGDTDGHLKMSGGYLEFFMKPAVANMYQSIRKELDNLIRSKLQFPLMSI
YSFHELLFAIRLLICNDKCEGRFVFSCQLLKPSMMALQQASVSRTDSGPGGDNSKSQLQT
LLTRAGYGAPFYSTKQLKNNQFQATVEFNGVQIMGQPYINKKNAEKDAAAEALQWLMGRR
ETGNEDINHMTMLLKKSKKDHN
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcgccttccatttctcgccatgaattctcaccgtcccgttcaggttgctgct
gctgacaacggggttaatcgtgatgttgaatttggggcttcttcactaccaagtgatttc
ccctgtgattactggaagcagaaattaagcatgtttttagatgacaagagtaagcaagag
ttgatttcaagggagaaaaaggataggcgtgattttcagaaaatagaggctttggcaacc
aaaatggggttgtttagccatatgtatgcgaaagttgttgttgtcagtaaagtccctctt
ccaaactacagatatgatttggacgataaacggccattgagggaggtgaacctacctact
actatgttaaggcgagttgatgaatatcttcaagaatacctaacccaaaagtcaagaatg
aaggaaagctttccagatatgtggtctgcaagatcagccaataacggtaatattggtaca
gatgaaagggtttttgatccacctcggtcactagcatccagtagggctgtagtggggaaa
attctctgtcaaagaagtttacaaatgtgtgatcagcaacgagcttggcaggaatctcca
gaaggaagaacaattctggaatttcgtagtagtctacctgcttataaagagaaggaagca
atattatcagccatattaaggaatcaggtacttatcatttcaggtgaaacaggttgtgga
aagacaacacaacttccacaatttatcctagaatccgagattgaatcagttcgtggagct
gtgtgtaatattatatgcacacaaccaagacgcattgcagcaatttctgtttctgaaaga
gttgcctttgaaagaggagagaaattgggtgaatctgttggatataaagttagacttgaa
ggtatgagagggagagatactcatcttctcttttgcaccacaggcatcttattaagaaga
ttactagatgatagaaacttaataggtgtaactcatattattgttgatgaaattcatgag
cgtggaatgaatgaagattttctcctcattgttcttaaagatctcctagcccgccgacca
gaactgaaactgattttaatgagtgctacccttgatgctgagctgttctcttcatatttt
aatggtgctgcaactatgaagattccaggtttcacataccctgttagaactcaatttttg
gaggatattctggaaatgtcgggctacagattgactcctgacaatcaaattgatgactat
ggtcaagaaaggatttggaaaatgaacaaacaggccccaagaaagaggaaaagccaaatt
gcttcttctgtagaggatgcattacgagcggctgatttaagtgattatagtctgcaaaca
agggagtctttgtcttgttggtatcctgactgtattggttttaacctcattcaatatatc
ttgtgcaatatatgcgagcatgaaagaccaggtgctattttggtttttatgattggatgg
gatgatataaatgctctgaaggagaagctcctaactcatcctgtcttgagtgatcctagc
cgagttttattgctgatgtgccatagctcaatggacagtttggagcagaggttaatattt
gaggaacctgaagatggagtacgaaaaatagtgctagcaacaaatattgctgaaactagt
atcacaataaatgatattgtttttgttcttgactgtgggaaggcgaaaaaatcatcatat
gatgcactgaacaacacgccttgtttgcttcccacctggatctctaaggtttcagttcaa
caaagaagaggaagagctggtcgtgttcaaccaggagaatgttatcatctctatcctaga
tgtgtatatgattcttttgcagagcatcaattacctgaaattttgaggatgcccttgcaa
tctctctgtctgcaaataaaaagtttgaaactaggaagtatatctgagttcttgtctagg
gctttgcagtcacccgagatacttgcggtgcaaaaagcaattgaatatttaaaaacaatt
ggagctttggatgagaatgagaatctgactattctagggcacaacttgacaatgcttccc
atggaacccaaacttggcaagatgcttatatttggtgttatcttcaattgcctggatccc
atattaactattgttgctggccttagtgttagagatccttttctaacacctttggataaa
aaagatcttgcagaggcagcaaagtctcaattttcccaagattacagtgaccatcttgcc
attgtgagggcctatgagggatggaaggatgctgaaaaagaccttaatggacatgaatat
tgctggaaaaattttctttctgctcaatccatgagagttattgatgctcttcgaatggaa
ttcttatccctgctcaaagatattgggttagttgatagcaatacgagcagctgcaatgct
tggagctatgatatgtatctcatacgagcagctgtttgctatggcctatatcctggaatt
tgctcggttgtgcataaggatacgtcattttctctaaaaacaatggaggatggccaagtg
ctcctacattcgaattcagtgaatgctcgggaaactagaattccatatccatgggtagtt
tttaatgagaagataaaagtgaactctgtatttcttcgtgactcaacagctgtgcctgat
tcagtggtgcttcttttgggtggaagcatctcaaaaggagatacggatggtcacttgaaa
atgtcaggaggatatttggagttttttatgaaacctgccgttgctaacatgtaccagagt
ataaggaaagaacttgacaaccttattcggagtaaactacagtttccgctgatgagcata
tactcattccatgagctcttatttgctatacggttgctgatttgcaatgataaatgtgaa
ggaagatttgtatttagttgccagctccttaaaccatcaatgatggcattgcaacaagca
tcggtttcaagaacagacagtggacccgggggtgataattctaaaagtcagcttcaaacg
ttgctcacacgagctggatatggtgcacccttctacagcactaagcaattgaagaataat
cagtttcaggctaccgttgagtttaatggagtgcagataatgggccaaccctatatcaac
aagaagaatgcagaaaaagatgctgcggctgaggcacttcagtggcttatgggtagaaga
gaaacagggaatgaggatatcaatcacatgacaatgttgctgaagaaaagtaagaaagat
cataattga
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